RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ENHOQ6UWT2 76 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 SMIM12Q96EX1 92 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 ST20Q9HBF5 79 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 TRBV20OR9-2A0A075B6H5 130 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.28□□□□□ -2.04
HTT-210ENST00000512909 IGHV6-1A0A0B4J1U7 121 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 IGKV2-29A2NJV5 120 aaPredicted RBP2.28□□□□□ -2.04
HTT-210ENST00000512909 TMEM250H0YL14 139 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 I3L3M4 83 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 WFDC2Q14508 124 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 TEX261Q6UWH6 196 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 GATD1Q8NB37 220 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 C1orf64Q8NEQ6 169 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 RPL39LQ96EH5 51 aaKnown RBP2.28□□□□□ -2.04
HTT-210ENST00000512909 FAM210AQ96ND0 272 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 DNAH9Q9NYC9 4486 aa2.28□□□□□ -2.04
HTT-210ENST00000512909 SDHAF1A6NFY7 115 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 HIGD1CA8MV81 97 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 NCR2O95944 276 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 CKS2P33552 79 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 SS18Q15532 418 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 MIAQ16674 131 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 MRPL54Q6P161 138 aaKnown RBP2.27□□□□□ -2.05
HTT-210ENST00000512909 AMN1Q8IY45 258 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 TSKUQ8WUA8 353 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 OSTCQ9NRP0 149 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 NAT8Q9UHE5 227 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 NAT8BQ9UHF3 227 aa2.27□□□□□ -2.05
HTT-210ENST00000512909 HUWE1Q7Z6Z7 4374 aaKnown RBP2.27□□□□□ -2.05
HTT-210ENST00000512909 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.26□□□□□ -2.05
HTT-210ENST00000512909 LOC389332A0A1B0GUA5 103 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 F8W036 122 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 OXTP01178 125 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 S100A8P05109 93 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 LINC00694P0DN24 101 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 FGF6P10767 208 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 XCL1P47992 114 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 SMAGPQ0VAQ4 97 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 IQCJQ1A5X6 159 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 Q5VSD8 79 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 NUP35Q8NFH5 326 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 OR5A1Q8NGJ0 315 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 TMEM242Q9NWH2 141 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 CSMD3Q7Z407 3707 aa2.26□□□□□ -2.05
HTT-210ENST00000512909 DNAH7Q8WXX0 4024 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 IGHV3-64A0A075B6Q5 118 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 CCL25O15444 150 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 PPP1R17O96001 155 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 MT-ND4LP03901 98 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 TAL2Q16559 108 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 MRPL51Q4U2R6 128 aaKnown RBP2.25□□□□□ -2.05
HTT-210ENST00000512909 TMEM136Q6ZRR5 245 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 FA2HQ7L5A8 372 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 ZNF664Q8N3J9 261 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 LINC00526Q96FQ7 95 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 MRAP2Q96G30 205 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 ANAPC13Q9BS18 74 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 TMEM70Q9BUB7 260 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 TMEM191AQ9H0A3 160 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 CHTOPQ9Y3Y2 248 aaKnown RBP2.25□□□□□ -2.05
HTT-210ENST00000512909 TRAPPC1Q9Y5R8 145 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 V9GYV3 84 aa2.25□□□□□ -2.05
HTT-210ENST00000512909 LINC00959A0A1B0GUT2 108 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 SMIM27A0A1W2PRY6 76 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 K7ERS5 55 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 SCGB1C2P0DMR2 95 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 HBBP68871 147 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 FAM104BQ5XKR9 115 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 C5orf38Q86SI9 138 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 LINC00304Q8N9R0 145 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 PRELID3AQ96N28 172 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 SMDT1Q9H4I9 107 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 MUC4Q99102 2169 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
HTT-210ENST00000512909 KMT2CQ8NEZ4 4911 aaKnown RBP2.24□□□□□ -2.05
HTT-210ENST00000512909 RYR3Q15413 4870 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 TRBV6-5A0A0K0K1A5 114 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 A0A1B0GW15 77 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 C7orf77A4D0Y5 90 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 LINC00862A6NCI5 91 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 C1orf196B1AJZ1 125 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 D6R8Y8 96 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 ZNF25P17030 456 aaPredicted RBP2.23□□□□□ -2.05
HTT-210ENST00000512909 S100PP25815 95 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 POLR2KP53803 58 aaKnown RBP2.23□□□□□ -2.05
HTT-210ENST00000512909 RPL37AP61513 92 aaKnown RBP2.23□□□□□ -2.05
HTT-210ENST00000512909 COX6A2Q02221 97 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 VAMP3Q15836 100 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 SCXQ7RTU7 201 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 C9orf163Q8N9P6 203 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 YPEL4Q96NS1 127 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms