RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.74
CDKN2A-209ENST00000498628 TNXBP22105 4242 aa10.4□□□□□ -0.75
CDKN2A-209ENST00000498628 ADCYAP1P18509 176 aa10.38□□□□□ -0.75
CDKN2A-209ENST00000498628 CXCL5P42830 114 aa10.38□□□□□ -0.75
CDKN2A-209ENST00000498628 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
CDKN2A-209ENST00000498628 F8VRH5 84 aa10.36□□□□□ -0.75
CDKN2A-209ENST00000498628 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
CDKN2A-209ENST00000498628 LBHQ53QV2 105 aaPredicted RBP10.35□□□□□ -0.75
CDKN2A-209ENST00000498628 C9orf129Q5T035 196 aaKnown RBP10.35□□□□□ -0.75
CDKN2A-209ENST00000498628 FA2HQ7L5A8 372 aa10.35□□□□□ -0.75
CDKN2A-209ENST00000498628 LINC00469Q8N7U9 141 aa10.35□□□□□ -0.75
CDKN2A-209ENST00000498628 UBR4Q5T4S7 5183 aa10.35□□□□□ -0.75
CDKN2A-209ENST00000498628 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
CDKN2A-209ENST00000498628 H0Y9J4 135 aa10.34□□□□□ -0.75
CDKN2A-209ENST00000498628 FABP9Q0Z7S8 132 aa10.34□□□□□ -0.75
CDKN2A-209ENST00000498628 IFITM2Q01629 132 aa10.33□□□□□ -0.76
CDKN2A-209ENST00000498628 PDZD11Q5EBL8 140 aa10.33□□□□□ -0.76
CDKN2A-209ENST00000498628 COMMD7Q86VX2 200 aa10.33□□□□□ -0.76
CDKN2A-209ENST00000498628 LINC01546A6NGU7 62 aa10.32□□□□□ -0.76
CDKN2A-209ENST00000498628 ODF1Q14990 250 aa10.32□□□□□ -0.76
CDKN2A-209ENST00000498628 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
CDKN2A-209ENST00000498628 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
CDKN2A-209ENST00000498628 NUPR1O60356 82 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 PMVKQ15126 192 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 RHEBQ15382 184 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 CST9LQ9H4G1 147 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
CDKN2A-209ENST00000498628 H3BRM9 83 aa10.3□□□□□ -0.76
CDKN2A-209ENST00000498628 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
CDKN2A-209ENST00000498628 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
CDKN2A-209ENST00000498628 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
CDKN2A-209ENST00000498628 IGLV5-45A0A087WSX0 123 aa10.28□□□□□ -0.76
CDKN2A-209ENST00000498628 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
CDKN2A-209ENST00000498628 TP73-AS1Q9UF72 201 aa10.28□□□□□ -0.76
CDKN2A-209ENST00000498628 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
CDKN2A-209ENST00000498628 ZNF861PO60384 105 aa10.26□□□□□ -0.77
CDKN2A-209ENST00000498628 RPL13AP40429 203 aaKnown RBP10.26□□□□□ -0.77
CDKN2A-209ENST00000498628 MRPL55Q7Z7F7 128 aaKnown RBP10.26□□□□□ -0.77
CDKN2A-209ENST00000498628 CARHSP1Q9Y2V2 147 aaKnown RBP10.26□□□□□ -0.77
CDKN2A-209ENST00000498628 SPINK8P0C7L1 97 aa10.25□□□□□ -0.77
CDKN2A-209ENST00000498628 NDUFA6P56556 154 aa10.25□□□□□ -0.77
CDKN2A-209ENST00000498628 TRAPPC1Q9Y5R8 145 aa10.25□□□□□ -0.77
CDKN2A-209ENST00000498628 ATP5LO75964 103 aa10.24□□□□□ -0.77
CDKN2A-209ENST00000498628 LINC00614P0C842 121 aa10.24□□□□□ -0.77
CDKN2A-209ENST00000498628 RAB5BP61020 215 aa10.23□□□□□ -0.77
CDKN2A-209ENST00000498628 RPL28P46779 137 aaKnown RBP10.22□□□□□ -0.77
CDKN2A-209ENST00000498628 NDUFA5Q16718 116 aa10.22□□□□□ -0.77
CDKN2A-209ENST00000498628 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
CDKN2A-209ENST00000498628 HBDP02042 147 aa10.21□□□□□ -0.77
CDKN2A-209ENST00000498628 IGLC3P0DOY3 106 aa10.21□□□□□ -0.77
CDKN2A-209ENST00000498628 BCE1O60756 84 aa10.2□□□□□ -0.78
CDKN2A-209ENST00000498628 KRTAP1-4P0C5Y4 121 aa10.2□□□□□ -0.78
CDKN2A-209ENST00000498628 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
CDKN2A-209ENST00000498628 SNAPINO95295 136 aa10.19□□□□□ -0.78
CDKN2A-209ENST00000498628 C18orf32Q8TCD1 76 aa10.19□□□□□ -0.78
CDKN2A-209ENST00000498628 LRP2P98164 4655 aa10.18□□□□□ -0.78
CDKN2A-209ENST00000498628 APOC3P02656 99 aa10.18□□□□□ -0.78
CDKN2A-209ENST00000498628 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
CDKN2A-209ENST00000498628 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
CDKN2A-209ENST00000498628 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
CDKN2A-209ENST00000498628 SVBPQ8N300 66 aa10.17□□□□□ -0.78
CDKN2A-209ENST00000498628 IGLV5-39A0A0G2JS06 123 aa10.16□□□□□ -0.78
CDKN2A-209ENST00000498628 PFN2P35080 140 aa10.16□□□□□ -0.78
CDKN2A-209ENST00000498628 BAGE3Q86Y29 109 aa10.16□□□□□ -0.78
CDKN2A-209ENST00000498628 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
CDKN2A-209ENST00000498628 ZNF22P17026 224 aaPredicted RBP10.15□□□□□ -0.78
CDKN2A-209ENST00000498628 COX17Q14061 63 aa10.15□□□□□ -0.78
CDKN2A-209ENST00000498628 A0A096LNJ9 63 aa10.14□□□□□ -0.79
CDKN2A-209ENST00000498628 UBE2AP49459 152 aa10.14□□□□□ -0.79
CDKN2A-209ENST00000498628 RPL24P83731 157 aaKnown RBP10.14□□□□□ -0.79
CDKN2A-209ENST00000498628 TMEM170BQ5T4T1 132 aa10.14□□□□□ -0.79
CDKN2A-209ENST00000498628 URB1-AS1Q96HZ7 61 aa10.14□□□□□ -0.79
CDKN2A-209ENST00000498628 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
CDKN2A-209ENST00000498628 PMCHL1Q16048 86 aa10.13□□□□□ -0.79
CDKN2A-209ENST00000498628 CRYGAP11844 174 aa10.12□□□□□ -0.79
CDKN2A-209ENST00000498628 CHTOPQ9Y3Y2 248 aaKnown RBP10.11□□□□□ -0.79
CDKN2A-209ENST00000498628 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
CDKN2A-209ENST00000498628 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
CDKN2A-209ENST00000498628 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
CDKN2A-209ENST00000498628 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
CDKN2A-209ENST00000498628 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
CDKN2A-209ENST00000498628 TYMSOSQ8TAI1 123 aa10.09□□□□□ -0.79
CDKN2A-209ENST00000498628 ZNF625Q96I27 306 aaPredicted RBP10.09□□□□□ -0.79
CDKN2A-209ENST00000498628 PRR4Q16378 134 aa10.08□□□□□ -0.8
CDKN2A-209ENST00000498628 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
CDKN2A-209ENST00000498628 ATP6V1G1O75348 118 aa10.06□□□□□ -0.8
CDKN2A-209ENST00000498628 VPREB1P12018 145 aa10.06□□□□□ -0.8
CDKN2A-209ENST00000498628 LINC00158P58513 81 aa10.06□□□□□ -0.8
CDKN2A-209ENST00000498628 IFI27L1Q96BM0 104 aa10.06□□□□□ -0.8
CDKN2A-209ENST00000498628 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
CDKN2A-209ENST00000498628 SCO1O75880 301 aa10.04□□□□□ -0.8
CDKN2A-209ENST00000498628 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
CDKN2A-209ENST00000498628 KRTAP13-1Q8IUC0 172 aa10.04□□□□□ -0.8
CDKN2A-209ENST00000498628 A0A087X002 238 aa10.03□□□□□ -0.8
CDKN2A-209ENST00000498628 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
CDKN2A-209ENST00000498628 HSBP1O75506 76 aa10.03□□□□□ -0.8
CDKN2A-209ENST00000498628 TSPAN13O95857 204 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms