RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 A0A096LNI7 61 aa12.5□□□□□ -0.41
SEC22A-209ENST00000491366 ZNF22P17026 224 aaPredicted RBP12.5□□□□□ -0.41
SEC22A-209ENST00000491366 CKS1BP61024 79 aa12.5□□□□□ -0.41
SEC22A-209ENST00000491366 Q8IZM0 81 aa12.5□□□□□ -0.41
SEC22A-209ENST00000491366 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
SEC22A-209ENST00000491366 MRPL35Q9NZE8 188 aaKnown RBP12.5□□□□□ -0.41
SEC22A-209ENST00000491366 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
SEC22A-209ENST00000491366 LOC107984640A0A0U1RRK4 108 aa12.49□□□□□ -0.41
SEC22A-209ENST00000491366 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
SEC22A-209ENST00000491366 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
SEC22A-209ENST00000491366 RPL18AQ02543 176 aaKnown RBP12.48□□□□□ -0.41
SEC22A-209ENST00000491366 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
SEC22A-209ENST00000491366 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
SEC22A-209ENST00000491366 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
SEC22A-209ENST00000491366 COX7B2Q8TF08 81 aa12.48□□□□□ -0.41
SEC22A-209ENST00000491366 F8VRH5 84 aa12.47□□□□□ -0.41
SEC22A-209ENST00000491366 RNF151Q2KHN1 245 aa12.47□□□□□ -0.41
SEC22A-209ENST00000491366 Q8N1X5 172 aa12.47□□□□□ -0.41
SEC22A-209ENST00000491366 CIRBPQ14011 172 aaKnown RBP12.46□□□□□ -0.41
SEC22A-209ENST00000491366 ODF1Q14990 250 aa12.45□□□□□ -0.42
SEC22A-209ENST00000491366 A0A087WYN8 130 aa12.44□□□□□ -0.42
SEC22A-209ENST00000491366 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
SEC22A-209ENST00000491366 PTTG1IPP53801 180 aa12.44□□□□□ -0.42
SEC22A-209ENST00000491366 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
SEC22A-209ENST00000491366 COA6Q5JTJ3 125 aaKnown RBP12.44□□□□□ -0.42
SEC22A-209ENST00000491366 MAP1LC3CQ9BXW4 147 aa12.44□□□□□ -0.42
SEC22A-209ENST00000491366 LINC00474Q9P2X8 69 aa12.43□□□□□ -0.42
SEC22A-209ENST00000491366 IGLV5-39A0A0G2JS06 123 aa12.42□□□□□ -0.42
SEC22A-209ENST00000491366 CXCL5P42830 114 aa12.42□□□□□ -0.42
SEC22A-209ENST00000491366 LINC00528Q8N1L1 170 aa12.42□□□□□ -0.42
SEC22A-209ENST00000491366 STPG4Q8N801 248 aa12.42□□□□□ -0.42
SEC22A-209ENST00000491366 PMCHL2Q9BQD1 86 aa12.42□□□□□ -0.42
SEC22A-209ENST00000491366 Q5VSD8 79 aa12.41□□□□□ -0.42
SEC22A-209ENST00000491366 KRTAP4-5Q9BYR2 181 aa12.41□□□□□ -0.42
SEC22A-209ENST00000491366 EPM2AB3EWF7 344 aa12.4□□□□□ -0.42
SEC22A-209ENST00000491366 GAGE2EQ4V326 116 aa12.4□□□□□ -0.42
SEC22A-209ENST00000491366 GAGE2DQ9UEU5 116 aa12.4□□□□□ -0.42
SEC22A-209ENST00000491366 TMEM223A0PJW6 202 aa12.39□□□□□ -0.43
SEC22A-209ENST00000491366 FAM229AH3BQW9 127 aa12.39□□□□□ -0.43
SEC22A-209ENST00000491366 TLX1NBP0CAT3 122 aa12.39□□□□□ -0.43
SEC22A-209ENST00000491366 Q6ZRP5 223 aa12.39□□□□□ -0.43
SEC22A-209ENST00000491366 PLAC8Q9NZF1 115 aa12.39□□□□□ -0.43
SEC22A-209ENST00000491366 PLNP26678 52 aa12.38□□□□□ -0.43
SEC22A-209ENST00000491366 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
SEC22A-209ENST00000491366 SYS1-DBNDD2H3BUS1 97 aa12.37□□□□□ -0.43
SEC22A-209ENST00000491366 DPM2O94777 84 aa12.37□□□□□ -0.43
SEC22A-209ENST00000491366 IGKCP01834 107 aa12.35□□□□□ -0.43
SEC22A-209ENST00000491366 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
SEC22A-209ENST00000491366 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
SEC22A-209ENST00000491366 KRTDAPP60985 99 aa12.33□□□□□ -0.44
SEC22A-209ENST00000491366 S100A6P06703 90 aa12.32□□□□□ -0.44
SEC22A-209ENST00000491366 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
SEC22A-209ENST00000491366 FAM168BA1KXE4 195 aa12.31□□□□□ -0.44
SEC22A-209ENST00000491366 PLA2G1BP04054 148 aaKnown RBP12.31□□□□□ -0.44
SEC22A-209ENST00000491366 PET117Q6UWS5 81 aa12.31□□□□□ -0.44
SEC22A-209ENST00000491366 C9orf129Q5T035 196 aaKnown RBP12.3□□□□□ -0.44
SEC22A-209ENST00000491366 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
SEC22A-209ENST00000491366 FAM19A5Q7Z5A7 132 aaPredicted RBP12.3□□□□□ -0.44
SEC22A-209ENST00000491366 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
SEC22A-209ENST00000491366 S100A2P29034 98 aa12.29□□□□□ -0.44
SEC22A-209ENST00000491366 PFN2P35080 140 aa12.29□□□□□ -0.44
SEC22A-209ENST00000491366 RPL37AP61513 92 aaKnown RBP12.29□□□□□ -0.44
SEC22A-209ENST00000491366 HERVK_113P61574 105 aa12.29□□□□□ -0.44
SEC22A-209ENST00000491366 HIST3H2BBQ8N257 126 aa12.29□□□□□ -0.44
SEC22A-209ENST00000491366 C7orf33Q8WU49 177 aa12.29□□□□□ -0.44
SEC22A-209ENST00000491366 FAT1Q14517 4588 aa12.29□□□□□ -0.44
SEC22A-209ENST00000491366 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
SEC22A-209ENST00000491366 ERG28Q9UKR5 140 aa12.28□□□□□ -0.44
SEC22A-209ENST00000491366 LEPROTO15243 131 aa12.27□□□□□ -0.45
SEC22A-209ENST00000491366 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
SEC22A-209ENST00000491366 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
SEC22A-209ENST00000491366 PHF5AQ7RTV0 110 aaKnown RBP12.25□□□□□ -0.45
SEC22A-209ENST00000491366 HIST1H2BLQ99880 126 aa12.25□□□□□ -0.45
SEC22A-209ENST00000491366 NDUFA12Q9UI09 145 aa12.25□□□□□ -0.45
SEC22A-209ENST00000491366 C20orf202A1L168 122 aa12.24□□□□□ -0.45
SEC22A-209ENST00000491366 SNRPEP62304 92 aaKnown RBP12.24□□□□□ -0.45
SEC22A-209ENST00000491366 J3QQQ9 107 aa12.23□□□□□ -0.45
SEC22A-209ENST00000491366 KRTAP7-1Q8IUC3 87 aa12.23□□□□□ -0.45
SEC22A-209ENST00000491366 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 A0A0U1RRA0 63 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 MYMXA0A1B0GTQ4 84 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 M0QXV9 152 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 INAFM2P0DMQ5 153 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
SEC22A-209ENST00000491366 LINC00158P58513 81 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
SEC22A-209ENST00000491366 SERTAD4-AS1Q5TG53 156 aa12.22□□□□□ -0.45
SEC22A-209ENST00000491366 COX17Q14061 63 aa12.21□□□□□ -0.45
SEC22A-209ENST00000491366 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.45
SEC22A-209ENST00000491366 ABCA13Q86UQ4 5058 aa12.2□□□□□ -0.46
SEC22A-209ENST00000491366 E9PLD3 99 aa12.2□□□□□ -0.46
SEC22A-209ENST00000491366 HERV-K104P63124 156 aa12.2□□□□□ -0.46
SEC22A-209ENST00000491366 SMIM13P0DJ93 91 aa12.19□□□□□ -0.46
SEC22A-209ENST00000491366 ATOH7Q8N100 152 aa12.19□□□□□ -0.46
SEC22A-209ENST00000491366 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
SEC22A-209ENST00000491366 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
SEC22A-209ENST00000491366 C5orf52A6NGY3 159 aa12.17□□□□□ -0.46
SEC22A-209ENST00000491366 NMUP48645 174 aa12.17□□□□□ -0.46
SEC22A-209ENST00000491366 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
SEC22A-209ENST00000491366 UBE2BP63146 152 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms