RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CDKN2A-AS1Q9UH64 79 aa19.29■□□□□ 0.68
LDB1-204ENST00000490751 C1orf137Q5JT78 98 aa19.28■□□□□ 0.68
LDB1-204ENST00000490751 CKS1BP61024 79 aa19.27■□□□□ 0.68
LDB1-204ENST00000490751 Q8IZM0 81 aa19.27■□□□□ 0.68
LDB1-204ENST00000490751 MRPL18Q9H0U6 180 aaKnown RBP19.27■□□□□ 0.68
LDB1-204ENST00000490751 LINC01546A6NGU7 62 aa19.26■□□□□ 0.67
LDB1-204ENST00000490751 FABP9Q0Z7S8 132 aa19.26■□□□□ 0.67
LDB1-204ENST00000490751 C6orf226Q5I0X4 101 aa19.26■□□□□ 0.67
LDB1-204ENST00000490751 KRTAP7-1Q8IUC3 87 aa19.24■□□□□ 0.67
LDB1-204ENST00000490751 LINC01549A6NIU2 74 aa19.23■□□□□ 0.67
LDB1-204ENST00000490751 C9orf129Q5T035 196 aaKnown RBP19.22■□□□□ 0.67
LDB1-204ENST00000490751 FA2HQ7L5A8 372 aa19.22■□□□□ 0.67
LDB1-204ENST00000490751 KRTAP11-1Q8IUC1 163 aa19.22■□□□□ 0.67
LDB1-204ENST00000490751 M0QXV9 152 aa19.21■□□□□ 0.67
LDB1-204ENST00000490751 LINC00469Q8N7U9 141 aa19.21■□□□□ 0.67
LDB1-204ENST00000490751 SMCO4Q9NRQ5 59 aa19.21■□□□□ 0.67
LDB1-204ENST00000490751 KRTAP10-8P60410 259 aa19.19■□□□□ 0.66
LDB1-204ENST00000490751 TINCRA0A1B0GVN0 87 aa19.18■□□□□ 0.66
LDB1-204ENST00000490751 IGLV7-43P04211 117 aa19.17■□□□□ 0.66
LDB1-204ENST00000490751 SMIM1B2RUZ4 78 aa19.16■□□□□ 0.66
LDB1-204ENST00000490751 ODF1Q14990 250 aa19.16■□□□□ 0.66
LDB1-204ENST00000490751 CST9LQ9H4G1 147 aa19.16■□□□□ 0.66
LDB1-204ENST00000490751 F8VRH5 84 aa19.15■□□□□ 0.66
LDB1-204ENST00000490751 UBE2BP63146 152 aa19.15■□□□□ 0.66
LDB1-204ENST00000490751 IGLV5-45A0A087WSX0 123 aa19.14■□□□□ 0.65
LDB1-204ENST00000490751 CXCL5P42830 114 aa19.13■□□□□ 0.65
LDB1-204ENST00000490751 PMVKQ15126 192 aa19.13■□□□□ 0.65
LDB1-204ENST00000490751 PDZD11Q5EBL8 140 aa19.12■□□□□ 0.65
LDB1-204ENST00000490751 TRAPPC1Q9Y5R8 145 aa19.12■□□□□ 0.65
LDB1-204ENST00000490751 APOC3P02656 99 aa19.11■□□□□ 0.65
LDB1-204ENST00000490751 XAGE1AQ9HD64 81 aa19.11■□□□□ 0.65
LDB1-204ENST00000490751 COX7B2Q8TF08 81 aa19.1■□□□□ 0.65
LDB1-204ENST00000490751 DIRC1Q969H9 104 aa19.09■□□□□ 0.65
LDB1-204ENST00000490751 C18orf32Q8TCD1 76 aa19.08■□□□□ 0.64
LDB1-204ENST00000490751 SPINK8P0C7L1 97 aa19.07■□□□□ 0.64
LDB1-204ENST00000490751 URB1-AS1Q96HZ7 61 aa19.07■□□□□ 0.64
LDB1-204ENST00000490751 UBR4Q5T4S7 5183 aa19.07■□□□□ 0.64
LDB1-204ENST00000490751 A0A096LNJ9 63 aa19.06■□□□□ 0.64
LDB1-204ENST00000490751 NDUFA5Q16718 116 aa19.05■□□□□ 0.64
LDB1-204ENST00000490751 SNAPINO95295 136 aa19.04■□□□□ 0.64
LDB1-204ENST00000490751 LINC00614P0C842 121 aa19.04■□□□□ 0.64
LDB1-204ENST00000490751 SVBPQ8N300 66 aa19.04■□□□□ 0.64
LDB1-204ENST00000490751 C22orf24Q9Y442 160 aa19.04■□□□□ 0.64
LDB1-204ENST00000490751 H0Y9J4 135 aa19.03■□□□□ 0.64
LDB1-204ENST00000490751 H3BRM9 83 aa19.01■□□□□ 0.63
LDB1-204ENST00000490751 HBDP02042 147 aa19.01■□□□□ 0.63
LDB1-204ENST00000490751 NDUFA6P56556 154 aa19.01■□□□□ 0.63
LDB1-204ENST00000490751 IGLC3P0DOY3 106 aa19■□□□□ 0.63
LDB1-204ENST00000490751 PMCHL1Q16048 86 aa18.99■□□□□ 0.63
LDB1-204ENST00000490751 LBHQ53QV2 105 aaPredicted RBP18.98■□□□□ 0.63
LDB1-204ENST00000490751 RAB5BP61020 215 aa18.95■□□□□ 0.62
LDB1-204ENST00000490751 PRR26Q8N8Z3 221 aa18.95■□□□□ 0.62
LDB1-204ENST00000490751 TP73-AS1Q9UF72 201 aa18.95■□□□□ 0.62
LDB1-204ENST00000490751 ZNF22P17026 224 aaPredicted RBP18.94■□□□□ 0.62
LDB1-204ENST00000490751 MRPL55Q7Z7F7 128 aaKnown RBP18.94■□□□□ 0.62
LDB1-204ENST00000490751 NUPR1O60356 82 aa18.92■□□□□ 0.62
LDB1-204ENST00000490751 IGLV5-39A0A0G2JS06 123 aa18.91■□□□□ 0.62
LDB1-204ENST00000490751 ATP5LO75964 103 aa18.91■□□□□ 0.62
LDB1-204ENST00000490751 YPEL4Q96NS1 127 aa18.9■□□□□ 0.62
LDB1-204ENST00000490751 KRTAP1-4P0C5Y4 121 aa18.89■□□□□ 0.61
LDB1-204ENST00000490751 ZNF861PO60384 105 aa18.88■□□□□ 0.61
LDB1-204ENST00000490751 BAGE3Q86Y29 109 aa18.88■□□□□ 0.61
LDB1-204ENST00000490751 LRP2P98164 4655 aa18.87■□□□□ 0.61
LDB1-204ENST00000490751 IGLV1-50A0A075B6I6 118 aa18.85■□□□□ 0.61
LDB1-204ENST00000490751 C11orf86A6NJI1 115 aa18.85■□□□□ 0.61
LDB1-204ENST00000490751 LINC00167Q96N53 147 aa18.85■□□□□ 0.61
LDB1-204ENST00000490751 PFN2P35080 140 aa18.83■□□□□ 0.6
LDB1-204ENST00000490751 IGLV5-37A0A075B6J1 123 aa18.82■□□□□ 0.6
LDB1-204ENST00000490751 GAGE10A6NGK3 116 aa18.82■□□□□ 0.6
LDB1-204ENST00000490751 RPL37AP8A6NKH3 93 aa18.82■□□□□ 0.6
LDB1-204ENST00000490751 TMEM170BQ5T4T1 132 aa18.82■□□□□ 0.6
LDB1-204ENST00000490751 BCE1O60756 84 aa18.8■□□□□ 0.6
LDB1-204ENST00000490751 NKAPP1Q8N9T2 125 aa18.8■□□□□ 0.6
LDB1-204ENST00000490751 CHCHD1Q96BP2 118 aaKnown RBP18.8■□□□□ 0.6
LDB1-204ENST00000490751 ERG28Q9UKR5 140 aa18.79■□□□□ 0.6
LDB1-204ENST00000490751 CHTOPQ9Y3Y2 248 aaKnown RBP18.79■□□□□ 0.6
LDB1-204ENST00000490751 CBLN2Q8IUK8 224 aa18.78■□□□□ 0.6
LDB1-204ENST00000490751 ZNF625Q96I27 306 aaPredicted RBP18.77■□□□□ 0.6
LDB1-204ENST00000490751 RPL28P46779 137 aaKnown RBP18.76■□□□□ 0.59
LDB1-204ENST00000490751 SND1-IT1Q9HBX3 110 aa18.75■□□□□ 0.59
LDB1-204ENST00000490751 RPL13AP40429 203 aaKnown RBP18.74■□□□□ 0.59
LDB1-204ENST00000490751 IFI27L1Q96BM0 104 aa18.74■□□□□ 0.59
LDB1-204ENST00000490751 SCO1O75880 301 aa18.73■□□□□ 0.59
LDB1-204ENST00000490751 COX17Q14061 63 aa18.73■□□□□ 0.59
LDB1-204ENST00000490751 TRAV12-1A0A0B4J245 112 aa18.72■□□□□ 0.59
LDB1-204ENST00000490751 SFTA2Q6UW10 78 aa18.72■□□□□ 0.59
LDB1-204ENST00000490751 VPREB1P12018 145 aa18.69■□□□□ 0.58
LDB1-204ENST00000490751 IGKV2-28A0A075B6P5 120 aa18.68■□□□□ 0.58
LDB1-204ENST00000490751 TMEM223A0PJW6 202 aa18.68■□□□□ 0.58
LDB1-204ENST00000490751 HSBP1O75506 76 aa18.68■□□□□ 0.58
LDB1-204ENST00000490751 IGKV2D-28P01615 120 aa18.68■□□□□ 0.58
LDB1-204ENST00000490751 FAM19A2Q8N3H0 131 aa18.67■□□□□ 0.58
LDB1-204ENST00000490751 TRGC2P03986 189 aa18.65■□□□□ 0.58
LDB1-204ENST00000490751 UBE2AP49459 152 aa18.64■□□□□ 0.57
LDB1-204ENST00000490751 RPL24P83731 157 aaKnown RBP18.64■□□□□ 0.57
LDB1-204ENST00000490751 KRTAP13-1Q8IUC0 172 aa18.63■□□□□ 0.57
LDB1-204ENST00000490751 Q8NDZ9 215 aa18.62■□□□□ 0.57
LDB1-204ENST00000490751 LINC00158P58513 81 aa18.61■□□□□ 0.57
LDB1-204ENST00000490751 A0A087X002 238 aa18.59■□□□□ 0.57
LDB1-204ENST00000490751 A0A0U1RRA0 63 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms