RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
RNF4-209ENST00000507784 DLEU1O43261 78 aa11.48□□□□□ -0.57
RNF4-209ENST00000507784 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
RNF4-209ENST00000507784 UNQ6190/PRO20217Q6UXQ8 127 aa11.48□□□□□ -0.57
RNF4-209ENST00000507784 DNAH6Q9C0G6 4158 aa11.47□□□□□ -0.57
RNF4-209ENST00000507784 HERV-K104P63124 156 aa11.47□□□□□ -0.57
RNF4-209ENST00000507784 MEIG1Q5JSS6 88 aa11.47□□□□□ -0.57
RNF4-209ENST00000507784 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
RNF4-209ENST00000507784 MIEN1Q9BRT3 115 aa11.47□□□□□ -0.57
RNF4-209ENST00000507784 A0A0J9YXY3 114 aa11.46□□□□□ -0.57
RNF4-209ENST00000507784 LRCOL1A6NCL2 159 aa11.46□□□□□ -0.57
RNF4-209ENST00000507784 C10orf25Q5T742 122 aa11.46□□□□□ -0.57
RNF4-209ENST00000507784 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
RNF4-209ENST00000507784 A0A0U1RRA0 63 aa11.45□□□□□ -0.58
RNF4-209ENST00000507784 SYCNQ0VAF6 134 aa11.45□□□□□ -0.58
RNF4-209ENST00000507784 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.44□□□□□ -0.58
RNF4-209ENST00000507784 F8WDY8 70 aa11.44□□□□□ -0.58
RNF4-209ENST00000507784 HNRNPA3P51991 378 aaKnown RBP11.44□□□□□ -0.58
RNF4-209ENST00000507784 Q6ZRU5 148 aa11.44□□□□□ -0.58
RNF4-209ENST00000507784 A0A087WTM6 91 aa11.43□□□□□ -0.58
RNF4-209ENST00000507784 PFN2P35080 140 aa11.43□□□□□ -0.58
RNF4-209ENST00000507784 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
RNF4-209ENST00000507784 PCP4L1A6NKN8 68 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 RTL8CO15255 209 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 SMIM13P0DJ93 91 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 LINC00158P58513 81 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 C9orf116Q5BN46 136 aaPredicted RBP11.42□□□□□ -0.58
RNF4-209ENST00000507784 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 C6orf48Q9UBA6 75 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 ERG28Q9UKR5 140 aa11.42□□□□□ -0.58
RNF4-209ENST00000507784 EREGO14944 169 aa11.41□□□□□ -0.58
RNF4-209ENST00000507784 TNP2Q05952 138 aa11.41□□□□□ -0.58
RNF4-209ENST00000507784 TRBV30A0A0K0K1B3 111 aa11.4□□□□□ -0.58
RNF4-209ENST00000507784 LINC00587B1AMM8 73 aa11.4□□□□□ -0.58
RNF4-209ENST00000507784 SLPIP03973 132 aa11.4□□□□□ -0.58
RNF4-209ENST00000507784 C2orf91Q6ZV80 131 aa11.4□□□□□ -0.58
RNF4-209ENST00000507784 Q8N814 137 aa11.4□□□□□ -0.58
RNF4-209ENST00000507784 TMEM238C9JI98 176 aa11.39□□□□□ -0.59
RNF4-209ENST00000507784 HIGD1BQ9P298 99 aa11.39□□□□□ -0.59
RNF4-209ENST00000507784 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
RNF4-209ENST00000507784 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
RNF4-209ENST00000507784 TIMM17BO60830 172 aa11.38□□□□□ -0.59
RNF4-209ENST00000507784 SRSF9Q13242 221 aaKnown RBP eCLIP11.38□□□□□ -0.59
RNF4-209ENST00000507784 KMT2AQ03164 3969 aa11.37□□□□□ -0.59
RNF4-209ENST00000507784 DDTP30046 118 aa11.37□□□□□ -0.59
RNF4-209ENST00000507784 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
RNF4-209ENST00000507784 DAND5Q8N907 189 aa11.37□□□□□ -0.59
RNF4-209ENST00000507784 HIST1H4GQ99525 98 aa11.37□□□□□ -0.59
RNF4-209ENST00000507784 NPC2P61916 151 aa11.36□□□□□ -0.59
RNF4-209ENST00000507784 CTAG1AP78358 180 aa11.35□□□□□ -0.59
RNF4-209ENST00000507784 COX17Q14061 63 aa11.35□□□□□ -0.59
RNF4-209ENST00000507784 RNF151Q2KHN1 245 aa11.35□□□□□ -0.59
RNF4-209ENST00000507784 MIR7-3HGQ8N6C7 128 aa11.35□□□□□ -0.59
RNF4-209ENST00000507784 LITAFQ99732 161 aa11.35□□□□□ -0.59
RNF4-209ENST00000507784 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
RNF4-209ENST00000507784 CNBPP62633 177 aaKnown RBP11.34□□□□□ -0.59
RNF4-209ENST00000507784 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
RNF4-209ENST00000507784 SPANXDQ9BXN6 97 aa11.33□□□□□ -0.6
RNF4-209ENST00000507784 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
RNF4-209ENST00000507784 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
RNF4-209ENST00000507784 RPL18AQ02543 176 aaKnown RBP11.32□□□□□ -0.6
RNF4-209ENST00000507784 HSD52Q0P140 79 aa11.32□□□□□ -0.6
RNF4-209ENST00000507784 TAL2Q16559 108 aa11.31□□□□□ -0.6
RNF4-209ENST00000507784 GAGE2EQ4V326 116 aa11.31□□□□□ -0.6
RNF4-209ENST00000507784 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
RNF4-209ENST00000507784 GAGE2DQ9UEU5 116 aa11.31□□□□□ -0.6
RNF4-209ENST00000507784 SACSQ9NZJ4 4579 aa11.3□□□□□ -0.6
RNF4-209ENST00000507784 LOC107984640A0A0U1RRK4 108 aa11.3□□□□□ -0.6
RNF4-209ENST00000507784 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
RNF4-209ENST00000507784 GCSHP23434 173 aa11.3□□□□□ -0.6
RNF4-209ENST00000507784 Q6ZVH6 145 aa11.3□□□□□ -0.6
RNF4-209ENST00000507784 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
RNF4-209ENST00000507784 GAGE2BQ13066 116 aa11.29□□□□□ -0.6
RNF4-209ENST00000507784 LINC00336Q6ZUF6 198 aa11.29□□□□□ -0.6
RNF4-209ENST00000507784 C9orf163Q8N9P6 203 aa11.29□□□□□ -0.6
RNF4-209ENST00000507784 LINC00308Q8TCZ7 52 aa11.29□□□□□ -0.6
RNF4-209ENST00000507784 IFITM1P13164 125 aa11.28□□□□□ -0.6
RNF4-209ENST00000507784 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
RNF4-209ENST00000507784 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
RNF4-209ENST00000507784 Q6ZRP5 223 aa11.28□□□□□ -0.6
RNF4-209ENST00000507784 CEND1Q8N111 149 aa11.28□□□□□ -0.6
RNF4-209ENST00000507784 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
RNF4-209ENST00000507784 SND1-IT1Q9HBX3 110 aa11.28□□□□□ -0.6
RNF4-209ENST00000507784 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
RNF4-209ENST00000507784 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
RNF4-209ENST00000507784 DNAH2Q9P225 4427 aa11.27□□□□□ -0.61
RNF4-209ENST00000507784 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
RNF4-209ENST00000507784 SOSTDC1Q6X4U4 206 aa11.26□□□□□ -0.61
RNF4-209ENST00000507784 RYR2Q92736 4967 aa11.26□□□□□ -0.61
RNF4-209ENST00000507784 RPL24P83731 157 aaKnown RBP11.25□□□□□ -0.61
RNF4-209ENST00000507784 BATFQ16520 125 aa11.25□□□□□ -0.61
RNF4-209ENST00000507784 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
RNF4-209ENST00000507784 M0R143 59 aa11.24□□□□□ -0.61
RNF4-209ENST00000507784 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
RNF4-209ENST00000507784 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
RNF4-209ENST00000507784 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
RNF4-209ENST00000507784 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
RNF4-209ENST00000507784 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
RNF4-209ENST00000507784 A0A096LNI7 61 aa11.22□□□□□ -0.61
RNF4-209ENST00000507784 A4D1N5 150 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms