RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
RNF4-210ENST00000508235 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
RNF4-210ENST00000508235 DNAH5Q8TE73 4624 aa9.55□□□□□ -0.88
RNF4-210ENST00000508235 PANO1I0J062 215 aa9.55□□□□□ -0.88
RNF4-210ENST00000508235 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
RNF4-210ENST00000508235 Q5VSD8 79 aa9.55□□□□□ -0.88
RNF4-210ENST00000508235 A0A087WYN8 130 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 F8VRH5 84 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
RNF4-210ENST00000508235 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
RNF4-210ENST00000508235 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
RNF4-210ENST00000508235 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
RNF4-210ENST00000508235 RYR1P21817 5038 aa9.53□□□□□ -0.88
RNF4-210ENST00000508235 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
RNF4-210ENST00000508235 NUPR1O60356 82 aa9.53□□□□□ -0.88
RNF4-210ENST00000508235 TMEM170BQ5T4T1 132 aa9.53□□□□□ -0.88
RNF4-210ENST00000508235 PLAC8Q9NZF1 115 aa9.53□□□□□ -0.88
RNF4-210ENST00000508235 STPG4Q8N801 248 aa9.52□□□□□ -0.89
RNF4-210ENST00000508235 FABP4P15090 132 aa9.51□□□□□ -0.89
RNF4-210ENST00000508235 KRTAP17-1Q9BYP8 105 aa9.51□□□□□ -0.89
RNF4-210ENST00000508235 HERC2O95714 4834 aa9.51□□□□□ -0.89
RNF4-210ENST00000508235 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
RNF4-210ENST00000508235 H0Y8G0 127 aa9.5□□□□□ -0.89
RNF4-210ENST00000508235 MAP1LC3CQ9BXW4 147 aa9.5□□□□□ -0.89
RNF4-210ENST00000508235 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
RNF4-210ENST00000508235 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
RNF4-210ENST00000508235 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
RNF4-210ENST00000508235 PLNP26678 52 aa9.48□□□□□ -0.89
RNF4-210ENST00000508235 ODF1Q14990 250 aa9.48□□□□□ -0.89
RNF4-210ENST00000508235 COA6Q5JTJ3 125 aaKnown RBP9.48□□□□□ -0.89
RNF4-210ENST00000508235 Q6ZRP5 223 aa9.48□□□□□ -0.89
RNF4-210ENST00000508235 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
RNF4-210ENST00000508235 GAGE2EQ4V326 116 aa9.47□□□□□ -0.89
RNF4-210ENST00000508235 GAGE2DQ9UEU5 116 aa9.47□□□□□ -0.89
RNF4-210ENST00000508235 APOBP04114 4563 aaKnown RBP9.47□□□□□ -0.89
RNF4-210ENST00000508235 TMEM223A0PJW6 202 aa9.46□□□□□ -0.9
RNF4-210ENST00000508235 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
RNF4-210ENST00000508235 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
RNF4-210ENST00000508235 DPM2O94777 84 aa9.44□□□□□ -0.9
RNF4-210ENST00000508235 HSPG2P98160 4391 aa9.44□□□□□ -0.9
RNF4-210ENST00000508235 IGKCP01834 107 aa9.43□□□□□ -0.9
RNF4-210ENST00000508235 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
RNF4-210ENST00000508235 SYS1-DBNDD2H3BUS1 97 aa9.42□□□□□ -0.9
RNF4-210ENST00000508235 INAFM2P0DMQ5 153 aa9.42□□□□□ -0.9
RNF4-210ENST00000508235 HERVK_113P61574 105 aa9.42□□□□□ -0.9
RNF4-210ENST00000508235 COX17Q14061 63 aa9.41□□□□□ -0.9
RNF4-210ENST00000508235 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
RNF4-210ENST00000508235 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
RNF4-210ENST00000508235 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
RNF4-210ENST00000508235 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
RNF4-210ENST00000508235 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
RNF4-210ENST00000508235 PMCHL2Q9BQD1 86 aa9.39□□□□□ -0.91
RNF4-210ENST00000508235 ERG28Q9UKR5 140 aa9.39□□□□□ -0.91
RNF4-210ENST00000508235 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
RNF4-210ENST00000508235 LEPROTO15243 131 aa9.38□□□□□ -0.91
RNF4-210ENST00000508235 PFN2P35080 140 aa9.38□□□□□ -0.91
RNF4-210ENST00000508235 KRTAP10-4P60372 401 aaPredicted RBP9.38□□□□□ -0.91
RNF4-210ENST00000508235 HERV-K104P63124 156 aa9.38□□□□□ -0.91
RNF4-210ENST00000508235 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
RNF4-210ENST00000508235 LINC00587B1AMM8 73 aa9.37□□□□□ -0.91
RNF4-210ENST00000508235 S100A6P06703 90 aa9.37□□□□□ -0.91
RNF4-210ENST00000508235 KRTDAPP60985 99 aa9.37□□□□□ -0.91
RNF4-210ENST00000508235 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
RNF4-210ENST00000508235 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
RNF4-210ENST00000508235 C20orf202A1L168 122 aa9.36□□□□□ -0.91
RNF4-210ENST00000508235 M0QXV9 152 aa9.36□□□□□ -0.91
RNF4-210ENST00000508235 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
RNF4-210ENST00000508235 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
RNF4-210ENST00000508235 S100A2P29034 98 aa9.35□□□□□ -0.91
RNF4-210ENST00000508235 AKR1D1P51857 326 aa9.35□□□□□ -0.91
RNF4-210ENST00000508235 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
RNF4-210ENST00000508235 NDUFA12Q9UI09 145 aa9.35□□□□□ -0.91
RNF4-210ENST00000508235 DNAH8Q96JB1 4490 aa9.35□□□□□ -0.91
RNF4-210ENST00000508235 J3QQQ9 107 aa9.34□□□□□ -0.91
RNF4-210ENST00000508235 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
RNF4-210ENST00000508235 NMUP48645 174 aa9.34□□□□□ -0.91
RNF4-210ENST00000508235 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
RNF4-210ENST00000508235 LINC00158P58513 81 aa9.33□□□□□ -0.92
RNF4-210ENST00000508235 LBHQ53QV2 105 aaPredicted RBP9.33□□□□□ -0.92
RNF4-210ENST00000508235 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
RNF4-210ENST00000508235 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
RNF4-210ENST00000508235 TP73-AS1Q9UF72 201 aa9.33□□□□□ -0.92
RNF4-210ENST00000508235 E9PLD3 99 aa9.32□□□□□ -0.92
RNF4-210ENST00000508235 UBE2BP63146 152 aa9.32□□□□□ -0.92
RNF4-210ENST00000508235 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
RNF4-210ENST00000508235 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
RNF4-210ENST00000508235 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
RNF4-210ENST00000508235 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
RNF4-210ENST00000508235 TSPEAR-AS2P59090 65 aa9.3□□□□□ -0.92
RNF4-210ENST00000508235 RPL24P83731 157 aaKnown RBP9.3□□□□□ -0.92
RNF4-210ENST00000508235 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
RNF4-210ENST00000508235 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
RNF4-210ENST00000508235 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms