RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 XCL1P47992 114 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
NEDD9-211ENST00000508546 GAGE2BQ13066 116 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 PRR4Q16378 134 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 C1orf137Q5JT78 98 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 LINC00173Q6ZV60 143 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 MAP1LC3CQ9BXW4 147 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-211ENST00000508546 IGKV2-29A2NJV5 120 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-211ENST00000508546 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
NEDD9-211ENST00000508546 C9orf116Q5BN46 136 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-211ENST00000508546 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 C20orf202A1L168 122 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 H0Y9J4 135 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 I3L3M4 83 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 G0S2P27469 103 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 CD164L2Q6UWJ8 174 aa5.66□□□□□ -1.5
NEDD9-211ENST00000508546 LINC01549A6NIU2 74 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 H0Y8G0 127 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 ATP5LO75964 103 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 APOMO95445 188 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 TSHBP01222 138 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 SS18Q15532 418 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 PET117Q6UWS5 81 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 C2orf66Q6UXQ4 117 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 PHF5AQ7RTV0 110 aaKnown RBP5.65□□□□□ -1.5
NEDD9-211ENST00000508546 TOMM6Q96B49 74 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 TMEM101Q96IK0 257 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 CYSLTR1Q9Y271 337 aa5.65□□□□□ -1.5
NEDD9-211ENST00000508546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-211ENST00000508546 S100A12P80511 92 aa5.64□□□□□ -1.51
NEDD9-211ENST00000508546 TEX43Q6ZNM6 134 aa5.64□□□□□ -1.51
NEDD9-211ENST00000508546 RPL13AP40429 203 aaKnown RBP5.63□□□□□ -1.51
NEDD9-211ENST00000508546 LINC01545Q5VT33 79 aa5.63□□□□□ -1.51
NEDD9-211ENST00000508546 C2orf48Q96LS8 159 aa5.63□□□□□ -1.51
NEDD9-211ENST00000508546 SCGB3A1Q96QR1 104 aa5.63□□□□□ -1.51
NEDD9-211ENST00000508546 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
NEDD9-211ENST00000508546 VAMP8Q9BV40 100 aa5.63□□□□□ -1.51
NEDD9-211ENST00000508546 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
NEDD9-211ENST00000508546 RPL39P62891 51 aaKnown RBP5.62□□□□□ -1.51
NEDD9-211ENST00000508546 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
NEDD9-211ENST00000508546 RNF151Q2KHN1 245 aa5.62□□□□□ -1.51
NEDD9-211ENST00000508546 Q6ZN92 141 aa5.62□□□□□ -1.51
NEDD9-211ENST00000508546 ERASQ7Z444 233 aa5.62□□□□□ -1.51
NEDD9-211ENST00000508546 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
NEDD9-211ENST00000508546 A0A087WZ39 114 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 COX7A2LO14548 114 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 MALP21145 153 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 UBE2D1P51668 147 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 ATOH7Q8N100 152 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 TIMM17AQ99595 171 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
NEDD9-211ENST00000508546 IGIPA6NJ69 53 aa5.6□□□□□ -1.51
NEDD9-211ENST00000508546 KRTAP11-1Q8IUC1 163 aa5.6□□□□□ -1.51
NEDD9-211ENST00000508546 PAM16Q9Y3D7 125 aa5.6□□□□□ -1.51
NEDD9-211ENST00000508546 TRAV12-1A0A0B4J245 112 aa5.59□□□□□ -1.51
NEDD9-211ENST00000508546 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
NEDD9-211ENST00000508546 TSTD3H0UI37 97 aa5.59□□□□□ -1.51
NEDD9-211ENST00000508546 SPATA45Q537H7 98 aa5.59□□□□□ -1.51
NEDD9-211ENST00000508546 OPRPNQ99935 248 aaPredicted RBP5.59□□□□□ -1.51
NEDD9-211ENST00000508546 SPANXA1Q9NS26 97 aa5.59□□□□□ -1.51
NEDD9-211ENST00000508546 MUC17Q685J3 4493 aa5.59□□□□□ -1.52
NEDD9-211ENST00000508546 PCP4L1A6NKN8 68 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 F8VRH5 84 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 F8WDY8 70 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 DPM2O94777 84 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 NPSP0C0P6 89 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 PLNP26678 52 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 PMVKQ15126 192 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 PAPPA-AS1Q5QFB9 102 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 PRO1933Q9H354 126 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
NEDD9-211ENST00000508546 UBE2D4Q9Y2X8 147 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 CHTOPQ9Y3Y2 248 aaKnown RBP5.58□□□□□ -1.52
NEDD9-211ENST00000508546 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
NEDD9-211ENST00000508546 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
NEDD9-211ENST00000508546 IGLV4-3A0A075B6K6 122 aa5.57□□□□□ -1.52
NEDD9-211ENST00000508546 FAM168BA1KXE4 195 aa5.57□□□□□ -1.52
NEDD9-211ENST00000508546 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-211ENST00000508546 IGKCP01834 107 aa5.57□□□□□ -1.52
NEDD9-211ENST00000508546 SPAG11BQ08648 103 aa5.57□□□□□ -1.52
NEDD9-211ENST00000508546 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
NEDD9-211ENST00000508546 Q6ZUT4 128 aa5.56□□□□□ -1.52
NEDD9-211ENST00000508546 C5orf38Q86SI9 138 aa5.56□□□□□ -1.52
NEDD9-211ENST00000508546 CST9LQ9H4G1 147 aa5.56□□□□□ -1.52
NEDD9-211ENST00000508546 TRAV13-1A0A0B4J241 112 aa5.55□□□□□ -1.52
NEDD9-211ENST00000508546 TSPAN13O95857 204 aa5.55□□□□□ -1.52
NEDD9-211ENST00000508546 MRPS36P82909 103 aaKnown RBP5.55□□□□□ -1.52
NEDD9-211ENST00000508546 ZC2HC1BQ5TFG8 222 aa5.55□□□□□ -1.52
NEDD9-211ENST00000508546 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
NEDD9-211ENST00000508546 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
NEDD9-211ENST00000508546 VCX2Q9H322 139 aa5.55□□□□□ -1.52
NEDD9-211ENST00000508546 M0QXV9 152 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms