RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 C6orf201Q7Z4U5 140 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 AGPAT4-IT1Q9H0P7 198 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 V9GYH0 126 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 RYR3Q15413 4870 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 KMT2CQ8NEZ4 4911 aaKnown RBP1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 PLECQ15149 4684 aaKnown RBP1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 TNCP24821 2201 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 HUWE1Q7Z6Z7 4374 aaKnown RBP1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 TRAV12-2A0A075B6T6 113 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 TMEM218A2RU14 115 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 IFITM5A6NNB3 132 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 CYB5AP00167 134 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 CKS2P33552 79 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 EDDM3BP56851 147 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 ARHGAP5-AS1Q96IT6 56 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 Q9BRP9 147 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 SNHG12Q9BXW3 62 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 ABRACLQ9P1F3 81 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 NOP16Q9Y3C1 178 aaKnown RBP1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 MUC4Q99102 2169 aa1.67□□□□□ -2.14
DEPDC1-204ENST00000489862 STARD9Q9P2P6 4700 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 C3orf85A0A1B0GTC6 90 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 C2orf70A6NJV1 201 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 M0R1W7 72 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 M0R2P5 195 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 PSCAO43653 123 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 IL7P13232 177 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 GNG2P59768 71 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 TMEM258P61165 79 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 ERHP84090 104 aaKnown RBP1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 HSD52Q0P140 79 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 HMGN3Q15651 99 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 HEPN1Q6WQI6 88 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 Q8N6K4 173 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 S100A16Q96FQ6 103 aaKnown RBP1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 HILPDAQ9Y5L2 63 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 LINC00312Q9Y6C7 94 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 LY96Q9Y6Y9 160 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 RYR2Q92736 4967 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 NBEAL2Q6ZNJ1 2754 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 HYDINQ4G0P3 5121 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 CSMD3Q7Z407 3707 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 TRAV30A0A087WSZ9 112 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 IGHV1-24A0A0C4DH33 117 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 H3BUX3 64 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 M0R143 59 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 LYRM1O43325 122 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 SAA1P0DJI8 122 aaPredicted RBP1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 S100A10P60903 97 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 MPV17LQ2QL34 196 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 RPL39P5Q59GN2 51 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 KCNRGQ8N5I3 272 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 SMIM4Q8WVI0 70 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 TIMM21Q9BVV7 248 aa1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 NHP2Q9NX24 153 aaKnown RBP1.66□□□□□ -2.14
DEPDC1-204ENST00000489862 DYNC2H1Q8NCM8 4307 aaKnown RBP1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 TENM3Q9P273 2699 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 TRBV6-7A0A0A0MS04 114 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 TMEM30CPA0ZSE6 113 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 NAP1L6A6NFF2 107 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 MCRIP1C9JLW8 97 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 E7EUB6 86 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 RBP4P02753 201 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 MIFP14174 115 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 ZNF137PP52743 207 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 TPPP2P59282 170 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 PKIAP61925 76 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 SSBP1Q04837 148 aaKnown RBP1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 TOMM5Q8N4H5 51 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 C5orf17Q8NAS9 161 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 DSCR8Q96T75 97 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 LINC00467Q9BRT7 94 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 PSORS1C2Q9UIG4 136 aa1.65□□□□□ -2.15
DEPDC1-204ENST00000489862 SACSQ9NZJ4 4579 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 C17orf112F2Z3M2 114 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 YPEL1O60688 119 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 TRAPPC2P0DI81 140 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 TRAPPC2BP0DI82 140 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 SAA2P0DJI9 122 aaPredicted RBP1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 FAUP35544 74 aaKnown RBP1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 MINOS1Q5TGZ0 78 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 KRTAP26-1Q6PEX3 210 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 FOXI2Q6ZQN5 318 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 ZNF833PQ6ZTB9 187 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 TSKUQ8WUA8 353 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 LYSTQ99698 3801 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 C14orf132Q9NPU4 83 aa1.64□□□□□ -2.15
DEPDC1-204ENST00000489862 IGLV4-60A0A075B6I1 120 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 CLPSL1A2RUU4 121 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 G3V318 75 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 NDUFB6O95139 128 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 IFNA17P01571 189 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 SPINK8P0C7L1 97 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 KRTAP10-10P60014 251 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 MRPL54Q6P161 138 aaKnown RBP1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 ATP11AUNQ6ZP68 121 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms