RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 UQCC3Q6UW78 93 aa5.32□□□□□ -1.56
NUP50-217ENST00000491860 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
NUP50-217ENST00000491860 LINC00173Q6ZV60 143 aa5.32□□□□□ -1.56
NUP50-217ENST00000491860 ERASQ7Z444 233 aa5.32□□□□□ -1.56
NUP50-217ENST00000491860 TOMM6Q96B49 74 aa5.32□□□□□ -1.56
NUP50-217ENST00000491860 TOMM7Q9P0U1 55 aa5.32□□□□□ -1.56
NUP50-217ENST00000491860 CARHSP1Q9Y2V2 147 aaKnown RBP5.32□□□□□ -1.56
NUP50-217ENST00000491860 S100PP25815 95 aa5.31□□□□□ -1.56
NUP50-217ENST00000491860 CLLU1Q5K131 121 aa5.31□□□□□ -1.56
NUP50-217ENST00000491860 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
NUP50-217ENST00000491860 TINCRA0A1B0GVN0 87 aa5.3□□□□□ -1.56
NUP50-217ENST00000491860 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
NUP50-217ENST00000491860 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
NUP50-217ENST00000491860 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
NUP50-217ENST00000491860 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
NUP50-217ENST00000491860 ZNF861PO60384 105 aa5.29□□□□□ -1.56
NUP50-217ENST00000491860 LINC00469Q8N7U9 141 aa5.29□□□□□ -1.56
NUP50-217ENST00000491860 PRR26Q8N8Z3 221 aa5.29□□□□□ -1.56
NUP50-217ENST00000491860 GNB1LQ9BYB4 327 aa5.29□□□□□ -1.56
NUP50-217ENST00000491860 MRPL18Q9H0U6 180 aaKnown RBP5.29□□□□□ -1.56
NUP50-217ENST00000491860 C22orf24Q9Y442 160 aa5.29□□□□□ -1.56
NUP50-217ENST00000491860 H3BRM9 83 aa5.28□□□□□ -1.56
NUP50-217ENST00000491860 RPL28P46779 137 aaKnown RBP5.28□□□□□ -1.56
NUP50-217ENST00000491860 ZC2HC1BQ5TFG8 222 aa5.28□□□□□ -1.56
NUP50-217ENST00000491860 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
NUP50-217ENST00000491860 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
NUP50-217ENST00000491860 SMCO4Q9NRQ5 59 aa5.28□□□□□ -1.56
NUP50-217ENST00000491860 IGLV5-45A0A087WSX0 123 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 TMEM218A2RU14 115 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 LINC01546A6NGU7 62 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 FA2HQ7L5A8 372 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 MRPL55Q7Z7F7 128 aaKnown RBP5.27□□□□□ -1.57
NUP50-217ENST00000491860 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 COX7B2Q8TF08 81 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 SEC11CQ9BY50 192 aa5.27□□□□□ -1.57
NUP50-217ENST00000491860 SMIM1B2RUZ4 78 aa5.26□□□□□ -1.57
NUP50-217ENST00000491860 BCE1O60756 84 aa5.26□□□□□ -1.57
NUP50-217ENST00000491860 PMVKQ15126 192 aa5.26□□□□□ -1.57
NUP50-217ENST00000491860 KIAA1644Q3SXP7 199 aa5.26□□□□□ -1.57
NUP50-217ENST00000491860 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
NUP50-217ENST00000491860 XAGE1AQ9HD64 81 aa5.26□□□□□ -1.57
NUP50-217ENST00000491860 ATP5LO75964 103 aa5.25□□□□□ -1.57
NUP50-217ENST00000491860 NKAPP1Q8N9T2 125 aa5.25□□□□□ -1.57
NUP50-217ENST00000491860 CST9LQ9H4G1 147 aa5.25□□□□□ -1.57
NUP50-217ENST00000491860 LPAP08519 4548 aa5.24□□□□□ -1.57
NUP50-217ENST00000491860 IGLV5-37A0A075B6J1 123 aa5.24□□□□□ -1.57
NUP50-217ENST00000491860 ADCYAP1P18509 176 aa5.24□□□□□ -1.57
NUP50-217ENST00000491860 RHEBQ15382 184 aa5.24□□□□□ -1.57
NUP50-217ENST00000491860 CRYGAP11844 174 aa5.23□□□□□ -1.57
NUP50-217ENST00000491860 FABP9Q0Z7S8 132 aa5.23□□□□□ -1.57
NUP50-217ENST00000491860 IGLC3P0DOY3 106 aa5.22□□□□□ -1.57
NUP50-217ENST00000491860 RAB5BP61020 215 aa5.22□□□□□ -1.57
NUP50-217ENST00000491860 CTAG1AP78358 180 aa5.22□□□□□ -1.57
NUP50-217ENST00000491860 COX17Q14061 63 aa5.22□□□□□ -1.57
NUP50-217ENST00000491860 LINC00167Q96N53 147 aa5.22□□□□□ -1.57
NUP50-217ENST00000491860 SPINK8P0C7L1 97 aa5.21□□□□□ -1.58
NUP50-217ENST00000491860 UBE2AP49459 152 aa5.21□□□□□ -1.58
NUP50-217ENST00000491860 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.58
NUP50-217ENST00000491860 PRR4Q16378 134 aa5.21□□□□□ -1.58
NUP50-217ENST00000491860 TYMSOSQ8TAI1 123 aa5.21□□□□□ -1.58
NUP50-217ENST00000491860 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 IGLV5-39A0A0G2JS06 123 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 HBDP02042 147 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 LINC00614P0C842 121 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 FAM229BQ4G0N7 80 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 C10orf91Q5T1B1 145 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 COMMD7Q86VX2 200 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 RPS10P5Q9NQ39 176 aa5.2□□□□□ -1.58
NUP50-217ENST00000491860 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
NUP50-217ENST00000491860 NDUFA6P56556 154 aa5.19□□□□□ -1.58
NUP50-217ENST00000491860 TRAPPC1Q9Y5R8 145 aa5.19□□□□□ -1.58
NUP50-217ENST00000491860 MUC2Q02817 5179 aa5.19□□□□□ -1.58
NUP50-217ENST00000491860 ZNF22P17026 224 aaPredicted RBP5.18□□□□□ -1.58
NUP50-217ENST00000491860 PFN2P35080 140 aa5.18□□□□□ -1.58
NUP50-217ENST00000491860 NDUFA5Q16718 116 aa5.18□□□□□ -1.58
NUP50-217ENST00000491860 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
NUP50-217ENST00000491860 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 SNAPINO95295 136 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 IFITM2Q01629 132 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 BAGE3Q86Y29 109 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 C18orf32Q8TCD1 76 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 SND1-IT1Q9HBX3 110 aa5.17□□□□□ -1.58
NUP50-217ENST00000491860 IGKV2-28A0A075B6P5 120 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 A0A087X002 238 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 IGKV2D-26A0A0A0MRZ7 120 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 TMEM170BQ5T4T1 132 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 TMEM126AQ9H061 195 aa5.16□□□□□ -1.58
NUP50-217ENST00000491860 A0A096LNJ9 63 aa5.15□□□□□ -1.59
NUP50-217ENST00000491860 LINC00587B1AMM8 73 aa5.15□□□□□ -1.59
NUP50-217ENST00000491860 TSPAN13O95857 204 aa5.15□□□□□ -1.59
NUP50-217ENST00000491860 VPREB1P12018 145 aa5.15□□□□□ -1.59
NUP50-217ENST00000491860 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
NUP50-217ENST00000491860 SVBPQ8N300 66 aa5.15□□□□□ -1.59
NUP50-217ENST00000491860 CHCHD1Q96BP2 118 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms