RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	IGHV4-28	A0A0C4DH34	117 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	MAL	P21145	153 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	LELP1	Q5T871	98 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833		Q6Q795	121 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	IMUP	Q9GZP8	106 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	SND1-IT1	Q9HBX3	110 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833		Q9UF83	564 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833		X6R8D5	127 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	APC	P25054	2843 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	MXRA5	Q9NR99	2828 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	ABCA12	Q86UK0	2595 aa		4.44	□□□□□ -1.7
FN1-223	ENST00000490833	POLQ	O75417	2590 aa		4.43	□□□□□ -1.7
FN1-223	ENST00000490833	TMEM126A	Q9H061	195 aa		4.43	□□□□□ -1.7
FN1-223	ENST00000490833	KLK5	Q9Y337	293 aa	Predicted RBP	4.43	□□□□□ -1.7
FN1-223	ENST00000490833	NACA	E9PAV3	2078 aa		4.42	□□□□□ -1.7
FN1-223	ENST00000490833	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.42	□□□□□ -1.7
FN1-223	ENST00000490833	TOMM7	Q9P0U1	55 aa		4.42	□□□□□ -1.7
FN1-223	ENST00000490833	ITPR3	Q14573	2671 aa		4.42	□□□□□ -1.7
FN1-223	ENST00000490833	NBPF19	A0A087WUL8	3843 aa		4.42	□□□□□ -1.7
FN1-223	ENST00000490833	TLN2	Q9Y4G6	2542 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	FBN2	P35556	2912 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	INAFM1	C9JVW0	142 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	REG3A	Q06141	175 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	GAGE2B	Q13066	116 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	GAGE2E	Q4V326	116 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	S100A7L2	Q5SY68	101 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	MIR7-3HG	Q8N6C7	128 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	DAND5	Q8N907	189 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	NTN5	Q8WTR8	489 aa	Predicted RBP	4.41	□□□□□ -1.7
FN1-223	ENST00000490833	GAGE2D	Q9UEU5	116 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	MAP1A	P78559	2803 aa	Predicted RBP	4.41	□□□□□ -1.7
FN1-223	ENST00000490833	SVEP1	Q4LDE5	3571 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	CENPE	Q02224	2701 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	CELSR2	Q9HCU4	2923 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	CRYBG3	Q68DQ2	2970 aa		4.41	□□□□□ -1.7
FN1-223	ENST00000490833	CELSR1	Q9NYQ6	3014 aa		4.4	□□□□□ -1.7
FN1-223	ENST00000490833	CSMD1	Q96PZ7	3565 aa		4.4	□□□□□ -1.7
FN1-223	ENST00000490833	IGLV4-60	A0A075B6I1	120 aa		4.4	□□□□□ -1.71
FN1-223	ENST00000490833	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.4	□□□□□ -1.71
FN1-223	ENST00000490833	TMEM256-PLSCR3	K7ERE1	68 aa		4.4	□□□□□ -1.71
FN1-223	ENST00000490833	ANG	P03950	147 aa	Known RBP	4.4	□□□□□ -1.71
FN1-223	ENST00000490833	BAALC-AS2	P0C853	105 aa		4.4	□□□□□ -1.71
FN1-223	ENST00000490833	TTC32	Q5I0X7	151 aa		4.4	□□□□□ -1.71
FN1-223	ENST00000490833		Q8NAQ8	132 aa		4.4	□□□□□ -1.71
FN1-223	ENST00000490833	WFDC10A	Q9H1F0	79 aa		4.4	□□□□□ -1.71
FN1-223	ENST00000490833	C11orf68	Q9H3H3	251 aa	Known RBP	4.4	□□□□□ -1.71
FN1-223	ENST00000490833	CCDC168	Q8NDH2	2452 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833		A0A0J9YWU9	116 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	LOC100131303	A0A0U1RQF7	123 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	IGHV4-30-4	P0DP06	118 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	PDE6G	P18545	87 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	XCL1	P47992	114 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	KRTAP10-3	P60369	221 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	DEFB135	Q30KP9	77 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	C5orf38	Q86SI9	138 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-223	ENST00000490833	PRR34	Q9NV39	138 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	VPS13C	Q709C8	3753 aa		4.39	□□□□□ -1.71
FN1-223	ENST00000490833	FLNA	P21333	2647 aa	Known RBP	4.39	□□□□□ -1.71
FN1-223	ENST00000490833	IGKV3OR2-268	A0A0C4DH90	116 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	CCL18	P55774	89 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	NPC2	P61916	151 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	EGFEM1P	Q0D2K5	195 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	LINC00643	Q86TS7	51 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	LINC00269	Q8N2A0	174 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	C15orf53	Q8NAA6	179 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	OR13C6P	Q8NH95	151 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	CDIP1	Q9H305	208 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	NOTCH2	Q04721	2471 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	ZAN	Q9Y493	2812 aa		4.38	□□□□□ -1.71
FN1-223	ENST00000490833	TRBV7-6	A0A0J9YX20	115 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	TEX49	A0A1B0GTD5	131 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	PFN2	P35080	140 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	C3orf56	Q8N813	242 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	SMR3A	Q99954	134 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	ORMDL1	Q9P0S3	153 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	WNK1	Q9H4A3	2382 aa		4.37	□□□□□ -1.71
FN1-223	ENST00000490833	SON	P18583	2426 aa	Known RBP	4.37	□□□□□ -1.71
FN1-223	ENST00000490833		A0A0U1RRA0	63 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	LYPD5	Q6UWN5	251 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	SOSTDC1	Q6X4U4	206 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	SMIM11B	Q8TCY0	68 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	CLEC2B	Q92478	149 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	RMI2	Q96E14	147 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	C2orf48	Q96LS8	159 aa		4.36	□□□□□ -1.71
FN1-223	ENST00000490833	ZNF561-AS1	K7EIQ3	104 aa		4.35	□□□□□ -1.71
FN1-223	ENST00000490833	KIAA0087	Q14695	138 aa		4.35	□□□□□ -1.71
FN1-223	ENST00000490833	PDZD2	O15018	2839 aa		4.35	□□□□□ -1.71
FN1-223	ENST00000490833	IGKV2-28	A0A075B6P5	120 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833		A0A096LPF7	62 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	TRBV7-7	A0A0K0K1E9	115 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	IGKV2D-28	P01615	120 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	KRTAP10-2	P60368	255 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	SPAG11B	Q08648	103 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	ATP5EP2	Q5VTU8	51 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	LINC00337	Q8N6G1	96 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	ANAPC13	Q9BS18	74 aa		4.34	□□□□□ -1.71
FN1-223	ENST00000490833	ITPR2	Q14571	2701 aa		4.34	□□□□□ -1.72
FN1-223	ENST00000490833	XG	P55808	180 aa		4.33	□□□□□ -1.72

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