RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	CCL25	O15444	150 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	PSCA	O43653	123 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	LEPROTL1	O95214	131 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	ZC2HC1B	Q5TFG8	222 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	KRTAP26-1	Q6PEX3	210 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	BAALC	Q8WXS3	180 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	AMELX	Q99217	191 aa		4.87	□□□□□ -1.63
GARNL3-222	ENST00000498801	S100A6	P06703	90 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	FABP4	P15090	132 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	XCL1	P47992	114 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	UBE2D1	P51668	147 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	PMVK	Q15126	192 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	IFI27L1	Q96BM0	104 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	CST9L	Q9H4G1	147 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	HSPB8	Q9UJY1	196 aa		4.86	□□□□□ -1.63
GARNL3-222	ENST00000498801	LINC00242	Q5T6M2	205 aa		4.85	□□□□□ -1.63
GARNL3-222	ENST00000498801	CD164L2	Q6UWJ8	174 aa		4.85	□□□□□ -1.63
GARNL3-222	ENST00000498801	PACRG	Q96M98	296 aa	Predicted RBP	4.85	□□□□□ -1.63
GARNL3-222	ENST00000498801	FAT2	Q9NYQ8	4349 aa		4.85	□□□□□ -1.63
GARNL3-222	ENST00000498801	DNAH2	Q9P225	4427 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801	TRAV12-1	A0A0B4J245	112 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801	LRCOL1	A6NCL2	159 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801	SEC11A	P67812	179 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801		Q6ZVQ6	151 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801	FAM19A3	Q7Z5A8	133 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801	HIST3H2BB	Q8N257	126 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801	KRTAP9-8	Q9BYQ0	159 aa		4.84	□□□□□ -1.63
GARNL3-222	ENST00000498801		A0A087WTM6	91 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801		A0A0J9YXV3	536 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801		H0Y8G0	127 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	COX7A2L	O14548	114 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	LECT2	O14960	151 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	S100A2	P29034	98 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	COX6A2	Q02221	97 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	WFDC2	Q14508	124 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	MAP1LC3C	Q9BXW4	147 aa		4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	GEMIN7	Q9H840	131 aa	Known RBP	4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	EPPK1	P58107	5090 aa	Known RBP	4.83	□□□□□ -1.64
GARNL3-222	ENST00000498801	IGLV4-69	A0A075B6H9	119 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	TINCR	A0A1B0GVN0	87 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	SYS1-DBNDD2	H3BUS1	97 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	IGLC3	P0DOY3	106 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	HERVK_113	P63121	156 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	C5orf38	Q86SI9	138 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	HIST1H2BL	Q99880	126 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	CHAC1	Q9BUX1	264 aa		4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.82	□□□□□ -1.64
GARNL3-222	ENST00000498801	PKHD1	P08F94	4074 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	IGHV1-58	A0A0C4DH39	117 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	C11orf86	A6NJI1	115 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801		F8VRH5	84 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	LINC00469	Q8N7U9	141 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801		Q8N814	137 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	C15orf56	Q8N910	161 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	MRPL35	Q9NZE8	188 aa	Known RBP	4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	CDKN2A-AS1	Q9UH64	79 aa		4.81	□□□□□ -1.64
GARNL3-222	ENST00000498801	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	APOM	O95445	188 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	C3orf79	P0CE67	100 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	KRTDAP	P60985	99 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	HIGD2B	Q4VC39	106 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	C14orf177	Q52M58	125 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	SPATA12	Q7Z6I5	190 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	LINC01561	Q8N1V8	128 aa		4.8	□□□□□ -1.64
GARNL3-222	ENST00000498801	IGHV3-64	A0A075B6Q5	118 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801		H3BRM9	83 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	DPM2	O94777	84 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	ZNF22	P17026	224 aa	Predicted RBP	4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	PLN	P26678	52 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	OR10D4P	Q8NGN7	298 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	ORAOV1	Q8WV07	137 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	PMCHL2	Q9BQD1	86 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	PKD1	P98161	4303 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	DNAH10	Q8IVF4	4471 aa		4.79	□□□□□ -1.64
GARNL3-222	ENST00000498801	BIRC6	Q9NR09	4857 aa		4.78	□□□□□ -1.64
GARNL3-222	ENST00000498801	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.78	□□□□□ -1.64
GARNL3-222	ENST00000498801	SPINK8	P0C7L1	97 aa		4.78	□□□□□ -1.64
GARNL3-222	ENST00000498801	SPAG11B	Q08648	103 aa		4.78	□□□□□ -1.64
GARNL3-222	ENST00000498801	TMEM170B	Q5T4T1	132 aa		4.78	□□□□□ -1.64
GARNL3-222	ENST00000498801	LINC01545	Q5VT33	79 aa		4.78	□□□□□ -1.64
GARNL3-222	ENST00000498801	TMEM223	A0PJW6	202 aa		4.77	□□□□□ -1.65
GARNL3-222	ENST00000498801	C20orf202	A1L168	122 aa		4.77	□□□□□ -1.65
GARNL3-222	ENST00000498801	IGKC	P01834	107 aa		4.77	□□□□□ -1.65
GARNL3-222	ENST00000498801	LINC00526	Q96FQ7	95 aa		4.77	□□□□□ -1.65
GARNL3-222	ENST00000498801	DNAH17	Q9UFH2	4485 aa		4.77	□□□□□ -1.65
GARNL3-222	ENST00000498801	IGLV7-46	A0A075B6I9	117 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	C16orf90	A8MZG2	172 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	FUS	P35637	526 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	CNBP	P62633	177 aa	Known RBP	4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	HERV-K104	P63124	156 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	KIAA0087	Q14695	138 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801		Q6ZSA8	131 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801		Q8IZM0	81 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	COX7B2	Q8TF08	81 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	CAMK2N2	Q96S95	79 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	TOMM7	Q9P0U1	55 aa		4.76	□□□□□ -1.65
GARNL3-222	ENST00000498801	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.75	□□□□□ -1.65
GARNL3-222	ENST00000498801		F8WDY8	70 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms