RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SPINK8P0C7L1 97 aa10.17□□□□□ -0.78
TRA2A-208ENST00000490942 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
TRA2A-208ENST00000490942 LINC01620Q4KN68 170 aa10.17□□□□□ -0.78
TRA2A-208ENST00000490942 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
TRA2A-208ENST00000490942 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
TRA2A-208ENST00000490942 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
TRA2A-208ENST00000490942 TMEM223A0PJW6 202 aa10.16□□□□□ -0.78
TRA2A-208ENST00000490942 H0Y8G0 127 aa10.16□□□□□ -0.78
TRA2A-208ENST00000490942 TLX1NBP0CAT3 122 aa10.16□□□□□ -0.78
TRA2A-208ENST00000490942 HIST3H2BBQ8N257 126 aa10.16□□□□□ -0.78
TRA2A-208ENST00000490942 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
TRA2A-208ENST00000490942 IGKCP01834 107 aa10.15□□□□□ -0.78
TRA2A-208ENST00000490942 S100A2P29034 98 aa10.15□□□□□ -0.78
TRA2A-208ENST00000490942 AKR1D1P51857 326 aa10.15□□□□□ -0.78
TRA2A-208ENST00000490942 LINC01545Q5VT33 79 aa10.15□□□□□ -0.78
TRA2A-208ENST00000490942 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.78
TRA2A-208ENST00000490942 LCE2AQ5TA79 106 aaPredicted RBP10.14□□□□□ -0.79
TRA2A-208ENST00000490942 FAM30AQ9NZY2 134 aa10.14□□□□□ -0.79
TRA2A-208ENST00000490942 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
TRA2A-208ENST00000490942 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
TRA2A-208ENST00000490942 XGP55808 180 aa10.13□□□□□ -0.79
TRA2A-208ENST00000490942 C10orf25Q5T742 122 aa10.13□□□□□ -0.79
TRA2A-208ENST00000490942 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
TRA2A-208ENST00000490942 DNAH8Q96JB1 4490 aa10.13□□□□□ -0.79
TRA2A-208ENST00000490942 C20orf202A1L168 122 aa10.12□□□□□ -0.79
TRA2A-208ENST00000490942 C5orf52A6NGY3 159 aa10.12□□□□□ -0.79
TRA2A-208ENST00000490942 HIST1H2BLQ99880 126 aa10.12□□□□□ -0.79
TRA2A-208ENST00000490942 KRTDAPP60985 99 aa10.11□□□□□ -0.79
TRA2A-208ENST00000490942 HERVK_113P61574 105 aa10.11□□□□□ -0.79
TRA2A-208ENST00000490942 SPACA4Q8TDM5 124 aa10.11□□□□□ -0.79
TRA2A-208ENST00000490942 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
TRA2A-208ENST00000490942 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
TRA2A-208ENST00000490942 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
TRA2A-208ENST00000490942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
TRA2A-208ENST00000490942 APOBP04114 4563 aaKnown RBP10.1□□□□□ -0.79
TRA2A-208ENST00000490942 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
TRA2A-208ENST00000490942 A0A096LNI7 61 aa10.09□□□□□ -0.79
TRA2A-208ENST00000490942 SCXQ7RTU7 201 aa10.09□□□□□ -0.79
TRA2A-208ENST00000490942 PMCHL2Q9BQD1 86 aa10.09□□□□□ -0.79
TRA2A-208ENST00000490942 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
TRA2A-208ENST00000490942 PLEKHB2Q96CS7 222 aa10.08□□□□□ -0.8
TRA2A-208ENST00000490942 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
TRA2A-208ENST00000490942 LEPROTO15243 131 aa10.07□□□□□ -0.8
TRA2A-208ENST00000490942 COX17Q14061 63 aa10.07□□□□□ -0.8
TRA2A-208ENST00000490942 PLAC8Q9NZF1 115 aa10.07□□□□□ -0.8
TRA2A-208ENST00000490942 RYR1P21817 5038 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 IGKV2-24A0A0C4DH68 120 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 EPM2AB3EWF7 344 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 PANO1I0J062 215 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 CHTF8P0CG12 524 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
TRA2A-208ENST00000490942 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 Q6ZRP5 223 aa10.06□□□□□ -0.8
TRA2A-208ENST00000490942 E9PLD3 99 aa10.05□□□□□ -0.8
TRA2A-208ENST00000490942 NMUP48645 174 aa10.05□□□□□ -0.8
TRA2A-208ENST00000490942 HERV-K104P63124 156 aa10.05□□□□□ -0.8
TRA2A-208ENST00000490942 MAJINQ3KP22 176 aa10.05□□□□□ -0.8
TRA2A-208ENST00000490942 A0A087WYN8 130 aa10.04□□□□□ -0.8
TRA2A-208ENST00000490942 LINC00587B1AMM8 73 aa10.04□□□□□ -0.8
TRA2A-208ENST00000490942 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
TRA2A-208ENST00000490942 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
TRA2A-208ENST00000490942 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
TRA2A-208ENST00000490942 J3QQQ9 107 aa10.03□□□□□ -0.8
TRA2A-208ENST00000490942 Q8N1X5 172 aa10.02□□□□□ -0.81
TRA2A-208ENST00000490942 STPG4Q8N801 248 aa10.02□□□□□ -0.81
TRA2A-208ENST00000490942 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.81
TRA2A-208ENST00000490942 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
TRA2A-208ENST00000490942 HSPG2P98160 4391 aa10.01□□□□□ -0.81
TRA2A-208ENST00000490942 LGALS3P17931 250 aaKnown RBP10.01□□□□□ -0.81
TRA2A-208ENST00000490942 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
TRA2A-208ENST00000490942 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
TRA2A-208ENST00000490942 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
TRA2A-208ENST00000490942 HERC2O95714 4834 aa9.98□□□□□ -0.81
TRA2A-208ENST00000490942 HAMPP81172 84 aa9.98□□□□□ -0.81
TRA2A-208ENST00000490942 C9orf129Q5T035 196 aaKnown RBP9.98□□□□□ -0.81
TRA2A-208ENST00000490942 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
TRA2A-208ENST00000490942 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
TRA2A-208ENST00000490942 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
TRA2A-208ENST00000490942 A0A1W2PNN7 141 aa9.96□□□□□ -0.82
TRA2A-208ENST00000490942 PFN2P35080 140 aa9.96□□□□□ -0.82
TRA2A-208ENST00000490942 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
TRA2A-208ENST00000490942 LINC00528Q8N1L1 170 aa9.95□□□□□ -0.82
TRA2A-208ENST00000490942 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
TRA2A-208ENST00000490942 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
TRA2A-208ENST00000490942 SMR3BP02814 79 aaPredicted RBP9.94□□□□□ -0.82
TRA2A-208ENST00000490942 LINC00158P58513 81 aa9.94□□□□□ -0.82
TRA2A-208ENST00000490942 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
TRA2A-208ENST00000490942 IGKV2D-26A0A0A0MRZ7 120 aa9.93□□□□□ -0.82
TRA2A-208ENST00000490942 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
TRA2A-208ENST00000490942 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
TRA2A-208ENST00000490942 ATOH7Q8N100 152 aa9.93□□□□□ -0.82
TRA2A-208ENST00000490942 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
TRA2A-208ENST00000490942 SCGB1D1O95968 90 aa9.92□□□□□ -0.82
TRA2A-208ENST00000490942 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
TRA2A-208ENST00000490942 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
TRA2A-208ENST00000490942 Q5VSD8 79 aa9.92□□□□□ -0.82
TRA2A-208ENST00000490942 TMA7Q9Y2S6 64 aaKnown RBP9.92□□□□□ -0.82
TRA2A-208ENST00000490942 IGLV5-37A0A075B6J1 123 aa9.91□□□□□ -0.82
TRA2A-208ENST00000490942 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
TRA2A-208ENST00000490942 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms