RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.54□□□□□ -1.52
ITGB1-217ENST00000494395 LINC00614P0C842 121 aa5.54□□□□□ -1.52
ITGB1-217ENST00000494395 CAMK2N2Q96S95 79 aa5.54□□□□□ -1.52
ITGB1-217ENST00000494395 PLAC8Q9NZF1 115 aa5.54□□□□□ -1.52
ITGB1-217ENST00000494395 F8WDY8 70 aa5.53□□□□□ -1.52
ITGB1-217ENST00000494395 PDZD11Q5EBL8 140 aa5.53□□□□□ -1.52
ITGB1-217ENST00000494395 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
ITGB1-217ENST00000494395 MRPL35Q9NZE8 188 aaKnown RBP5.53□□□□□ -1.52
ITGB1-217ENST00000494395 CDKN2A-AS1Q9UH64 79 aa5.53□□□□□ -1.52
ITGB1-217ENST00000494395 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
ITGB1-217ENST00000494395 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
ITGB1-217ENST00000494395 IGLV5-45A0A087WSX0 123 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 IGKV2-24A0A0C4DH68 120 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 A0A0J9YXV3 536 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 LOC107984640A0A0U1RRK4 108 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 INAFM2P0DMQ5 153 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 HERVK_113P63121 156 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 SEC11AP67812 179 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 CST9LQ9H4G1 147 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 PKIGQ9Y2B9 76 aa5.52□□□□□ -1.53
ITGB1-217ENST00000494395 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 COLCA2A8K830 154 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 NDUFA1O15239 70 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 HBDP02042 147 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 TRGC2P03986 189 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 RAB5BP61020 215 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 PMVKQ15126 192 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 PMCHL1Q16048 86 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 MAJINQ3KP22 176 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 UNQ6190/PRO20217Q6UXQ8 127 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 LINC00474Q9P2X8 69 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
ITGB1-217ENST00000494395 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-217ENST00000494395 SMIM1B2RUZ4 78 aa5.5□□□□□ -1.53
ITGB1-217ENST00000494395 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
ITGB1-217ENST00000494395 C2orf82Q6UX34 121 aa5.5□□□□□ -1.53
ITGB1-217ENST00000494395 Q8IZM0 81 aa5.5□□□□□ -1.53
ITGB1-217ENST00000494395 STPG4Q8N801 248 aa5.5□□□□□ -1.53
ITGB1-217ENST00000494395 CHCHD1Q96BP2 118 aaKnown RBP5.5□□□□□ -1.53
ITGB1-217ENST00000494395 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
ITGB1-217ENST00000494395 TRBV30A0A0K0K1B3 111 aa5.49□□□□□ -1.53
ITGB1-217ENST00000494395 IGLC3P0DOY3 106 aa5.49□□□□□ -1.53
ITGB1-217ENST00000494395 RPL37AP61513 92 aaKnown RBP5.49□□□□□ -1.53
ITGB1-217ENST00000494395 Q6ZRP5 223 aa5.49□□□□□ -1.53
ITGB1-217ENST00000494395 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
ITGB1-217ENST00000494395 SCO1O75880 301 aa5.48□□□□□ -1.53
ITGB1-217ENST00000494395 ATP5LO75964 103 aa5.48□□□□□ -1.53
ITGB1-217ENST00000494395 HNRNPA3P51991 378 aaKnown RBP5.48□□□□□ -1.53
ITGB1-217ENST00000494395 GAGE2BQ13066 116 aa5.48□□□□□ -1.53
ITGB1-217ENST00000494395 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
ITGB1-217ENST00000494395 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
ITGB1-217ENST00000494395 ZNF22P17026 224 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-217ENST00000494395 RPL18AQ02543 176 aaKnown RBP5.47□□□□□ -1.53
ITGB1-217ENST00000494395 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
ITGB1-217ENST00000494395 C9orf116Q5BN46 136 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-217ENST00000494395 DPH3Q96FX2 82 aa5.47□□□□□ -1.53
ITGB1-217ENST00000494395 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
ITGB1-217ENST00000494395 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
ITGB1-217ENST00000494395 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
ITGB1-217ENST00000494395 NDUFC2-KCTD14E9PQ53 114 aa5.46□□□□□ -1.54
ITGB1-217ENST00000494395 PRSS2P07478 247 aa5.46□□□□□ -1.54
ITGB1-217ENST00000494395 C6orf226Q5I0X4 101 aa5.46□□□□□ -1.54
ITGB1-217ENST00000494395 KRTAP7-1Q8IUC3 87 aa5.46□□□□□ -1.54
ITGB1-217ENST00000494395 IFI27L1Q96BM0 104 aa5.46□□□□□ -1.54
ITGB1-217ENST00000494395 PACRGQ96M98 296 aaPredicted RBP5.46□□□□□ -1.54
ITGB1-217ENST00000494395 TRAV12-1A0A0B4J245 112 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 C11orf86A6NJI1 115 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 F8VRH5 84 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 NUPR1O60356 82 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 SERF1AO75920 110 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 SCGB1D1O95968 90 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 SPINK8P0C7L1 97 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 CXCL5P42830 114 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 SERTAD4-AS1Q5TG53 156 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 BAGE3Q86Y29 109 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 FAM19A2Q8N3H0 131 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 C7orf33Q8WU49 177 aa5.45□□□□□ -1.54
ITGB1-217ENST00000494395 HSBP1O75506 76 aa5.44□□□□□ -1.54
ITGB1-217ENST00000494395 NDUFA6P56556 154 aa5.44□□□□□ -1.54
ITGB1-217ENST00000494395 CKS1BP61024 79 aa5.44□□□□□ -1.54
ITGB1-217ENST00000494395 PRR3P79522 188 aaKnown RBP5.44□□□□□ -1.54
ITGB1-217ENST00000494395 C9orf129Q5T035 196 aaKnown RBP5.44□□□□□ -1.54
ITGB1-217ENST00000494395 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
ITGB1-217ENST00000494395 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
ITGB1-217ENST00000494395 H3BRM9 83 aa5.43□□□□□ -1.54
ITGB1-217ENST00000494395 CHTOPQ9Y3Y2 248 aaKnown RBP5.43□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BKO60814 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BJP06899 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BOP23527 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BBP33778 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BDP58876 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BCP62807 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST2H2BEQ16778 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-217ENST00000494395 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BHQ93079 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 HIST1H2BNQ99877 126 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms