RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 LINC01549A6NIU2 74 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 HERVK_113P63121 156 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 Q6ZRP5 223 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 FA2HQ7L5A8 372 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 CDKN2A-AS1Q9UH64 79 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 TRAPPC1Q9Y5R8 145 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 SEC11AP67812 179 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
SH3RF1-205ENST00000511421 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.26
SH3RF1-205ENST00000511421 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
SH3RF1-205ENST00000511421 YPEL4Q96NS1 127 aa7.21□□□□□ -1.26
SH3RF1-205ENST00000511421 GEMIN7Q9H840 131 aaKnown RBP7.21□□□□□ -1.26
SH3RF1-205ENST00000511421 SMCO4Q9NRQ5 59 aa7.21□□□□□ -1.26
SH3RF1-205ENST00000511421 A0A096LNJ9 63 aa7.2□□□□□ -1.26
SH3RF1-205ENST00000511421 Q8IZM0 81 aa7.2□□□□□ -1.26
SH3RF1-205ENST00000511421 C12orf57Q99622 126 aa7.2□□□□□ -1.26
SH3RF1-205ENST00000511421 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
SH3RF1-205ENST00000511421 TINCRA0A1B0GVN0 87 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 ODF1Q14990 250 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 IGLV5-45A0A087WSX0 123 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 FAM168BA1KXE4 195 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 SCO1O75880 301 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 PRSS2P07478 247 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 PMVKQ15126 192 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 PHF5AQ7RTV0 110 aaKnown RBP7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
SH3RF1-205ENST00000511421 NDUFC2-KCTD14E9PQ53 114 aa7.18□□□□□ -1.26
SH3RF1-205ENST00000511421 LINC00614P0C842 121 aa7.18□□□□□ -1.26
SH3RF1-205ENST00000511421 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
SH3RF1-205ENST00000511421 KRTAP7-1Q8IUC3 87 aa7.18□□□□□ -1.26
SH3RF1-205ENST00000511421 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
SH3RF1-205ENST00000511421 CKS1BP61024 79 aa7.17□□□□□ -1.26
SH3RF1-205ENST00000511421 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 C9orf129Q5T035 196 aaKnown RBP7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 PSORS1C2Q9UIG4 136 aa7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 TNXBP22105 4242 aa7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 SMIM6P0DI80 62 aa7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 SPINK6Q6UWN8 80 aa7.16□□□□□ -1.26
SH3RF1-205ENST00000511421 F8VRH5 84 aa7.15□□□□□ -1.27
SH3RF1-205ENST00000511421 HBDP02042 147 aa7.15□□□□□ -1.27
SH3RF1-205ENST00000511421 FAM19A5Q7Z5A7 132 aaPredicted RBP7.15□□□□□ -1.27
SH3RF1-205ENST00000511421 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.27
SH3RF1-205ENST00000511421 SPINK8P0C7L1 97 aa7.14□□□□□ -1.27
SH3RF1-205ENST00000511421 IGLC3P0DOY3 106 aa7.14□□□□□ -1.27
SH3RF1-205ENST00000511421 CXCL5P42830 114 aa7.14□□□□□ -1.27
SH3RF1-205ENST00000511421 RAB5BP61020 215 aa7.14□□□□□ -1.27
SH3RF1-205ENST00000511421 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
SH3RF1-205ENST00000511421 COX7B2Q8TF08 81 aa7.14□□□□□ -1.27
SH3RF1-205ENST00000511421 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 LINC01600Q96MT4 127 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 M0QXV9 152 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 ATP5LO75964 103 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 AKR1D1P51857 326 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 NDUFA6P56556 154 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
SH3RF1-205ENST00000511421 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
SH3RF1-205ENST00000511421 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
SH3RF1-205ENST00000511421 H3BRM9 83 aa7.11□□□□□ -1.27
SH3RF1-205ENST00000511421 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
SH3RF1-205ENST00000511421 XAGE1AQ9HD64 81 aa7.11□□□□□ -1.27
SH3RF1-205ENST00000511421 CHCHD1Q96BP2 118 aaKnown RBP7.1□□□□□ -1.27
SH3RF1-205ENST00000511421 IGLV7-43P04211 117 aa7.09□□□□□ -1.27
SH3RF1-205ENST00000511421 REG3GQ6UW15 175 aa7.09□□□□□ -1.27
SH3RF1-205ENST00000511421 BAGE3Q86Y29 109 aa7.09□□□□□ -1.27
SH3RF1-205ENST00000511421 C11orf86A6NJI1 115 aa7.09□□□□□ -1.27
SH3RF1-205ENST00000511421 C22orf24Q9Y442 160 aa7.09□□□□□ -1.27
SH3RF1-205ENST00000511421 TRGC2P03986 189 aa7.08□□□□□ -1.28
SH3RF1-205ENST00000511421 KRTAP10-8P60410 259 aa7.08□□□□□ -1.28
SH3RF1-205ENST00000511421 UBE2BP63146 152 aa7.07□□□□□ -1.28
SH3RF1-205ENST00000511421 IFI27L1Q96BM0 104 aa7.06□□□□□ -1.28
SH3RF1-205ENST00000511421 TRAV12-1A0A0B4J245 112 aa7.06□□□□□ -1.28
SH3RF1-205ENST00000511421 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
SH3RF1-205ENST00000511421 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
SH3RF1-205ENST00000511421 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
SH3RF1-205ENST00000511421 TP73-AS1Q9UF72 201 aa7.06□□□□□ -1.28
SH3RF1-205ENST00000511421 COLCA2A8K830 154 aa7.05□□□□□ -1.28
SH3RF1-205ENST00000511421 LINC00310P59036 64 aa7.05□□□□□ -1.28
SH3RF1-205ENST00000511421 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
SH3RF1-205ENST00000511421 HSBP1O75506 76 aa7.04□□□□□ -1.28
SH3RF1-205ENST00000511421 MRPL55Q7Z7F7 128 aaKnown RBP7.04□□□□□ -1.28
SH3RF1-205ENST00000511421 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
SH3RF1-205ENST00000511421 H0Y9J4 135 aa7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 SERF1AO75920 110 aa7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 PFN2P35080 140 aa7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
SH3RF1-205ENST00000511421 LINC00167Q96N53 147 aa7.02□□□□□ -1.29
SH3RF1-205ENST00000511421 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
SH3RF1-205ENST00000511421 NUPR1O60356 82 aa7.01□□□□□ -1.29
SH3RF1-205ENST00000511421 COX17Q14061 63 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms