RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 VPS25Q9BRG1 176 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 A0A1B0GW15 77 aa10.2□□□□□ -0.78
SCLT1-204ENST00000503215 MAP1LC3CQ9BXW4 147 aa10.2□□□□□ -0.78
SCLT1-204ENST00000503215 UBE2D4Q9Y2X8 147 aa10.2□□□□□ -0.78
SCLT1-204ENST00000503215 LEPROTL1O95214 131 aa10.19□□□□□ -0.78
SCLT1-204ENST00000503215 Q6ZRU5 148 aa10.18□□□□□ -0.78
SCLT1-204ENST00000503215 Q6ZUT4 128 aa10.18□□□□□ -0.78
SCLT1-204ENST00000503215 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
SCLT1-204ENST00000503215 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
SCLT1-204ENST00000503215 PPP1R17O96001 155 aa10.17□□□□□ -0.78
SCLT1-204ENST00000503215 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
SCLT1-204ENST00000503215 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
SCLT1-204ENST00000503215 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 A6NDN8 102 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 COX8AP10176 69 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
SCLT1-204ENST00000503215 SYCNQ0VAF6 134 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 LINC01545Q5VT33 79 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 C7orf33Q8WU49 177 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
SCLT1-204ENST00000503215 H3BRM9 83 aa10.15□□□□□ -0.78
SCLT1-204ENST00000503215 ZNF561-AS1K7EIQ3 104 aa10.15□□□□□ -0.78
SCLT1-204ENST00000503215 TNFRSF6BO95407 300 aa10.15□□□□□ -0.78
SCLT1-204ENST00000503215 CKS2P33552 79 aa10.15□□□□□ -0.78
SCLT1-204ENST00000503215 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
SCLT1-204ENST00000503215 RNF151Q2KHN1 245 aa10.15□□□□□ -0.78
SCLT1-204ENST00000503215 C5orf38Q86SI9 138 aa10.15□□□□□ -0.78
SCLT1-204ENST00000503215 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.78
SCLT1-204ENST00000503215 D6R8Y8 96 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 COX7A2LO14548 114 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 NPYP01303 97 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 SCGB1A1P11684 91 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 PLA2G2DQ9UNK4 145 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 URB1-AS1Q96HZ7 61 aa10.14□□□□□ -0.79
SCLT1-204ENST00000503215 MALP21145 153 aa10.13□□□□□ -0.79
SCLT1-204ENST00000503215 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
SCLT1-204ENST00000503215 TIMM21Q9BVV7 248 aa10.13□□□□□ -0.79
SCLT1-204ENST00000503215 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
SCLT1-204ENST00000503215 GAGE10A6NGK3 116 aa10.12□□□□□ -0.79
SCLT1-204ENST00000503215 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
SCLT1-204ENST00000503215 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
SCLT1-204ENST00000503215 ODF1Q14990 250 aa10.12□□□□□ -0.79
SCLT1-204ENST00000503215 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
SCLT1-204ENST00000503215 LINC00474Q9P2X8 69 aa10.11□□□□□ -0.79
SCLT1-204ENST00000503215 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
SCLT1-204ENST00000503215 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
SCLT1-204ENST00000503215 CAMK2N2Q96S95 79 aa10.1□□□□□ -0.79
SCLT1-204ENST00000503215 TNXBP22105 4242 aa10.09□□□□□ -0.79
SCLT1-204ENST00000503215 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
SCLT1-204ENST00000503215 HSD52Q0P140 79 aa10.09□□□□□ -0.79
SCLT1-204ENST00000503215 SMAGPQ0VAQ4 97 aa10.09□□□□□ -0.79
SCLT1-204ENST00000503215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.08□□□□□ -0.8
SCLT1-204ENST00000503215 K7EP34 96 aa10.08□□□□□ -0.8
SCLT1-204ENST00000503215 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
SCLT1-204ENST00000503215 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
SCLT1-204ENST00000503215 APOMO95445 188 aa10.07□□□□□ -0.8
SCLT1-204ENST00000503215 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
SCLT1-204ENST00000503215 Q6ZVH6 145 aa10.07□□□□□ -0.8
SCLT1-204ENST00000503215 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
SCLT1-204ENST00000503215 SRSF9Q13242 221 aaKnown RBP eCLIP10.06□□□□□ -0.8
SCLT1-204ENST00000503215 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
SCLT1-204ENST00000503215 C2orf48Q96LS8 159 aa10.06□□□□□ -0.8
SCLT1-204ENST00000503215 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
SCLT1-204ENST00000503215 SPANXA1Q9NS26 97 aa10.06□□□□□ -0.8
SCLT1-204ENST00000503215 PKIGQ9Y2B9 76 aa10.06□□□□□ -0.8
SCLT1-204ENST00000503215 MRPS36P82909 103 aaKnown RBP10.05□□□□□ -0.8
SCLT1-204ENST00000503215 C10orf25Q5T742 122 aa10.05□□□□□ -0.8
SCLT1-204ENST00000503215 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
SCLT1-204ENST00000503215 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
SCLT1-204ENST00000503215 HIGD1BQ9P298 99 aa10.05□□□□□ -0.8
SCLT1-204ENST00000503215 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
SCLT1-204ENST00000503215 FA2HQ7L5A8 372 aa10.04□□□□□ -0.8
SCLT1-204ENST00000503215 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
SCLT1-204ENST00000503215 RPL18AQ02543 176 aaKnown RBP10.03□□□□□ -0.8
SCLT1-204ENST00000503215 Q6ZRP5 223 aa10.03□□□□□ -0.8
SCLT1-204ENST00000503215 J3QR89 54 aa10.02□□□□□ -0.8
SCLT1-204ENST00000503215 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.8
SCLT1-204ENST00000503215 SPINK6Q6UWN8 80 aa10.02□□□□□ -0.8
SCLT1-204ENST00000503215 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.8
SCLT1-204ENST00000503215 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
SCLT1-204ENST00000503215 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
SCLT1-204ENST00000503215 KRTAP10-8P60410 259 aa10.01□□□□□ -0.81
SCLT1-204ENST00000503215 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
SCLT1-204ENST00000503215 A0A1W2PPM0 123 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 FAM168BA1KXE4 195 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 LINC01546A6NGU7 62 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 PRSS47A8MTI9 375 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 FABP2P12104 132 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 KIAA0087Q14695 138 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 LINC00173Q6ZV60 143 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 MRPL35Q9NZE8 188 aaKnown RBP10□□□□□ -0.81
SCLT1-204ENST00000503215 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 PSORS1C2Q9UIG4 136 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
SCLT1-204ENST00000503215 IFI27P40305 119 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-204ENST00000503215 KRTAP11-1Q8IUC1 163 aa9.99□□□□□ -0.81
SCLT1-204ENST00000503215 SVIPQ8NHG7 77 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms