RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 J3QL48 77 aa9.77□□□□□ -0.85
NUP50-219ENST00000497960 CHTF8P0CG12 524 aa9.77□□□□□ -0.85
NUP50-219ENST00000497960 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.85
NUP50-219ENST00000497960 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
NUP50-219ENST00000497960 LINC00526Q96FQ7 95 aa9.77□□□□□ -0.85
NUP50-219ENST00000497960 PKIGQ9Y2B9 76 aa9.77□□□□□ -0.85
NUP50-219ENST00000497960 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
NUP50-219ENST00000497960 A0A087WYN8 130 aa9.76□□□□□ -0.85
NUP50-219ENST00000497960 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
NUP50-219ENST00000497960 F8VRH5 84 aa9.76□□□□□ -0.85
NUP50-219ENST00000497960 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
NUP50-219ENST00000497960 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
NUP50-219ENST00000497960 MRPL35Q9NZE8 188 aaKnown RBP9.76□□□□□ -0.85
NUP50-219ENST00000497960 PRSS2P07478 247 aa9.75□□□□□ -0.85
NUP50-219ENST00000497960 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
NUP50-219ENST00000497960 ODF1Q14990 250 aa9.75□□□□□ -0.85
NUP50-219ENST00000497960 TMEM170BQ5T4T1 132 aa9.75□□□□□ -0.85
NUP50-219ENST00000497960 CARD19Q96LW7 228 aa9.75□□□□□ -0.85
NUP50-219ENST00000497960 TOMM7Q9P0U1 55 aa9.75□□□□□ -0.85
NUP50-219ENST00000497960 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 S100A2P29034 98 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 SYCNQ0VAF6 134 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
NUP50-219ENST00000497960 HIST3H2BBQ8N257 126 aa9.73□□□□□ -0.85
NUP50-219ENST00000497960 C2orf48Q96LS8 159 aa9.73□□□□□ -0.85
NUP50-219ENST00000497960 PLAC8Q9NZF1 115 aa9.73□□□□□ -0.85
NUP50-219ENST00000497960 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
NUP50-219ENST00000497960 SYS1-DBNDD2H3BUS1 97 aa9.72□□□□□ -0.85
NUP50-219ENST00000497960 KRTDAPP60985 99 aa9.72□□□□□ -0.85
NUP50-219ENST00000497960 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
NUP50-219ENST00000497960 LINC00474Q9P2X8 69 aa9.72□□□□□ -0.85
NUP50-219ENST00000497960 NDUFA1O15239 70 aa9.71□□□□□ -0.86
NUP50-219ENST00000497960 PLNP26678 52 aa9.71□□□□□ -0.86
NUP50-219ENST00000497960 Q8IZM0 81 aa9.71□□□□□ -0.86
NUP50-219ENST00000497960 A0A096LNI7 61 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 DPM2O94777 84 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 C3orf79P0CE67 100 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 Q6ZRU5 148 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 STPG4Q8N801 248 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 COX7B2Q8TF08 81 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
NUP50-219ENST00000497960 F8WDY8 70 aa9.69□□□□□ -0.86
NUP50-219ENST00000497960 IGKCP01834 107 aa9.69□□□□□ -0.86
NUP50-219ENST00000497960 CKS1BP61024 79 aa9.69□□□□□ -0.86
NUP50-219ENST00000497960 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
NUP50-219ENST00000497960 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
NUP50-219ENST00000497960 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
NUP50-219ENST00000497960 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
NUP50-219ENST00000497960 CXCL5P42830 114 aa9.68□□□□□ -0.86
NUP50-219ENST00000497960 HIST1H2BLQ99880 126 aa9.68□□□□□ -0.86
NUP50-219ENST00000497960 KRTAP3-3Q9BYR6 98 aa9.68□□□□□ -0.86
NUP50-219ENST00000497960 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
NUP50-219ENST00000497960 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
NUP50-219ENST00000497960 HERC1Q15751 4861 aa9.67□□□□□ -0.86
NUP50-219ENST00000497960 TMEM223A0PJW6 202 aa9.67□□□□□ -0.86
NUP50-219ENST00000497960 C20orf202A1L168 122 aa9.67□□□□□ -0.86
NUP50-219ENST00000497960 OXTP01178 125 aa9.67□□□□□ -0.86
NUP50-219ENST00000497960 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
NUP50-219ENST00000497960 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
NUP50-219ENST00000497960 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
NUP50-219ENST00000497960 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
NUP50-219ENST00000497960 HERVK_113P61574 105 aa9.66□□□□□ -0.86
NUP50-219ENST00000497960 LINC01545Q5VT33 79 aa9.66□□□□□ -0.86
NUP50-219ENST00000497960 UNQ6190/PRO20217Q6UXQ8 127 aa9.66□□□□□ -0.86
NUP50-219ENST00000497960 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
NUP50-219ENST00000497960 GAGE2BQ13066 116 aa9.65□□□□□ -0.86
NUP50-219ENST00000497960 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
NUP50-219ENST00000497960 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
NUP50-219ENST00000497960 PTTG1IPP53801 180 aa9.64□□□□□ -0.87
NUP50-219ENST00000497960 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
NUP50-219ENST00000497960 C6orf48Q9UBA6 75 aa9.64□□□□□ -0.87
NUP50-219ENST00000497960 RNF151Q2KHN1 245 aa9.63□□□□□ -0.87
NUP50-219ENST00000497960 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
NUP50-219ENST00000497960 LEPROTO15243 131 aa9.59□□□□□ -0.87
NUP50-219ENST00000497960 AKR1D1P51857 326 aa9.59□□□□□ -0.87
NUP50-219ENST00000497960 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
NUP50-219ENST00000497960 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
NUP50-219ENST00000497960 PLEKHB2Q96CS7 222 aa9.59□□□□□ -0.87
NUP50-219ENST00000497960 ATOH7Q8N100 152 aa9.58□□□□□ -0.88
NUP50-219ENST00000497960 NDUFC2-KCTD14E9PQ53 114 aa9.57□□□□□ -0.88
NUP50-219ENST00000497960 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
NUP50-219ENST00000497960 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
NUP50-219ENST00000497960 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
NUP50-219ENST00000497960 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
NUP50-219ENST00000497960 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 E9PLD3 99 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 J3QQQ9 107 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 GAGE2EQ4V326 116 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 Q6ZRP5 223 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 ZNF625Q96I27 306 aaPredicted RBP9.56□□□□□ -0.88
NUP50-219ENST00000497960 GAGE2DQ9UEU5 116 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
NUP50-219ENST00000497960 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
NUP50-219ENST00000497960 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
NUP50-219ENST00000497960 SCGB1D1O95968 90 aa9.54□□□□□ -0.88
NUP50-219ENST00000497960 HERV-K104P63124 156 aa9.54□□□□□ -0.88
NUP50-219ENST00000497960 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms