RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 DERL1Q9BUN8 251 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 LINC00312Q9Y6C7 94 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 DMXL2Q8TDJ6 3036 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 HTTP42858 3142 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 IZUMO1RA6ND01 250 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 J3QLW9 94 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 CISD3P0C7P0 127 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 HRES1P13985 223 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 PFN2P35080 140 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 YAP1P46937 504 aaKnown RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 C6orf141Q5SZD1 244 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 DSCAMO60469 2012 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 IGHV3-74A0A0B4J1X5 117 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 IGHV3-64DA0A0J9YX35 117 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 DHFRP00374 187 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 DDTP30046 118 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 PGFP49763 221 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 YPEL3P61236 119 aaPredicted RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 CCSMST1Q4G0I0 132 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 Q8N976 141 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 TRBV27A0A0K0K1C4 114 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 NPYP01303 97 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 IL3P08700 152 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 SRP19P09132 144 aaKnown RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 CD52P31358 61 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 CCL11P51671 97 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 CLDN8P56748 225 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 KRTAP12-1P59990 96 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 ADIRFQ15847 76 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 IGFL1Q6UW32 110 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 HAVCR2Q8TDQ0 301 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 RNASE7Q9H1E1 156 aaKnown RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 CITO14578 2027 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 COL12A1Q99715 3063 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 HMCN2Q8NDA2 5059 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 YLPM1P49750 1951 aaKnown RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 NUP210Q8TEM1 1887 aaPredicted RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 HIST1H2BKO60814 126 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 HIST1H2BJP06899 126 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 EMX2Q04743 252 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 RTL8BQ17RB0 113 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 C18orf21Q32NC0 220 aaPredicted RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 APOBEC3HQ6NTF7 200 aaKnown RBP0.87□□□□□ -2.27
XRN1-214ENST00000498077 SPACA4Q8TDM5 124 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 C19orf43Q9BQ61 176 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 RTL8AQ9BWD3 113 aa0.87□□□□□ -2.27
XRN1-214ENST00000498077 A0A0A6YYD5 115 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 A0A0B4J2E0 115 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 A0A1B0GX12 115 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 PLAC8L1A1L4L8 177 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 F5H768 121 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 TRBV12-3P01733 135 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 SPINK9Q5DT21 86 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 CSAG1Q6PB30 78 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 C5orf46Q6UWT4 87 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 Q8N8P6 123 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 COX7B2Q8TF08 81 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 U3KQA8 63 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 TACC2O95359 2948 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 IGHV6-1A0A0B4J1U7 121 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 IGHV3-48P01763 117 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 APOC2P02655 101 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 SMR3BP02814 79 aaPredicted RBP0.86□□□□□ -2.27
XRN1-214ENST00000498077 WFDC2Q14508 124 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 TMEM255AQ5JRV8 349 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 FREM2Q5SZK8 3169 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 TRAV2A0A0B4J234 112 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 F5H5K5 113 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 LECT2O14960 151 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 WISP2O76076 250 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 H2AFZP0C0S5 128 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 UBE2SQ16763 222 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 Q6ZSR3 168 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 Q8IYB0 196 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 RBM12B-AS1Q9P1G2 102 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 SAR1BQ9Y6B6 198 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.86□□□□□ -2.27
XRN1-214ENST00000498077 LOC285095A0A1B0GVY8 99 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 PYYP10082 97 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 COX6A1P12074 109 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 TSPEAR-AS2P59090 65 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 POLR2LP62875 67 aaKnown RBP0.86□□□□□ -2.27
XRN1-214ENST00000498077 KISS1Q15726 138 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 NTM-AS1Q6ZSK4 140 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 SPICQ8N5J4 248 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 CEP192Q8TEP8 1941 aa0.86□□□□□ -2.27
XRN1-214ENST00000498077 C7orf71A4D174 169 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 H0YJW9 148 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 COX7CP15954 63 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 RPL22L1Q6P5R6 122 aaKnown RBP0.85□□□□□ -2.27
XRN1-214ENST00000498077 EPGNQ6UW88 154 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 FAM223AQ8IWN6 122 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 GPR32P1Q8NGA4 272 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 CDKN2A-AS1Q9UH64 79 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 MYCBP2O75592 4640 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 LCTP09848 1927 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 A0A0J9YYE9 177 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 HIGD1CA8MV81 97 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 TRBC1P01850 177 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 GYPAP02724 150 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms