RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
NUP54-202ENST00000502850 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
NUP54-202ENST00000502850 SPART-AS1P0CW21 52 aa8.32□□□□□ -1.08
NUP54-202ENST00000502850 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
NUP54-202ENST00000502850 CXCL5P42830 114 aa8.32□□□□□ -1.08
NUP54-202ENST00000502850 Q8IZM0 81 aa8.32□□□□□ -1.08
NUP54-202ENST00000502850 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
NUP54-202ENST00000502850 LINC00158P58513 81 aa8.31□□□□□ -1.08
NUP54-202ENST00000502850 Q8NAQ8 132 aa8.31□□□□□ -1.08
NUP54-202ENST00000502850 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
NUP54-202ENST00000502850 TRACP01848 142 aa8.3□□□□□ -1.08
NUP54-202ENST00000502850 MRPL23Q16540 153 aaKnown RBP8.3□□□□□ -1.08
NUP54-202ENST00000502850 C6orf226Q5I0X4 101 aa8.3□□□□□ -1.08
NUP54-202ENST00000502850 C5orf38Q86SI9 138 aa8.3□□□□□ -1.08
NUP54-202ENST00000502850 CLEC2BQ92478 149 aa8.3□□□□□ -1.08
NUP54-202ENST00000502850 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
NUP54-202ENST00000502850 CD164L2Q6UWJ8 174 aa8.29□□□□□ -1.08
NUP54-202ENST00000502850 MGAM2Q2M2H8 2515 aa8.29□□□□□ -1.08
NUP54-202ENST00000502850 RPL28P46779 137 aaKnown RBP8.29□□□□□ -1.08
NUP54-202ENST00000502850 XCL1P47992 114 aa8.29□□□□□ -1.08
NUP54-202ENST00000502850 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
NUP54-202ENST00000502850 IGHV4-30-4P0DP06 118 aa8.28□□□□□ -1.08
NUP54-202ENST00000502850 CKS1BP61024 79 aa8.27□□□□□ -1.09
NUP54-202ENST00000502850 COX17Q14061 63 aa8.27□□□□□ -1.09
NUP54-202ENST00000502850 LELP1Q5T871 98 aa8.27□□□□□ -1.09
NUP54-202ENST00000502850 CFAP161Q6P656 301 aa8.27□□□□□ -1.09
NUP54-202ENST00000502850 PKD1L1Q8TDX9 2849 aa8.27□□□□□ -1.09
NUP54-202ENST00000502850 A0A096LPF7 62 aa8.26□□□□□ -1.09
NUP54-202ENST00000502850 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
NUP54-202ENST00000502850 MUC7Q8TAX7 377 aa8.26□□□□□ -1.09
NUP54-202ENST00000502850 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 H0YGX0 51 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 DEFB4AO15263 64 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 ANGP03950 147 aaKnown RBP8.25□□□□□ -1.09
NUP54-202ENST00000502850 CCL18P55774 89 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 REG3AQ06141 175 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 LINC00269Q8N2A0 174 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 MALP21145 153 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 DEFB121Q5J5C9 76 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 CHCHD10Q8WYQ3 142 aaPredicted RBP8.25□□□□□ -1.09
NUP54-202ENST00000502850 CELA1Q9UNI1 258 aa8.25□□□□□ -1.09
NUP54-202ENST00000502850 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
NUP54-202ENST00000502850 PFN2P35080 140 aa8.24□□□□□ -1.09
NUP54-202ENST00000502850 CLPSL2Q6UWE3 100 aa8.24□□□□□ -1.09
NUP54-202ENST00000502850 IGKV2-28A0A075B6P5 120 aa8.23□□□□□ -1.09
NUP54-202ENST00000502850 H3BNG1 76 aa8.23□□□□□ -1.09
NUP54-202ENST00000502850 IGKV2D-28P01615 120 aa8.23□□□□□ -1.09
NUP54-202ENST00000502850 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
NUP54-202ENST00000502850 XGP55808 180 aa8.22□□□□□ -1.09
NUP54-202ENST00000502850 NDUFC2O95298 119 aa8.21□□□□□ -1.09
NUP54-202ENST00000502850 DNAL4O96015 105 aa8.21□□□□□ -1.09
NUP54-202ENST00000502850 ACYP1P07311 99 aa8.21□□□□□ -1.09
NUP54-202ENST00000502850 HTN3P15516 51 aa8.21□□□□□ -1.09
NUP54-202ENST00000502850 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.09
NUP54-202ENST00000502850 A0A1B0GV72 72 aa8.2□□□□□ -1.1
NUP54-202ENST00000502850 SNCGO76070 127 aa8.2□□□□□ -1.1
NUP54-202ENST00000502850 INAFM2P0DMQ5 153 aa8.2□□□□□ -1.1
NUP54-202ENST00000502850 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
NUP54-202ENST00000502850 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
NUP54-202ENST00000502850 KLK5Q9Y337 293 aaPredicted RBP8.2□□□□□ -1.1
NUP54-202ENST00000502850 MT-ATP8P03928 68 aa8.19□□□□□ -1.1
NUP54-202ENST00000502850 PRR34Q9NV39 138 aa8.19□□□□□ -1.1
NUP54-202ENST00000502850 MEGF8Q7Z7M0 2845 aa8.19□□□□□ -1.1
NUP54-202ENST00000502850 TRRAPQ9Y4A5 3859 aa8.19□□□□□ -1.1
NUP54-202ENST00000502850 BAALC-AS2P0C853 105 aa8.18□□□□□ -1.1
NUP54-202ENST00000502850 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
NUP54-202ENST00000502850 OR13C6PQ8NH95 151 aa8.18□□□□□ -1.1
NUP54-202ENST00000502850 VWFP04275 2813 aa8.18□□□□□ -1.1
NUP54-202ENST00000502850 A0A1B0GX51 115 aa8.18□□□□□ -1.1
NUP54-202ENST00000502850 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
NUP54-202ENST00000502850 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
NUP54-202ENST00000502850 Q6Q795 121 aa8.16□□□□□ -1.1
NUP54-202ENST00000502850 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
NUP54-202ENST00000502850 FAM218AQ96MZ4 157 aa8.16□□□□□ -1.1
NUP54-202ENST00000502850 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
NUP54-202ENST00000502850 A0A0J9YWU9 116 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 KLK12Q9UKR0 248 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
NUP54-202ENST00000502850 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 OXLD1Q5BKU9 147 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 NOTCH1P46531 2555 aa8.14□□□□□ -1.11
NUP54-202ENST00000502850 KRTAP10-11P60412 298 aa8.13□□□□□ -1.11
NUP54-202ENST00000502850 KPRPQ5T749 579 aaPredicted RBP8.13□□□□□ -1.11
NUP54-202ENST00000502850 Q8N3U1 123 aa8.13□□□□□ -1.11
NUP54-202ENST00000502850 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
NUP54-202ENST00000502850 A0A087WYN8 130 aa8.12□□□□□ -1.11
NUP54-202ENST00000502850 NBEAL2Q6ZNJ1 2754 aa8.12□□□□□ -1.11
NUP54-202ENST00000502850 ENHOQ6UWT2 76 aa8.11□□□□□ -1.11
NUP54-202ENST00000502850 Q9HAA7 133 aa8.11□□□□□ -1.11
NUP54-202ENST00000502850 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
NUP54-202ENST00000502850 LECT2O14960 151 aa8.11□□□□□ -1.11
NUP54-202ENST00000502850 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
NUP54-202ENST00000502850 TGP01266 2768 aa8.09□□□□□ -1.11
NUP54-202ENST00000502850 F8WDY8 70 aa8.09□□□□□ -1.11
NUP54-202ENST00000502850 Q6ZTC4 211 aa8.09□□□□□ -1.11
NUP54-202ENST00000502850 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
NUP54-202ENST00000502850 RETNQ9HD89 108 aa8.09□□□□□ -1.11
NUP54-202ENST00000502850 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms