RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
PBX3-211ENST00000497091 C10orf25Q5T742 122 aa12.15□□□□□ -0.46
PBX3-211ENST00000497091 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
PBX3-211ENST00000497091 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
PBX3-211ENST00000497091 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
PBX3-211ENST00000497091 LINC00474Q9P2X8 69 aa12.15□□□□□ -0.46
PBX3-211ENST00000497091 A0A096LNI7 61 aa12.14□□□□□ -0.47
PBX3-211ENST00000497091 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
PBX3-211ENST00000497091 CKS1BP61024 79 aa12.14□□□□□ -0.47
PBX3-211ENST00000497091 MAJINQ3KP22 176 aa12.14□□□□□ -0.47
PBX3-211ENST00000497091 Q8IZM0 81 aa12.14□□□□□ -0.47
PBX3-211ENST00000497091 SPACA4Q8TDM5 124 aa12.14□□□□□ -0.47
PBX3-211ENST00000497091 CHTOPQ9Y3Y2 248 aaKnown RBP12.14□□□□□ -0.47
PBX3-211ENST00000497091 TRAV12-1A0A0B4J245 112 aa12.13□□□□□ -0.47
PBX3-211ENST00000497091 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
PBX3-211ENST00000497091 GAGE2BQ13066 116 aa12.13□□□□□ -0.47
PBX3-211ENST00000497091 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
PBX3-211ENST00000497091 A0A087WYN8 130 aa12.12□□□□□ -0.47
PBX3-211ENST00000497091 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
PBX3-211ENST00000497091 C6orf48Q9UBA6 75 aa12.12□□□□□ -0.47
PBX3-211ENST00000497091 HSPB8Q9UJY1 196 aa12.12□□□□□ -0.47
PBX3-211ENST00000497091 FABP4P15090 132 aa12.11□□□□□ -0.47
PBX3-211ENST00000497091 Q5VSD8 79 aa12.11□□□□□ -0.47
PBX3-211ENST00000497091 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
PBX3-211ENST00000497091 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
PBX3-211ENST00000497091 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
PBX3-211ENST00000497091 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
PBX3-211ENST00000497091 LINC00528Q8N1L1 170 aa12.1□□□□□ -0.47
PBX3-211ENST00000497091 STPG4Q8N801 248 aa12.1□□□□□ -0.47
PBX3-211ENST00000497091 COX7B2Q8TF08 81 aa12.1□□□□□ -0.47
PBX3-211ENST00000497091 RPL18AQ02543 176 aaKnown RBP12.09□□□□□ -0.47
PBX3-211ENST00000497091 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
PBX3-211ENST00000497091 PLAC8Q9NZF1 115 aa12.09□□□□□ -0.47
PBX3-211ENST00000497091 H0Y8G0 127 aa12.08□□□□□ -0.48
PBX3-211ENST00000497091 CXCL5P42830 114 aa12.08□□□□□ -0.48
PBX3-211ENST00000497091 F8VRH5 84 aa12.07□□□□□ -0.48
PBX3-211ENST00000497091 TLX1NBP0CAT3 122 aa12.07□□□□□ -0.48
PBX3-211ENST00000497091 FAT1Q14517 4588 aa12.06□□□□□ -0.48
PBX3-211ENST00000497091 PLA2G1BP04054 148 aaKnown RBP12.06□□□□□ -0.48
PBX3-211ENST00000497091 IGLV5-39A0A0G2JS06 123 aa12.05□□□□□ -0.48
PBX3-211ENST00000497091 C9orf116Q5BN46 136 aaPredicted RBP12.05□□□□□ -0.48
PBX3-211ENST00000497091 Q6ZRP5 223 aa12.05□□□□□ -0.48
PBX3-211ENST00000497091 ODF1Q14990 250 aa12.04□□□□□ -0.48
PBX3-211ENST00000497091 MAP1LC3CQ9BXW4 147 aa12.04□□□□□ -0.48
PBX3-211ENST00000497091 NDUFC2-KCTD14E9PQ53 114 aa12.03□□□□□ -0.48
PBX3-211ENST00000497091 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
PBX3-211ENST00000497091 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
PBX3-211ENST00000497091 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.49
PBX3-211ENST00000497091 A0A1W2PNN7 141 aa12.01□□□□□ -0.49
PBX3-211ENST00000497091 TMEM223A0PJW6 202 aa12□□□□□ -0.49
PBX3-211ENST00000497091 C7orf33Q8WU49 177 aa12□□□□□ -0.49
PBX3-211ENST00000497091 INAFM2P0DMQ5 153 aa11.98□□□□□ -0.49
PBX3-211ENST00000497091 PLNP26678 52 aa11.98□□□□□ -0.49
PBX3-211ENST00000497091 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
PBX3-211ENST00000497091 DPM2O94777 84 aa11.97□□□□□ -0.49
PBX3-211ENST00000497091 PMCHL2Q9BQD1 86 aa11.97□□□□□ -0.49
PBX3-211ENST00000497091 SYS1-DBNDD2H3BUS1 97 aa11.95□□□□□ -0.5
PBX3-211ENST00000497091 IGKCP01834 107 aa11.95□□□□□ -0.5
PBX3-211ENST00000497091 SFTA2Q6UW10 78 aa11.95□□□□□ -0.5
PBX3-211ENST00000497091 SRRM2Q9UQ35 2752 aaKnown RBP11.94□□□□□ -0.5
PBX3-211ENST00000497091 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
PBX3-211ENST00000497091 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
PBX3-211ENST00000497091 C9orf129Q5T035 196 aaKnown RBP11.93□□□□□ -0.5
PBX3-211ENST00000497091 XAGE1AQ9HD64 81 aa11.93□□□□□ -0.5
PBX3-211ENST00000497091 PFN2P35080 140 aa11.92□□□□□ -0.5
PBX3-211ENST00000497091 KRTAP10-4P60372 401 aaPredicted RBP11.92□□□□□ -0.5
PBX3-211ENST00000497091 PET117Q6UWS5 81 aa11.92□□□□□ -0.5
PBX3-211ENST00000497091 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
PBX3-211ENST00000497091 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
PBX3-211ENST00000497091 HERVK_113P61574 105 aa11.9□□□□□ -0.5
PBX3-211ENST00000497091 COX17Q14061 63 aa11.9□□□□□ -0.5
PBX3-211ENST00000497091 PHF5AQ7RTV0 110 aaKnown RBP11.9□□□□□ -0.5
PBX3-211ENST00000497091 ERG28Q9UKR5 140 aa11.9□□□□□ -0.5
PBX3-211ENST00000497091 LEPROTO15243 131 aa11.89□□□□□ -0.51
PBX3-211ENST00000497091 C3orf79P0CE67 100 aa11.89□□□□□ -0.51
PBX3-211ENST00000497091 KRTDAPP60985 99 aa11.89□□□□□ -0.51
PBX3-211ENST00000497091 S100A6P06703 90 aa11.88□□□□□ -0.51
PBX3-211ENST00000497091 LINC01545Q5VT33 79 aa11.88□□□□□ -0.51
PBX3-211ENST00000497091 PLEKHB2Q96CS7 222 aa11.88□□□□□ -0.51
PBX3-211ENST00000497091 HERC1Q15751 4861 aa11.87□□□□□ -0.51
PBX3-211ENST00000497091 KRTAP7-1Q8IUC3 87 aa11.87□□□□□ -0.51
PBX3-211ENST00000497091 NDUFA12Q9UI09 145 aa11.87□□□□□ -0.51
PBX3-211ENST00000497091 HERV-K104P63124 156 aa11.86□□□□□ -0.51
PBX3-211ENST00000497091 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
PBX3-211ENST00000497091 M0QXV9 152 aa11.85□□□□□ -0.51
PBX3-211ENST00000497091 S100A2P29034 98 aa11.85□□□□□ -0.51
PBX3-211ENST00000497091 LINC00158P58513 81 aa11.85□□□□□ -0.51
PBX3-211ENST00000497091 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
PBX3-211ENST00000497091 J3QQQ9 107 aa11.84□□□□□ -0.51
PBX3-211ENST00000497091 PRR3P79522 188 aaKnown RBP11.84□□□□□ -0.51
PBX3-211ENST00000497091 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
PBX3-211ENST00000497091 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
PBX3-211ENST00000497091 LGALS3P17931 250 aaKnown RBP11.83□□□□□ -0.52
PBX3-211ENST00000497091 HIST3H2BBQ8N257 126 aa11.83□□□□□ -0.52
PBX3-211ENST00000497091 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
PBX3-211ENST00000497091 PLA2G2DQ9UNK4 145 aa11.83□□□□□ -0.52
PBX3-211ENST00000497091 A0A0U1RRA0 63 aa11.82□□□□□ -0.52
PBX3-211ENST00000497091 C20orf202A1L168 122 aa11.82□□□□□ -0.52
PBX3-211ENST00000497091 TSPEAR-AS2P59090 65 aa11.82□□□□□ -0.52
PBX3-211ENST00000497091 LBHQ53QV2 105 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms