RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 UNQ6190/PRO20217Q6UXQ8 127 aa15.9■□□□□ 0.14
PVT1-201ENST00000504719 PACRGQ96M98 296 aaPredicted RBP15.9■□□□□ 0.14
PVT1-201ENST00000504719 MRPL35Q9NZE8 188 aaKnown RBP15.9■□□□□ 0.14
PVT1-201ENST00000504719 ATP5LO75964 103 aa15.89■□□□□ 0.13
PVT1-201ENST00000504719 RNF151Q2KHN1 245 aa15.89■□□□□ 0.13
PVT1-201ENST00000504719 PTTG1IPP53801 180 aa15.88■□□□□ 0.13
PVT1-201ENST00000504719 TOMM7Q9P0U1 55 aa15.88■□□□□ 0.13
PVT1-201ENST00000504719 PRSS2P07478 247 aa15.87■□□□□ 0.13
PVT1-201ENST00000504719 IGLV5-45A0A087WSX0 123 aa15.86■□□□□ 0.13
PVT1-201ENST00000504719 HSBP1O75506 76 aa15.86■□□□□ 0.13
PVT1-201ENST00000504719 GAGE2BQ13066 116 aa15.86■□□□□ 0.13
PVT1-201ENST00000504719 C2orf82Q6UX34 121 aa15.86■□□□□ 0.13
PVT1-201ENST00000504719 RPL18AQ02543 176 aaKnown RBP15.85■□□□□ 0.13
PVT1-201ENST00000504719 C6orf48Q9UBA6 75 aa15.85■□□□□ 0.13
PVT1-201ENST00000504719 C6orf226Q5I0X4 101 aa15.84■□□□□ 0.13
PVT1-201ENST00000504719 Q8IZM0 81 aa15.84■□□□□ 0.13
PVT1-201ENST00000504719 FAM19A2Q8N3H0 131 aa15.84■□□□□ 0.13
PVT1-201ENST00000504719 SMIM1B2RUZ4 78 aa15.83■□□□□ 0.12
PVT1-201ENST00000504719 IGLC3P0DOY3 106 aa15.83■□□□□ 0.12
PVT1-201ENST00000504719 SERF1AO75920 110 aa15.82■□□□□ 0.12
PVT1-201ENST00000504719 CKS1BP61024 79 aa15.82■□□□□ 0.12
PVT1-201ENST00000504719 PRR3P79522 188 aaKnown RBP15.82■□□□□ 0.12
PVT1-201ENST00000504719 LINC00310P59036 64 aa15.81■□□□□ 0.12
PVT1-201ENST00000504719 TRBV30A0A0K0K1B3 111 aa15.8■□□□□ 0.12
PVT1-201ENST00000504719 SPINK8P0C7L1 97 aa15.8■□□□□ 0.12
PVT1-201ENST00000504719 IFI27L1Q96BM0 104 aa15.8■□□□□ 0.12
PVT1-201ENST00000504719 H3BRM9 83 aa15.79■□□□□ 0.12
PVT1-201ENST00000504719 SERTAD4-AS1Q5TG53 156 aa15.79■□□□□ 0.12
PVT1-201ENST00000504719 A0A1W2PNN7 141 aa15.78■□□□□ 0.12
PVT1-201ENST00000504719 TLX1NBP0CAT3 122 aa15.78■□□□□ 0.12
PVT1-201ENST00000504719 Q6ZRP5 223 aa15.77■□□□□ 0.12
PVT1-201ENST00000504719 COX7B2Q8TF08 81 aa15.77■□□□□ 0.12
PVT1-201ENST00000504719 NUPR1O60356 82 aa15.76■□□□□ 0.11
PVT1-201ENST00000504719 MT1HL1P0DM35 61 aa15.76■□□□□ 0.11
PVT1-201ENST00000504719 ZNF22P17026 224 aaPredicted RBP15.76■□□□□ 0.11
PVT1-201ENST00000504719 C9orf116Q5BN46 136 aaPredicted RBP15.76■□□□□ 0.11
PVT1-201ENST00000504719 CHTOPQ9Y3Y2 248 aaKnown RBP15.76■□□□□ 0.11
PVT1-201ENST00000504719 TRAV12-1A0A0B4J245 112 aa15.74■□□□□ 0.11
PVT1-201ENST00000504719 C11orf86A6NJI1 115 aa15.74■□□□□ 0.11
PVT1-201ENST00000504719 F8VRH5 84 aa15.73■□□□□ 0.11
PVT1-201ENST00000504719 CXCL5P42830 114 aa15.73■□□□□ 0.11
PVT1-201ENST00000504719 GAGE2EQ4V326 116 aa15.73■□□□□ 0.11
PVT1-201ENST00000504719 GAGE2DQ9UEU5 116 aa15.73■□□□□ 0.11
PVT1-201ENST00000504719 NDUFC2-KCTD14E9PQ53 114 aa15.72■□□□□ 0.11
PVT1-201ENST00000504719 LEPROTL1O95214 131 aa15.72■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BKO60814 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BJP06899 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BOP23527 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BBP33778 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BDP58876 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BCP62807 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST2H2BEQ16778 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.71■□□□□ 0.11
PVT1-201ENST00000504719 TMEM170BQ5T4T1 132 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BHQ93079 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BNQ99877 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 HIST1H2BMQ99879 126 aa15.71■□□□□ 0.11
PVT1-201ENST00000504719 IGLV5-39A0A0G2JS06 123 aa15.69■□□□□ 0.1
PVT1-201ENST00000504719 H0Y8G0 127 aa15.68■□□□□ 0.1
PVT1-201ENST00000504719 FABP4P15090 132 aa15.68■□□□□ 0.1
PVT1-201ENST00000504719 SPINK6Q6UWN8 80 aa15.68■□□□□ 0.1
PVT1-201ENST00000504719 SRSF9Q13242 221 aaKnown RBP eCLIP15.67■□□□□ 0.14e-6■■■■□ 20.8
PVT1-201ENST00000504719 HSPB8Q9UJY1 196 aa15.67■□□□□ 0.1
PVT1-201ENST00000504719 FAM168BA1KXE4 195 aa15.66■□□□□ 0.1
PVT1-201ENST00000504719 S100A1P23297 94 aa15.66■□□□□ 0.1
PVT1-201ENST00000504719 PHF5AQ7RTV0 110 aaKnown RBP15.66■□□□□ 0.1
PVT1-201ENST00000504719 TNXBP22105 4242 aa15.66■□□□□ 0.1
PVT1-201ENST00000504719 HMCN2Q8NDA2 5059 aa15.65■□□□□ 0.1
PVT1-201ENST00000504719 ATP6V1G1O75348 118 aa15.64■□□□□ 0.09
PVT1-201ENST00000504719 LINC01600Q96MT4 127 aa15.64■□□□□ 0.09
PVT1-201ENST00000504719 ODF1Q14990 250 aa15.63■□□□□ 0.09
PVT1-201ENST00000504719 C9orf129Q5T035 196 aaKnown RBP15.63■□□□□ 0.09
PVT1-201ENST00000504719 PSORS1C2Q9UIG4 136 aa15.63■□□□□ 0.09
PVT1-201ENST00000504719 FAM19A5Q7Z5A7 132 aaPredicted RBP15.62■□□□□ 0.09
PVT1-201ENST00000504719 TMEM223A0PJW6 202 aa15.61■□□□□ 0.09
PVT1-201ENST00000504719 PLA2G2DQ9UNK4 145 aa15.61■□□□□ 0.09
PVT1-201ENST00000504719 REG3GQ6UW15 175 aa15.59■□□□□ 0.09
PVT1-201ENST00000504719 XAGE1AQ9HD64 81 aa15.59■□□□□ 0.09
PVT1-201ENST00000504719 KRTAP7-1Q8IUC3 87 aa15.58■□□□□ 0.08
PVT1-201ENST00000504719 C1orf137Q5JT78 98 aa15.56■□□□□ 0.08
PVT1-201ENST00000504719 MAP1LC3CQ9BXW4 147 aa15.56■□□□□ 0.08
PVT1-201ENST00000504719 M0QXV9 152 aa15.54■□□□□ 0.08
PVT1-201ENST00000504719 PLNP26678 52 aa15.54■□□□□ 0.08
PVT1-201ENST00000504719 PMCHL2Q9BQD1 86 aa15.54■□□□□ 0.08
PVT1-201ENST00000504719 PFN2P35080 140 aa15.53■□□□□ 0.08
PVT1-201ENST00000504719 KRTAP11-1Q8IUC1 163 aa15.53■□□□□ 0.08
PVT1-201ENST00000504719 ZNF625Q96I27 306 aaPredicted RBP15.53■□□□□ 0.08
PVT1-201ENST00000504719 DPM2O94777 84 aa15.52■□□□□ 0.08
PVT1-201ENST00000504719 SFTA2Q6UW10 78 aa15.52■□□□□ 0.08
PVT1-201ENST00000504719 KRTAP10-8P60410 259 aa15.51■□□□□ 0.07
PVT1-201ENST00000504719 COA6Q5JTJ3 125 aaKnown RBP15.51■□□□□ 0.07
PVT1-201ENST00000504719 ERG28Q9UKR5 140 aa15.51■□□□□ 0.07
PVT1-201ENST00000504719 IGKCP01834 107 aa15.49■□□□□ 0.07
PVT1-201ENST00000504719 IGLV7-43P04211 117 aa15.48■□□□□ 0.07
PVT1-201ENST00000504719 SYS1-DBNDD2H3BUS1 97 aa15.47■□□□□ 0.07
PVT1-201ENST00000504719 COX17Q14061 63 aa15.47■□□□□ 0.07
PVT1-201ENST00000504719 C22orf24Q9Y442 160 aa15.47■□□□□ 0.07
PVT1-201ENST00000504719 UBE2BP63146 152 aa15.46■□□□□ 0.07
PVT1-201ENST00000504719 LEPROTO15243 131 aa15.43■□□□□ 0.06
PVT1-201ENST00000504719 HERVK_113P61574 105 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms