RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-210	ENST00000497638	CCL20	P78556	96 aa		4.26	□□□□□ -1.73
VPS45-210	ENST00000497638	NOTCH2NL	Q7Z3S9	236 aa		4.26	□□□□□ -1.73
VPS45-210	ENST00000497638	TIMM21	Q9BVV7	248 aa		4.26	□□□□□ -1.73
VPS45-210	ENST00000497638	FXYD6-FXYD2	A0A087WZ82	144 aa		4.25	□□□□□ -1.73
VPS45-210	ENST00000497638		A0A1B0GVG6	124 aa		4.25	□□□□□ -1.73
VPS45-210	ENST00000497638	KIAA0087	Q14695	138 aa		4.25	□□□□□ -1.73
VPS45-210	ENST00000497638	SPAG11A	Q6PDA7	123 aa		4.25	□□□□□ -1.73
VPS45-210	ENST00000497638	FAM213B	Q8TBF2	198 aa		4.25	□□□□□ -1.73
VPS45-210	ENST00000497638	MANBAL	Q9NQG1	85 aa		4.25	□□□□□ -1.73
VPS45-210	ENST00000497638	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	UMAD1	C9J7I0	102 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	VCY	O14598	125 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	KRTAP19-2	Q3LHN2	52 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638		Q5BKY6	102 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	MRPL55	Q7Z7F7	128 aa	Known RBP	4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	KRTAP13-1	Q8IUC0	172 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	KIR2DL4	Q99706	377 aa		4.24	□□□□□ -1.73
VPS45-210	ENST00000497638	TRBV20OR9-2	A0A075B6H5	130 aa		4.23	□□□□□ -1.73
VPS45-210	ENST00000497638	ZNF727	A8MUV8	499 aa		4.23	□□□□□ -1.73
VPS45-210	ENST00000497638	GIP	P09681	153 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS45-210	ENST00000497638	UBE2A	P49459	152 aa		4.23	□□□□□ -1.73
VPS45-210	ENST00000497638	IFITM3	Q01628	133 aa		4.23	□□□□□ -1.73
VPS45-210	ENST00000497638	C2orf82	Q6UX34	121 aa		4.23	□□□□□ -1.73
VPS45-210	ENST00000497638	PPP1R17	O96001	155 aa		4.22	□□□□□ -1.73
VPS45-210	ENST00000497638	DSCR10	P59022	87 aa		4.22	□□□□□ -1.73
VPS45-210	ENST00000497638	HBB	P68871	147 aa		4.22	□□□□□ -1.73
VPS45-210	ENST00000497638	XAGE1A	Q9HD64	81 aa		4.22	□□□□□ -1.73
VPS45-210	ENST00000497638	SPANXA1	Q9NS26	97 aa		4.22	□□□□□ -1.73
VPS45-210	ENST00000497638	KRTAP16-1	A8MUX0	517 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	PDE6D	O43924	150 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	MRPS36	P82909	103 aa	Known RBP	4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	RPL24	P83731	157 aa	Known RBP	4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	LINC00469	Q8N7U9	141 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	BORCS7	Q96B45	105 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	TMEM191A	Q9H0A3	160 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	NDUFA13	Q9P0J0	144 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	GNG13	Q9P2W3	67 aa		4.21	□□□□□ -1.74
VPS45-210	ENST00000497638	RPL37AP8	A6NKH3	93 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	PPP1R2P9	O14990	202 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	TCAP	O15273	167 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	LINC01561	Q8N1V8	128 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	C3orf22	Q8N5N4	141 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	DAND5	Q8N907	189 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	FAM104A	Q969W3	186 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	LINC00167	Q96N53	147 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	MED9	Q9NWA0	146 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	NDUFA12	Q9UI09	145 aa		4.2	□□□□□ -1.74
VPS45-210	ENST00000497638	NDUFAF8	A1L188	74 aa		4.19	□□□□□ -1.74
VPS45-210	ENST00000497638		A8MWL6	223 aa		4.19	□□□□□ -1.74
VPS45-210	ENST00000497638	ARPC5	O15511	151 aa		4.19	□□□□□ -1.74
VPS45-210	ENST00000497638	RAB4A	P20338	218 aa		4.19	□□□□□ -1.74
VPS45-210	ENST00000497638	CKS1B	P61024	79 aa		4.19	□□□□□ -1.74
VPS45-210	ENST00000497638	RPL39	P62891	51 aa	Known RBP	4.19	□□□□□ -1.74
VPS45-210	ENST00000497638		A0A1B0GUT8	65 aa		4.18	□□□□□ -1.74
VPS45-210	ENST00000497638	GAGE10	A6NGK3	116 aa		4.18	□□□□□ -1.74
VPS45-210	ENST00000497638		K7EN84	100 aa		4.18	□□□□□ -1.74
VPS45-210	ENST00000497638	PNRC1	Q12796	327 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS45-210	ENST00000497638	AMN1	Q8IY45	258 aa		4.18	□□□□□ -1.74
VPS45-210	ENST00000497638	SMKR1	H3BMG3	65 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	TEX46	H3BTG2	121 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638		M0R2T5	61 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	GATC	O43716	136 aa	Known RBP	4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	RPL32	P62910	135 aa	Known RBP	4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	PRLH	P81277	87 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638		Q8IZM0	81 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	FAM19A2	Q8N3H0	131 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	OBSCN	Q5VST9	7968 aa		4.17	□□□□□ -1.74
VPS45-210	ENST00000497638	SPINK1	P00995	79 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	C6orf226	Q5I0X4	101 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638		Q6ZN92	141 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	FAM231D	Q6ZW35	169 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	NKAPP1	Q8N9T2	125 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	OCC1	Q8TAD7	63 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	PLEKHB2	Q96CS7	222 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	C20orf78	Q9BR46	151 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	GNB1L	Q9BYB4	327 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	TOMM7	Q9P0U1	55 aa		4.16	□□□□□ -1.74
VPS45-210	ENST00000497638	HIGD1C	A8MV81	97 aa		4.15	□□□□□ -1.75
VPS45-210	ENST00000497638		F8VRH5	84 aa		4.15	□□□□□ -1.75
VPS45-210	ENST00000497638	IFI27	P40305	119 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS45-210	ENST00000497638	ZNF345	Q14585	488 aa		4.15	□□□□□ -1.75
VPS45-210	ENST00000497638	FAM19A1	Q7Z5A9	133 aa		4.15	□□□□□ -1.75
VPS45-210	ENST00000497638		Q8NBF4	154 aa		4.15	□□□□□ -1.75
VPS45-210	ENST00000497638	RPS10P5	Q9NQ39	176 aa		4.15	□□□□□ -1.75
VPS45-210	ENST00000497638	TRBV24-1	A0A075B6N3	115 aa		4.14	□□□□□ -1.75
VPS45-210	ENST00000497638	CXCL5	P42830	114 aa		4.14	□□□□□ -1.75
VPS45-210	ENST00000497638	RPS29	P62273	56 aa	Known RBP	4.14	□□□□□ -1.75
VPS45-210	ENST00000497638	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS45-210	ENST00000497638	SMIM2	Q9BVW6	85 aa		4.14	□□□□□ -1.75
VPS45-210	ENST00000497638	PYGO1	Q9Y3Y4	419 aa		4.14	□□□□□ -1.75
VPS45-210	ENST00000497638	FLG	P20930	4061 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	IGLV8-61	A0A075B6I0	122 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	IGLV4-3	A0A075B6K6	122 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	IGKV2-28	A0A075B6P5	120 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	LINC00862	A6NCI5	91 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	IGKV2D-28	P01615	120 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	TAGLN2	P37802	199 aa	Known RBP	4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	RIG	Q13278	110 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	TEX43	Q6ZNM6	134 aa		4.13	□□□□□ -1.75
VPS45-210	ENST00000497638	CBLN2	Q8IUK8	224 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 138 ms