RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 SETBP1Q9Y6X0 1596 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 ABCC2Q92887 1545 aa0.25□□□□□ -2.37
TARDBP-210ENST00000496840 SPRR1BP22528 89 aa0.25□□□□□ -2.37
TARDBP-210ENST00000496840 PIEZO1Q92508 2521 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 EDC4Q6P2E9 1401 aaKnown RBP0.24□□□□□ -2.37
TARDBP-210ENST00000496840 K7EQZ3 153 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 SMIM11AP58511 58 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 PEA15Q15121 130 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 USMG5Q96IX5 58 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 POLQO75417 2590 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 NAV2Q8IVL1 2488 aa0.24□□□□□ -2.37
TARDBP-210ENST00000496840 MARF1Q9Y4F3 1742 aaKnown RBP0.24□□□□□ -2.37
TARDBP-210ENST00000496840 CACNA1CQ13936 2221 aa0.23□□□□□ -2.37
TARDBP-210ENST00000496840 BAZ1AQ9NRL2 1556 aaPredicted RBP0.23□□□□□ -2.37
TARDBP-210ENST00000496840 TROQ12816 1431 aaPredicted RBP0.23□□□□□ -2.37
TARDBP-210ENST00000496840 ALKAL2Q6UX46 152 aa0.23□□□□□ -2.37
TARDBP-210ENST00000496840 FXYD6Q9H0Q3 95 aa0.23□□□□□ -2.37
TARDBP-210ENST00000496840 EPRSP07814 1512 aaKnown RBP0.23□□□□□ -2.37
TARDBP-210ENST00000496840 ATP10BO94823 1461 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 CELSR2Q9HCU4 2923 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 NUP188Q5SRE5 1749 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 XRN1Q8IZH2 1706 aaKnown RBP0.22□□□□□ -2.37
TARDBP-210ENST00000496840 COX8AP10176 69 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 GNG2P59768 71 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 PYY3Q5JQD4 70 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 ANK2Q01484 3957 aa0.22□□□□□ -2.37
TARDBP-210ENST00000496840 KNDC1Q76NI1 1749 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 PPRC1Q5VV67 1664 aaKnown RBP0.21□□□□□ -2.38
TARDBP-210ENST00000496840 PDCD11Q14690 1871 aaKnown RBP0.21□□□□□ -2.38
TARDBP-210ENST00000496840 SMARCA2P51531 1590 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 PVALEFA0A1B0GWK0 134 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 K7EP34 96 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 HMGN2P05204 90 aaKnown RBP0.21□□□□□ -2.38
TARDBP-210ENST00000496840 IGLC2P0DOY2 106 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 IGLC3P0DOY3 106 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 S100A16Q96FQ6 103 aaKnown RBP0.21□□□□□ -2.38
TARDBP-210ENST00000496840 CRIPTQ9P021 101 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 F8P00451 2351 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 AKAP12Q02952 1782 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 FANCAO15360 1455 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 A0A0G2JMZ2 1700 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 ANKRD26Q9UPS8 1709 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 ZFHX3Q15911 3703 aa0.21□□□□□ -2.38
TARDBP-210ENST00000496840 ANKRD17O75179 2603 aaKnown RBP0.2□□□□□ -2.38
TARDBP-210ENST00000496840 MYO7BQ6PIF6 2116 aa0.2□□□□□ -2.38
TARDBP-210ENST00000496840 I3L3M4 83 aa0.2□□□□□ -2.38
TARDBP-210ENST00000496840 CYB5AP00167 134 aa0.2□□□□□ -2.38
TARDBP-210ENST00000496840 CCDC141Q6ZP82 1450 aa0.2□□□□□ -2.38
TARDBP-210ENST00000496840 SPTBN2O15020 2390 aa0.2□□□□□ -2.38
TARDBP-210ENST00000496840 TTC37Q6PGP7 1564 aa0.19□□□□□ -2.38
TARDBP-210ENST00000496840 CLTCQ00610 1675 aaKnown RBP0.19□□□□□ -2.38
TARDBP-210ENST00000496840 CPSF4LA6NMK7 179 aaKnown RBP0.19□□□□□ -2.38
TARDBP-210ENST00000496840 KLK9Q2XQG4 91 aa0.19□□□□□ -2.38
TARDBP-210ENST00000496840 C9orf62Q8N4C0 152 aa0.19□□□□□ -2.38
TARDBP-210ENST00000496840 DEFB105AQ8NG35 78 aa0.19□□□□□ -2.38
TARDBP-210ENST00000496840 APLNQ9ULZ1 77 aa0.19□□□□□ -2.38
TARDBP-210ENST00000496840 UBE2D4Q9Y2X8 147 aa0.19□□□□□ -2.38
TARDBP-210ENST00000496840 SLIT1O75093 1534 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 IQSEC2Q5JU85 1478 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 KIAA0556O60303 1618 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 SPINK4O60575 86 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 DEFB112Q30KQ8 113 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 NMSQ5H8A3 153 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 CEP162Q5TB80 1403 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 OTOGQ6ZRI0 2925 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 SAMD9Q5K651 1589 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 CHD9Q3L8U1 2897 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 PLIN4Q96Q06 1357 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 CUX1P39880 1505 aa0.18□□□□□ -2.38
TARDBP-210ENST00000496840 AHCTF1Q8WYP5 2266 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 TARBP1Q13395 1621 aaKnown RBP0.17□□□□□ -2.38
TARDBP-210ENST00000496840 GOLGA4Q13439 2230 aaKnown RBP0.17□□□□□ -2.38
TARDBP-210ENST00000496840 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
TARDBP-210ENST00000496840 IQCF6A8MYZ5 107 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 MAST4O15021 2626 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 PLGLAQ15195 96 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 MON2Q7Z3U7 1717 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 NEXMIFQ5QGS0 1516 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 ZFYVE26Q68DK2 2539 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 C2CD3Q4AC94 2353 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 USF3Q68DE3 2245 aa0.17□□□□□ -2.38
TARDBP-210ENST00000496840 SPTY2D1-AS1A0A0U1RR47 76 aa0.16□□□□□ -2.38
TARDBP-210ENST00000496840 A0A1B0GUT8 65 aa0.16□□□□□ -2.38
TARDBP-210ENST00000496840 SNRPFP62306 86 aaKnown RBP0.16□□□□□ -2.38
TARDBP-210ENST00000496840 PAPPA2Q9BXP8 1791 aa0.16□□□□□ -2.38
TARDBP-210ENST00000496840 PTPRZ1P23471 2315 aaPredicted RBP0.15□□□□□ -2.38
TARDBP-210ENST00000496840 SHPRHQ149N8 1683 aa0.15□□□□□ -2.39
TARDBP-210ENST00000496840 MYMXA0A1B0GTQ4 84 aa0.15□□□□□ -2.39
TARDBP-210ENST00000496840 LOC730098B7Z3J9 87 aa0.15□□□□□ -2.39
TARDBP-210ENST00000496840 LINC00643Q86TS7 51 aa0.15□□□□□ -2.39
TARDBP-210ENST00000496840 RABAC1Q9UI14 185 aa0.15□□□□□ -2.39
TARDBP-210ENST00000496840 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
TARDBP-210ENST00000496840 PLCE1Q9P212 2302 aa0.15□□□□□ -2.39
TARDBP-210ENST00000496840 NKTRP30414 1462 aaKnown RBP0.15□□□□□ -2.39
TARDBP-210ENST00000496840 C5P01031 1676 aa0.14□□□□□ -2.39
TARDBP-210ENST00000496840 ABCC3O15438 1527 aa0.14□□□□□ -2.39
TARDBP-210ENST00000496840 TDRG1Q3Y452 100 aa0.14□□□□□ -2.39
TARDBP-210ENST00000496840 MRPL34Q9BQ48 92 aaKnown RBP0.14□□□□□ -2.39
TARDBP-210ENST00000496840 DNAJC13O75165 2243 aa0.14□□□□□ -2.39
TARDBP-210ENST00000496840 ZNF292O60281 2723 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms