RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FAM223AQ8IWN6 122 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 A0A0G2JMZ2 1700 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 TGP01266 2768 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 FAT1Q14517 4588 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 LINC00587B1AMM8 73 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 COX6B1P14854 86 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 GNG11P61952 73 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 PPP3R1P63098 170 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 Q0VG73 95 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 C10orf113Q5VZT2 155 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 TMEM203Q969S6 136 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 C1orf167Q5SNV9 1468 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 HYDINQ4G0P3 5121 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 ZFYVE16Q7Z3T8 1539 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 MXRA5Q9NR99 2828 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 PEG3Q9GZU2 1588 aa-0.23□□□□□ -2.45
PSPC1-205ENST00000497722 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 STARD9Q9P2P6 4700 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 HIVEP1P15822 2718 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 UBR4Q5T4S7 5183 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 TRBV7-4A0A0J9YYF1 115 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 COX6CP09669 75 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 SVBPQ8N300 66 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 FAIMQ9NVQ4 179 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 ARL2-SNX15V9GYD0 113 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 URB1O60287 2271 aaKnown RBP-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 DNAH6Q9C0G6 4158 aa-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 CNOT1A5YKK6 2376 aaKnown RBP-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 POLA1P09884 1462 aaPredicted RBP-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 EPPK1P58107 5090 aaKnown RBP-0.24□□□□□ -2.45
PSPC1-205ENST00000497722 EPG5Q9HCE0 2579 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 FXYD6-FXYD2A0A087WZ82 144 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 LINC00959A0A1B0GUT2 108 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 NAP1L6A6NFF2 107 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 SPRR1BP22528 89 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 PRO1854Q9UHT4 67 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 IQSEC2Q5JU85 1478 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 GOLGA4Q13439 2230 aaKnown RBP-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 HTTP42858 3142 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 AKAP9Q99996 3911 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 KIAA1109Q2LD37 5005 aa-0.25□□□□□ -2.45
PSPC1-205ENST00000497722 RNF213Q63HN8 5207 aa-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 LAMA2P24043 3122 aaKnown RBP-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 DNAJC13O75165 2243 aa-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 PDCD11Q14690 1871 aaKnown RBP-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 PAPPA2Q9BXP8 1791 aa-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 K7EQZ3 153 aa-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 MANBALQ9NQG1 85 aa-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 GNG8Q9UK08 70 aa-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 SONP18583 2426 aaKnown RBP-0.26□□□□□ -2.45
PSPC1-205ENST00000497722 SETBP1Q9Y6X0 1596 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 FAM223BA6NKX1 122 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 SAA2P0DJI9 122 aaPredicted RBP-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 SPRR2AP35326 72 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 MRPS10P82664 201 aaKnown RBP-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 DEFA5Q01523 94 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 LINC01600Q96MT4 127 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 LINC00846Q9NV44 126 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 DNAH3Q8TD57 4116 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 KIAA1551Q9HCM1 1747 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 SHPRHQ149N8 1683 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 PCNX1Q96RV3 2341 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 RYR2Q92736 4967 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 SVEP1Q4LDE5 3571 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 PKHD1L1Q86WI1 4243 aa-0.27□□□□□ -2.45
PSPC1-205ENST00000497722 HECTD1Q9ULT8 2610 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 ABCC5O15440 1437 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 FAT3Q8TDW7 4589 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 BIRC6Q9NR09 4857 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 TMEM262E9PQX1 116 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 S100A1P23297 94 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 UBA52P62987 128 aaKnown RBP-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 FXYD6Q9H0Q3 95 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 PRO1933Q9H354 126 aa-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 USP9YO00507 2555 aaPredicted RBP-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 TARBP1Q13395 1621 aaKnown RBP-0.28□□□□□ -2.45
PSPC1-205ENST00000497722 PLEKHH2Q8IVE3 1493 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 PKD1P98161 4303 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 ITPR3Q14573 2671 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 SPTBN4Q9H254 2564 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 DSPP15924 2871 aaKnown RBP-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 MARF1Q9Y4F3 1742 aaKnown RBP-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 A0A1B0GWA3 101 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 SPINK4O60575 86 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 TRAPPC2P0DI81 140 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 TRAPPC2BP0DI82 140 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 SPRR2EP22531 72 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 HSD52Q0P140 79 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 KRTAP6-2Q3LI66 62 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 LCN9Q8WX39 176 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 C12orf57Q99622 126 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 TEP1Q99973 2627 aaKnown RBP-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 PRDM15P57071 1507 aaPredicted RBP-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 CCDC141Q6ZP82 1450 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 NLRP1Q9C000 1473 aa-0.29□□□□□ -2.46
PSPC1-205ENST00000497722 FMN2Q9NZ56 1722 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 FASNP49327 2511 aaKnown RBP-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 CRYM-AS1A6NIL9 109 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms