RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 PRELID3AQ96N28 172 aa2.22□□□□□ -2.05
UBE2D3-226ENST00000508635 YPEL4Q96NS1 127 aa2.22□□□□□ -2.05
UBE2D3-226ENST00000508635 CHAC1Q9BUX1 264 aa2.22□□□□□ -2.05
UBE2D3-226ENST00000508635 TIMM21Q9BVV7 248 aa2.22□□□□□ -2.05
UBE2D3-226ENST00000508635 CDC42SE2Q9NRR3 84 aa2.22□□□□□ -2.05
UBE2D3-226ENST00000508635 K7EMI3 77 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 UBE2L6O14933 153 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 CCL25O15444 150 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 SNAPINO95295 136 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 NPYP01303 97 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 APOC3P02656 99 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 APCSP02743 223 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 KRTAP12-2P59991 146 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 KRTAP10-8P60410 259 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 NDUFA5Q16718 116 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 COX19Q49B96 90 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 CLPSL2Q6UWE3 100 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 ZNF664Q8N3J9 261 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 Q8N8P6 123 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 OR5A1Q8NGJ0 315 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 DEFB104AQ8WTQ1 72 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 KIR2DL4Q99706 377 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 SMIM2Q9BVW6 85 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
UBE2D3-226ENST00000508635 MYCBP2O75592 4640 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 LINC00959A0A1B0GUT2 108 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 IGKV2-29A2NJV5 120 aaPredicted RBP2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 IGIPA6NJ69 53 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 S100PP25815 95 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 G0S2P27469 103 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 IFI27P40305 119 aaPredicted RBP2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 CNBPP62633 177 aaKnown RBP2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 MRPS36P82909 103 aaKnown RBP2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 SMAGPQ0VAQ4 97 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 AMMECR1LQ6DCA0 310 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 SDIM1Q6ZPB5 146 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 KRTAP11-1Q8IUC1 163 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 C9orf163Q8N9P6 203 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 MAP1LC3AQ9H492 121 aa2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 NXT2Q9NPJ8 142 aaKnown RBP2.2□□□□□ -2.06
UBE2D3-226ENST00000508635 TGIF2-C20orf24A0A0A6YYL0 155 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 IGHV3OR16-9A0A0B4J2B5 98 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 LOC389332A0A1B0GUA5 103 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 COLCA2A8K830 154 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 C1orf196B1AJZ1 125 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 PANO1I0J062 215 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 MT-ND6P03923 174 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 RAB5AP20339 215 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 FCER1GP30273 86 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 RPL39P62891 51 aaKnown RBP2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 FABP9Q0Z7S8 132 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 CIRBPQ14011 172 aaKnown RBP2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 RNASEKQ6P5S7 137 aaKnown RBP2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 CHCHD10Q8WYQ3 142 aaPredicted RBP2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 TMEM101Q96IK0 257 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 AMELXQ99217 191 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 SMCO4Q9NRQ5 59 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 SPANXA1Q9NS26 97 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 TRAPPC1Q9Y5R8 145 aa2.19□□□□□ -2.06
UBE2D3-226ENST00000508635 HMCN2Q8NDA2 5059 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 IGHV3-64A0A075B6Q5 118 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 IGKV3OR2-268A0A0C4DH90 116 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 LINC01549A6NIU2 74 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 OXTP01178 125 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 LINC00614P0C842 121 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 HNRNPA3P51991 378 aaKnown RBP2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 RPL37AP61513 92 aaKnown RBP2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 SS18Q15532 418 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 ORMDL2Q53FV1 153 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 C2orf66Q6UXQ4 117 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 FAM19A3Q7Z5A8 133 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 C15orf56Q8N910 161 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 TOMM6Q96B49 74 aa2.18□□□□□ -2.06
UBE2D3-226ENST00000508635 A0A096LNJ9 63 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 GVQW2A0A096LPI5 108 aaPredicted RBP2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 IGHV1-58A0A0C4DH39 117 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 CHTF8P0CG12 524 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 XCL1P47992 114 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 UBE2D1P51668 147 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 COX6A2Q02221 97 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 C9orf129Q5T035 196 aaKnown RBP2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 Q6ZUT4 128 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 LINC00173Q6ZV60 143 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 ERASQ7Z444 233 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 CBLN2Q8IUK8 224 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 LINC01561Q8N1V8 128 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 C18orf32Q8TCD1 76 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 DPH3Q96FX2 82 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 TMEM141Q96I45 108 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 TIMM17AQ99595 171 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 VCX2Q9H322 139 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 CST9LQ9H4G1 147 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 PLAC8Q9NZF1 115 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 CYSLTR1Q9Y271 337 aa2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 LRP1Q07954 4544 aaKnown RBP2.17□□□□□ -2.06
UBE2D3-226ENST00000508635 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms