RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CKS1BP61024 79 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 HERVK_113P63121 156 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 C2orf82Q6UX34 121 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 Q8N8P6 123 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 PRELID3AQ96N28 172 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 VCX2Q9H322 139 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 IGLV5-37A0A075B6J1 123 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 BCE1O60756 84 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 PRSS2P07478 247 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 CRYGAP11844 174 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 PNRC1Q12796 327 aaPredicted RBP3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 PRR4Q16378 134 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 FAM229BQ4G0N7 80 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 MRPL54Q6P161 138 aaKnown RBP3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 ANAPC16Q96DE5 110 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 MAP1LC3AQ9H492 121 aa3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 NXT2Q9NPJ8 142 aaKnown RBP3.6□□□□□ -1.83
LSM3P4-201ENST00000502948 IGLV5-45A0A087WSX0 123 aa3.59□□□□□ -1.83
LSM3P4-201ENST00000502948 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.83
LSM3P4-201ENST00000502948 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
LSM3P4-201ENST00000502948 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
LSM3P4-201ENST00000502948 ALKBH7Q9BT30 221 aaPredicted RBP3.59□□□□□ -1.83
LSM3P4-201ENST00000502948 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.83
LSM3P4-201ENST00000502948 A0A087X002 238 aa3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 SRSF3P84103 164 aaKnown RBP3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 PDZD11Q5EBL8 140 aa3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 TOMM6Q96B49 74 aa3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
LSM3P4-201ENST00000502948 TINCRA0A1B0GVN0 87 aa3.57□□□□□ -1.84
LSM3P4-201ENST00000502948 LINC01546A6NGU7 62 aa3.57□□□□□ -1.84
LSM3P4-201ENST00000502948 ERASQ7Z444 233 aa3.57□□□□□ -1.84
LSM3P4-201ENST00000502948 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
LSM3P4-201ENST00000502948 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
LSM3P4-201ENST00000502948 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 TRAV9-1A0A075B6T8 112 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 LOC389332A0A1B0GUA5 103 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 MT-ND4LP03901 98 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 LINC00167Q96N53 147 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 MRPL18Q9H0U6 180 aaKnown RBP3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 TOMM7Q9P0U1 55 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 FAT4Q6V0I7 4981 aa3.56□□□□□ -1.84
LSM3P4-201ENST00000502948 EIF4EBP3O60516 100 aaPredicted RBP3.55□□□□□ -1.84
LSM3P4-201ENST00000502948 COX17Q14061 63 aa3.55□□□□□ -1.84
LSM3P4-201ENST00000502948 SFTA2Q6UW10 78 aa3.55□□□□□ -1.84
LSM3P4-201ENST00000502948 LINC00469Q8N7U9 141 aa3.55□□□□□ -1.84
LSM3P4-201ENST00000502948 COX7B2Q8TF08 81 aa3.55□□□□□ -1.84
LSM3P4-201ENST00000502948 TSPAN13O95857 204 aa3.54□□□□□ -1.84
LSM3P4-201ENST00000502948 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
LSM3P4-201ENST00000502948 ZC2HC1BQ5TFG8 222 aa3.54□□□□□ -1.84
LSM3P4-201ENST00000502948 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
LSM3P4-201ENST00000502948 LINC00304Q8N9R0 145 aa3.54□□□□□ -1.84
LSM3P4-201ENST00000502948 GNB1LQ9BYB4 327 aa3.54□□□□□ -1.84
LSM3P4-201ENST00000502948 IGLV5-39A0A0G2JS06 123 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 H3BRM9 83 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 UBE2AP49459 152 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 PMVKQ15126 192 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 COX19Q49B96 90 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 NKAPP1Q8N9T2 125 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 SCGB3A1Q96QR1 104 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 CST9LQ9H4G1 147 aa3.53□□□□□ -1.84
LSM3P4-201ENST00000502948 hCG_2014768A0A024R1R8 64 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 IGLV7-46A0A075B6I9 117 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 IGKV2D-26A0A0A0MRZ7 120 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 RPL37AP8A6NKH3 93 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 ATP5LO75964 103 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 RPL24P83731 157 aaKnown RBP3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 TMEM126AQ9H061 195 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 CDIP1Q9H305 208 aa3.52□□□□□ -1.85
LSM3P4-201ENST00000502948 IGLC3P0DOY3 106 aa3.51□□□□□ -1.85
LSM3P4-201ENST00000502948 VPREB1P12018 145 aa3.51□□□□□ -1.85
LSM3P4-201ENST00000502948 PLEKHB2Q96CS7 222 aa3.51□□□□□ -1.85
LSM3P4-201ENST00000502948 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 M0R378 163 aa3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 ADCYAP1P18509 176 aa3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 UQCC3Q6UW78 93 aa3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 SND1-IT1Q9HBX3 110 aa3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
LSM3P4-201ENST00000502948 IGKV2-28A0A075B6P5 120 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 GAGE10A6NGK3 116 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 IGKV2D-28P01615 120 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 SPINK8P0C7L1 97 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 RAB5BP61020 215 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 RAB14P61106 215 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 PRLHP81277 87 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 ASB16-AS1Q495Z4 193 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 FAM19A1Q7Z5A9 133 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 ZNF706Q9Y5V0 76 aaPredicted RBP3.49□□□□□ -1.85
LSM3P4-201ENST00000502948 SPINK1P00995 79 aa3.48□□□□□ -1.85
LSM3P4-201ENST00000502948 ZNF22P17026 224 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms