RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 IGKV2D-28P01615 120 aa10.91□□□□□ -0.66
BRD9-208ENST00000489816 CCL18P55774 89 aa10.91□□□□□ -0.66
BRD9-208ENST00000489816 CRPP02741 224 aa10.91□□□□□ -0.66
BRD9-208ENST00000489816 HERV-K104P63124 156 aa10.91□□□□□ -0.66
BRD9-208ENST00000489816 FAM19A3Q7Z5A8 133 aa10.9□□□□□ -0.66
BRD9-208ENST00000489816 FAM110AQ9BQ89 295 aa10.9□□□□□ -0.66
BRD9-208ENST00000489816 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
BRD9-208ENST00000489816 BAALC-AS2P0C853 105 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 SHISA2Q6UWI4 295 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 RNF183Q96D59 192 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 CELA1Q9UNI1 258 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 H3BT86 120 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 ANGP03950 147 aaKnown RBP10.89□□□□□ -0.67
BRD9-208ENST00000489816 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
BRD9-208ENST00000489816 A0A087WZ39 114 aa10.88□□□□□ -0.67
BRD9-208ENST00000489816 GAGE2BQ13066 116 aa10.88□□□□□ -0.67
BRD9-208ENST00000489816 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
BRD9-208ENST00000489816 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
BRD9-208ENST00000489816 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
BRD9-208ENST00000489816 SLPIP03973 132 aa10.87□□□□□ -0.67
BRD9-208ENST00000489816 IGHV4-28A0A0C4DH34 117 aa10.87□□□□□ -0.67
BRD9-208ENST00000489816 A0A087WYN8 130 aa10.86□□□□□ -0.67
BRD9-208ENST00000489816 ANAPC13Q9BS18 74 aa10.86□□□□□ -0.67
BRD9-208ENST00000489816 TENM3Q9P273 2699 aa10.86□□□□□ -0.67
BRD9-208ENST00000489816 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
BRD9-208ENST00000489816 SS18Q15532 418 aa10.85□□□□□ -0.67
BRD9-208ENST00000489816 DAD1P61803 113 aa10.85□□□□□ -0.67
BRD9-208ENST00000489816 C9orf129Q5T035 196 aaKnown RBP10.85□□□□□ -0.67
BRD9-208ENST00000489816 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
BRD9-208ENST00000489816 M0QXV9 152 aa10.83□□□□□ -0.68
BRD9-208ENST00000489816 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.68
BRD9-208ENST00000489816 CITED1Q99966 193 aa10.83□□□□□ -0.68
BRD9-208ENST00000489816 LECT2O14960 151 aa10.81□□□□□ -0.68
BRD9-208ENST00000489816 C9orf66Q5T8R8 295 aa10.81□□□□□ -0.68
BRD9-208ENST00000489816 MALP21145 153 aa10.81□□□□□ -0.68
BRD9-208ENST00000489816 CHCHD10Q8WYQ3 142 aaPredicted RBP10.81□□□□□ -0.68
BRD9-208ENST00000489816 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
BRD9-208ENST00000489816 DNAL4O96015 105 aa10.8□□□□□ -0.68
BRD9-208ENST00000489816 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
BRD9-208ENST00000489816 IBA57-AS1B1ANH7 110 aa10.8□□□□□ -0.68
BRD9-208ENST00000489816 REG3AQ06141 175 aa10.8□□□□□ -0.68
BRD9-208ENST00000489816 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
BRD9-208ENST00000489816 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
BRD9-208ENST00000489816 OXLD1Q5BKU9 147 aa10.79□□□□□ -0.68
BRD9-208ENST00000489816 NBEAL1Q6ZS30 2694 aa10.79□□□□□ -0.68
BRD9-208ENST00000489816 RPL28P46779 137 aaKnown RBP10.78□□□□□ -0.68
BRD9-208ENST00000489816 RETNQ9HD89 108 aa10.78□□□□□ -0.68
BRD9-208ENST00000489816 KLK12Q9UKR0 248 aa10.78□□□□□ -0.68
BRD9-208ENST00000489816 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
BRD9-208ENST00000489816 SMCR5Q8TEV8 140 aa10.77□□□□□ -0.68
BRD9-208ENST00000489816 C14orf132Q9NPU4 83 aa10.77□□□□□ -0.68
BRD9-208ENST00000489816 NHLRC4P0CG21 123 aaPredicted RBP10.77□□□□□ -0.69
BRD9-208ENST00000489816 IGHV4-30-4P0DP06 118 aa10.77□□□□□ -0.69
BRD9-208ENST00000489816 TRACP01848 142 aa10.76□□□□□ -0.69
BRD9-208ENST00000489816 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
BRD9-208ENST00000489816 C10orf25Q5T742 122 aa10.76□□□□□ -0.69
BRD9-208ENST00000489816 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
BRD9-208ENST00000489816 A0A1B0GUV1 79 aa10.76□□□□□ -0.69
BRD9-208ENST00000489816 NCR3O14931 201 aa10.75□□□□□ -0.69
BRD9-208ENST00000489816 C3orf56Q8N813 242 aa10.75□□□□□ -0.69
BRD9-208ENST00000489816 SMIM9A6NGZ8 99 aa10.75□□□□□ -0.69
BRD9-208ENST00000489816 LYRM9A8MSI8 78 aa10.75□□□□□ -0.69
BRD9-208ENST00000489816 B5MCH6 92 aa10.75□□□□□ -0.69
BRD9-208ENST00000489816 APOC4P55056 127 aa10.75□□□□□ -0.69
BRD9-208ENST00000489816 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
BRD9-208ENST00000489816 Q8NDZ9 215 aa10.74□□□□□ -0.69
BRD9-208ENST00000489816 LINC01600Q96MT4 127 aa10.74□□□□□ -0.69
BRD9-208ENST00000489816 Q8NAQ8 132 aa10.74□□□□□ -0.69
BRD9-208ENST00000489816 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
BRD9-208ENST00000489816 KIAA0087Q14695 138 aa10.73□□□□□ -0.69
BRD9-208ENST00000489816 CD164L2Q6UWJ8 174 aa10.73□□□□□ -0.69
BRD9-208ENST00000489816 Q8IZM0 81 aa10.73□□□□□ -0.69
BRD9-208ENST00000489816 SPART-AS1P0CW21 52 aa10.71□□□□□ -0.69
BRD9-208ENST00000489816 DEFB121Q5J5C9 76 aa10.7□□□□□ -0.7
BRD9-208ENST00000489816 XAGE1AQ9HD64 81 aa10.69□□□□□ -0.7
BRD9-208ENST00000489816 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
BRD9-208ENST00000489816 ANK2Q01484 3957 aa10.69□□□□□ -0.7
BRD9-208ENST00000489816 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
BRD9-208ENST00000489816 SPAG11BQ08648 103 aa10.68□□□□□ -0.7
BRD9-208ENST00000489816 FAM236AA0A1B0GUQ0 79 aa10.67□□□□□ -0.7
BRD9-208ENST00000489816 FAM236BA0A1B0GV22 79 aa10.67□□□□□ -0.7
BRD9-208ENST00000489816 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
BRD9-208ENST00000489816 CYSRT1A8MQ03 144 aa10.67□□□□□ -0.7
BRD9-208ENST00000489816 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
BRD9-208ENST00000489816 C6orf99Q4VX62 202 aa10.67□□□□□ -0.7
BRD9-208ENST00000489816 FAM240AA0A1B0GVK7 77 aa10.66□□□□□ -0.7
BRD9-208ENST00000489816 IGKV3D-7A0A0C4DH55 119 aa10.66□□□□□ -0.7
BRD9-208ENST00000489816 H0YGX0 51 aa10.66□□□□□ -0.7
BRD9-208ENST00000489816 S100A7L2Q5SY68 101 aa10.66□□□□□ -0.7
BRD9-208ENST00000489816 MIFP14174 115 aa10.65□□□□□ -0.7
BRD9-208ENST00000489816 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
BRD9-208ENST00000489816 RPL18AQ02543 176 aaKnown RBP10.65□□□□□ -0.7
BRD9-208ENST00000489816 BAHCC1Q9P281 2608 aa10.65□□□□□ -0.71
BRD9-208ENST00000489816 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
BRD9-208ENST00000489816 MGAM2Q2M2H8 2515 aa10.64□□□□□ -0.71
BRD9-208ENST00000489816 ENHOQ6UWT2 76 aa10.64□□□□□ -0.71
BRD9-208ENST00000489816 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
BRD9-208ENST00000489816 INAFM2P0DMQ5 153 aa10.63□□□□□ -0.71
BRD9-208ENST00000489816 Q6ZTC4 211 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms