RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 LINC01545Q5VT33 79 aa5.65□□□□□ -1.5
SORT1-208ENST00000495777 SFTA2Q6UW10 78 aa5.65□□□□□ -1.5
SORT1-208ENST00000495777 TNXBP22105 4242 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 GAGE12HA6NDE8 117 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 C11orf86A6NJI1 115 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 USP17L23D6RBM5 183 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 IGKCP01834 107 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 C3orf79P0CE67 100 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 KRTDAPP60985 99 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 HERVK_113P61574 105 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 KRTAP26-1Q6PEX3 210 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 LINC00469Q8N7U9 141 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 C9orf163Q8N9P6 203 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 OR10D4PQ8NGN7 298 aa5.64□□□□□ -1.51
SORT1-208ENST00000495777 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
SORT1-208ENST00000495777 IGLV4-69A0A075B6H9 119 aa5.63□□□□□ -1.51
SORT1-208ENST00000495777 A0A0J9YXV3 536 aa5.63□□□□□ -1.51
SORT1-208ENST00000495777 H0Y8G0 127 aa5.63□□□□□ -1.51
SORT1-208ENST00000495777 PANO1I0J062 215 aa5.63□□□□□ -1.51
SORT1-208ENST00000495777 FOXI1Q12951 378 aa5.63□□□□□ -1.51
SORT1-208ENST00000495777 CIRBPQ14011 172 aaKnown RBP5.63□□□□□ -1.51
SORT1-208ENST00000495777 PKIGQ9Y2B9 76 aa5.63□□□□□ -1.51
SORT1-208ENST00000495777 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.63□□□□□ -1.51
SORT1-208ENST00000495777 CXCL5P42830 114 aa5.62□□□□□ -1.51
SORT1-208ENST00000495777 TMEM170BQ5T4T1 132 aa5.62□□□□□ -1.51
SORT1-208ENST00000495777 SDIM1Q6ZPB5 146 aa5.62□□□□□ -1.51
SORT1-208ENST00000495777 Q6ZRU5 148 aa5.62□□□□□ -1.51
SORT1-208ENST00000495777 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
SORT1-208ENST00000495777 GVQW2A0A096LPI5 108 aaPredicted RBP5.61□□□□□ -1.51
SORT1-208ENST00000495777 HSBP1L1C9JCN9 74 aa5.61□□□□□ -1.51
SORT1-208ENST00000495777 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
SORT1-208ENST00000495777 PRSS2P07478 247 aa5.61□□□□□ -1.51
SORT1-208ENST00000495777 ZNF22P17026 224 aaPredicted RBP5.61□□□□□ -1.51
SORT1-208ENST00000495777 CNBPP62633 177 aaKnown RBP5.61□□□□□ -1.51
SORT1-208ENST00000495777 ZC2HC1BQ5TFG8 222 aa5.61□□□□□ -1.51
SORT1-208ENST00000495777 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
SORT1-208ENST00000495777 LRP2P98164 4655 aa5.6□□□□□ -1.51
SORT1-208ENST00000495777 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.6□□□□□ -1.51
SORT1-208ENST00000495777 COX6A2Q02221 97 aa5.6□□□□□ -1.51
SORT1-208ENST00000495777 C5orf38Q86SI9 138 aa5.6□□□□□ -1.51
SORT1-208ENST00000495777 Q8IZM0 81 aa5.6□□□□□ -1.51
SORT1-208ENST00000495777 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
SORT1-208ENST00000495777 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
SORT1-208ENST00000495777 TMEM223A0PJW6 202 aa5.59□□□□□ -1.51
SORT1-208ENST00000495777 SMIM1B2RUZ4 78 aa5.59□□□□□ -1.51
SORT1-208ENST00000495777 SCGB1D1O95968 90 aa5.59□□□□□ -1.51
SORT1-208ENST00000495777 JOSD1Q15040 202 aaPredicted RBP5.59□□□□□ -1.51
SORT1-208ENST00000495777 ORAOV1Q8WV07 137 aa5.59□□□□□ -1.51
SORT1-208ENST00000495777 PLEKHB2Q96CS7 222 aa5.59□□□□□ -1.51
SORT1-208ENST00000495777 NDUFA1O15239 70 aa5.58□□□□□ -1.52
SORT1-208ENST00000495777 NMUP48645 174 aa5.58□□□□□ -1.52
SORT1-208ENST00000495777 CKS1BP61024 79 aa5.58□□□□□ -1.52
SORT1-208ENST00000495777 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
SORT1-208ENST00000495777 C6orf226Q5I0X4 101 aa5.58□□□□□ -1.52
SORT1-208ENST00000495777 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
SORT1-208ENST00000495777 hDV102S1A0JD36 115 aa5.57□□□□□ -1.52
SORT1-208ENST00000495777 LINC00587B1AMM8 73 aa5.57□□□□□ -1.52
SORT1-208ENST00000495777 E9PLD3 99 aa5.57□□□□□ -1.52
SORT1-208ENST00000495777 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
SORT1-208ENST00000495777 COX7B2Q8TF08 81 aa5.57□□□□□ -1.52
SORT1-208ENST00000495777 A0A087WYN8 130 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 TRBV30A0A0K0K1B3 111 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 LEPROTO15243 131 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 SLPIP03973 132 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 SPINK8P0C7L1 97 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 HERV-K104P63124 156 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 RNF151Q2KHN1 245 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 CAMK2N2Q96S95 79 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 PMCHL2Q9BQD1 86 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
SORT1-208ENST00000495777 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
SORT1-208ENST00000495777 SYCNQ0VAF6 134 aa5.55□□□□□ -1.52
SORT1-208ENST00000495777 CARD19Q96LW7 228 aa5.55□□□□□ -1.52
SORT1-208ENST00000495777 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
SORT1-208ENST00000495777 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
SORT1-208ENST00000495777 MYMXA0A1B0GTQ4 84 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 J3QQQ9 107 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 CHTF8P0CG12 524 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 SMIM6P0DI80 62 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 S100A12P80511 92 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 COX17Q14061 63 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 HIGD2BQ4VC39 106 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 VAMP8Q9BV40 100 aa5.54□□□□□ -1.52
SORT1-208ENST00000495777 LINC01600Q96MT4 127 aa5.53□□□□□ -1.52
SORT1-208ENST00000495777 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
SORT1-208ENST00000495777 PYY3Q5JQD4 70 aa5.52□□□□□ -1.53
SORT1-208ENST00000495777 STPG4Q8N801 248 aa5.52□□□□□ -1.53
SORT1-208ENST00000495777 C7orf33Q8WU49 177 aa5.52□□□□□ -1.53
SORT1-208ENST00000495777 LINC00474Q9P2X8 69 aa5.52□□□□□ -1.53
SORT1-208ENST00000495777 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
SORT1-208ENST00000495777 PRR3P79522 188 aaKnown RBP5.51□□□□□ -1.53
SORT1-208ENST00000495777 ATOH7Q8N100 152 aa5.51□□□□□ -1.53
SORT1-208ENST00000495777 COPS9Q8WXC6 57 aa5.51□□□□□ -1.53
SORT1-208ENST00000495777 DPH3Q96FX2 82 aa5.51□□□□□ -1.53
SORT1-208ENST00000495777 ZNF625Q96I27 306 aaPredicted RBP5.51□□□□□ -1.53
SORT1-208ENST00000495777 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
SORT1-208ENST00000495777 LOC105371267A0A1B0GV96 52 aa5.5□□□□□ -1.53
SORT1-208ENST00000495777 ZNF815PA8K554 130 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms