RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 Q8IZM0 81 aa10.53□□□□□ -0.72
SMN2-210ENST00000511812 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
SMN2-210ENST00000511812 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
SMN2-210ENST00000511812 CST9LQ9H4G1 147 aa10.52□□□□□ -0.73
SMN2-210ENST00000511812 NDUFC2-KCTD14E9PQ53 114 aa10.5□□□□□ -0.73
SMN2-210ENST00000511812 HBDP02042 147 aa10.5□□□□□ -0.73
SMN2-210ENST00000511812 NDUFA6P56556 154 aa10.5□□□□□ -0.73
SMN2-210ENST00000511812 HERC1Q15751 4861 aa10.49□□□□□ -0.73
SMN2-210ENST00000511812 CXCL5P42830 114 aa10.49□□□□□ -0.73
SMN2-210ENST00000511812 H3BRM9 83 aa10.48□□□□□ -0.73
SMN2-210ENST00000511812 PDZD11Q5EBL8 140 aa10.48□□□□□ -0.73
SMN2-210ENST00000511812 PHF5AQ7RTV0 110 aaKnown RBP10.48□□□□□ -0.73
SMN2-210ENST00000511812 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
SMN2-210ENST00000511812 F8VRH5 84 aa10.47□□□□□ -0.73
SMN2-210ENST00000511812 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
SMN2-210ENST00000511812 URB1-AS1Q96HZ7 61 aa10.47□□□□□ -0.73
SMN2-210ENST00000511812 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
SMN2-210ENST00000511812 SMIM1B2RUZ4 78 aa10.46□□□□□ -0.73
SMN2-210ENST00000511812 ATP5LO75964 103 aa10.46□□□□□ -0.73
SMN2-210ENST00000511812 PMCHL1Q16048 86 aa10.46□□□□□ -0.73
SMN2-210ENST00000511812 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.73
SMN2-210ENST00000511812 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
SMN2-210ENST00000511812 PKHD1L1Q86WI1 4243 aa10.46□□□□□ -0.74
SMN2-210ENST00000511812 A0A096LNJ9 63 aa10.45□□□□□ -0.74
SMN2-210ENST00000511812 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
SMN2-210ENST00000511812 YPEL4Q96NS1 127 aa10.45□□□□□ -0.74
SMN2-210ENST00000511812 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
SMN2-210ENST00000511812 CBLN2Q8IUK8 224 aa10.44□□□□□ -0.74
SMN2-210ENST00000511812 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
SMN2-210ENST00000511812 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
SMN2-210ENST00000511812 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
SMN2-210ENST00000511812 IGLC3P0DOY3 106 aa10.43□□□□□ -0.74
SMN2-210ENST00000511812 C1orf137Q5JT78 98 aa10.43□□□□□ -0.74
SMN2-210ENST00000511812 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
SMN2-210ENST00000511812 FAT3Q8TDW7 4589 aa10.42□□□□□ -0.74
SMN2-210ENST00000511812 M0QXV9 152 aa10.42□□□□□ -0.74
SMN2-210ENST00000511812 UBE2BP63146 152 aa10.42□□□□□ -0.74
SMN2-210ENST00000511812 C9orf129Q5T035 196 aaKnown RBP10.42□□□□□ -0.74
SMN2-210ENST00000511812 BAGE3Q86Y29 109 aa10.42□□□□□ -0.74
SMN2-210ENST00000511812 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
SMN2-210ENST00000511812 CHCHD1Q96BP2 118 aaKnown RBP10.42□□□□□ -0.74
SMN2-210ENST00000511812 SERTAD4-AS1Q5TG53 156 aa10.41□□□□□ -0.74
SMN2-210ENST00000511812 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
SMN2-210ENST00000511812 SRSF9Q13242 221 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMN2-210ENST00000511812 HSBP1O75506 76 aa10.38□□□□□ -0.75
SMN2-210ENST00000511812 ZNF22P17026 224 aaPredicted RBP10.38□□□□□ -0.75
SMN2-210ENST00000511812 TRGC2P03986 189 aa10.37□□□□□ -0.75
SMN2-210ENST00000511812 TMEM170BQ5T4T1 132 aa10.37□□□□□ -0.75
SMN2-210ENST00000511812 KRTAP7-1Q8IUC3 87 aa10.37□□□□□ -0.75
SMN2-210ENST00000511812 LINC01600Q96MT4 127 aa10.37□□□□□ -0.75
SMN2-210ENST00000511812 CHTOPQ9Y3Y2 248 aaKnown RBP10.37□□□□□ -0.75
SMN2-210ENST00000511812 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
SMN2-210ENST00000511812 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
SMN2-210ENST00000511812 IFI27L1Q96BM0 104 aa10.36□□□□□ -0.75
SMN2-210ENST00000511812 IGLV5-39A0A0G2JS06 123 aa10.35□□□□□ -0.75
SMN2-210ENST00000511812 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
SMN2-210ENST00000511812 IGLV7-43P04211 117 aa10.35□□□□□ -0.75
SMN2-210ENST00000511812 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
SMN2-210ENST00000511812 KRTAP11-1Q8IUC1 163 aa10.33□□□□□ -0.76
SMN2-210ENST00000511812 DIRC1Q969H9 104 aa10.33□□□□□ -0.76
SMN2-210ENST00000511812 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
SMN2-210ENST00000511812 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
SMN2-210ENST00000511812 PFN2P35080 140 aa10.31□□□□□ -0.76
SMN2-210ENST00000511812 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
SMN2-210ENST00000511812 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
SMN2-210ENST00000511812 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
SMN2-210ENST00000511812 ODF1Q14990 250 aa10.3□□□□□ -0.76
SMN2-210ENST00000511812 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
SMN2-210ENST00000511812 NUPR1O60356 82 aa10.29□□□□□ -0.76
SMN2-210ENST00000511812 NKAPP1Q8N9T2 125 aa10.29□□□□□ -0.76
SMN2-210ENST00000511812 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
SMN2-210ENST00000511812 COLCA2A8K830 154 aa10.28□□□□□ -0.76
SMN2-210ENST00000511812 SERF1AO75920 110 aa10.28□□□□□ -0.76
SMN2-210ENST00000511812 LEPROTL1O95214 131 aa10.28□□□□□ -0.76
SMN2-210ENST00000511812 COX17Q14061 63 aa10.28□□□□□ -0.76
SMN2-210ENST00000511812 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
SMN2-210ENST00000511812 H0Y8G0 127 aa10.27□□□□□ -0.77
SMN2-210ENST00000511812 TMEM223A0PJW6 202 aa10.26□□□□□ -0.77
SMN2-210ENST00000511812 H0Y9J4 135 aa10.26□□□□□ -0.77
SMN2-210ENST00000511812 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
SMN2-210ENST00000511812 HSPB8Q9UJY1 196 aa10.25□□□□□ -0.77
SMN2-210ENST00000511812 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
SMN2-210ENST00000511812 GAGE10A6NGK3 116 aa10.24□□□□□ -0.77
SMN2-210ENST00000511812 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
SMN2-210ENST00000511812 RPL37AP8A6NKH3 93 aa10.23□□□□□ -0.77
SMN2-210ENST00000511812 ZNF861PO60384 105 aa10.23□□□□□ -0.77
SMN2-210ENST00000511812 LINC00158P58513 81 aa10.23□□□□□ -0.77
SMN2-210ENST00000511812 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
SMN2-210ENST00000511812 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
SMN2-210ENST00000511812 FABP4P15090 132 aa10.22□□□□□ -0.77
SMN2-210ENST00000511812 LINC00310P59036 64 aa10.22□□□□□ -0.77
SMN2-210ENST00000511812 ATP6V1G1O75348 118 aa10.21□□□□□ -0.77
SMN2-210ENST00000511812 BCE1O60756 84 aa10.2□□□□□ -0.78
SMN2-210ENST00000511812 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
SMN2-210ENST00000511812 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
SMN2-210ENST00000511812 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
SMN2-210ENST00000511812 SCO1O75880 301 aa10.19□□□□□ -0.78
SMN2-210ENST00000511812 PLNP26678 52 aa10.19□□□□□ -0.78
SMN2-210ENST00000511812 LINC00587B1AMM8 73 aa10.18□□□□□ -0.78
SMN2-210ENST00000511812 VPREB1P12018 145 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms