RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 Q6ZUT4 128 aa3.83□□□□□ -1.8
PRPF40A-210ENST00000489741 OR10D4PQ8NGN7 298 aa3.83□□□□□ -1.8
PRPF40A-210ENST00000489741 BORCS7Q96B45 105 aa3.83□□□□□ -1.8
PRPF40A-210ENST00000489741 SMIM7Q9BQ49 75 aa3.83□□□□□ -1.8
PRPF40A-210ENST00000489741 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
PRPF40A-210ENST00000489741 LINC00862A6NCI5 91 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 PPP1R2P9O14990 202 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 MT-ND6P03923 174 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 SRP19P09132 144 aaKnown RBP3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 KRTAP1-4P0C5Y4 121 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 FCER1GP30273 86 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 SMAGPQ0VAQ4 97 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 RIGQ13278 110 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 C20orf78Q9BR46 151 aa3.82□□□□□ -1.8
PRPF40A-210ENST00000489741 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 SMIM27A0A1W2PRY6 76 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 ZNF727A8MUV8 499 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 H0Y9J4 135 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 CEBPGP53567 150 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 MRPS36P82909 103 aaKnown RBP3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 RPL18AQ02543 176 aaKnown RBP3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 SPAG11BQ08648 103 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 TMEM241Q24JQ0 296 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 FAM74A3Q4VXF1 159 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 DIRC1Q969H9 104 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 IMMP2LQ96T52 175 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 EIF5A2Q9GZV4 153 aaKnown RBP3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 NAT8BQ9UHF3 227 aa3.81□□□□□ -1.8
PRPF40A-210ENST00000489741 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 C9JQL5 133 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 TCAPO15273 167 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 VPREB1P12018 145 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 RPL23P62829 140 aaKnown RBP3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 S100A12P80511 92 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 PNRC1Q12796 327 aaPredicted RBP3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 SPANXA1Q9NS26 97 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 C6orf48Q9UBA6 75 aa3.8□□□□□ -1.8
PRPF40A-210ENST00000489741 IGLV1-50A0A075B6I6 118 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 A0A087WZ39 114 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 A0A1B0GW15 77 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 A0A1B0GXF2 115 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 NDUFA1O15239 70 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 ORAOV1Q8WV07 137 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 SMIM2Q9BVW6 85 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 SMDT1Q9H4I9 107 aa3.79□□□□□ -1.8
PRPF40A-210ENST00000489741 NPYP01303 97 aa3.78□□□□□ -1.8
PRPF40A-210ENST00000489741 CKS2P33552 79 aa3.78□□□□□ -1.8
PRPF40A-210ENST00000489741 DSCR10P59022 87 aa3.78□□□□□ -1.8
PRPF40A-210ENST00000489741 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
PRPF40A-210ENST00000489741 AKAP14Q86UN6 197 aa3.78□□□□□ -1.8
PRPF40A-210ENST00000489741 LINC01561Q8N1V8 128 aa3.78□□□□□ -1.8
PRPF40A-210ENST00000489741 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 TRBV30A0A0K0K1B3 111 aa3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 D6R8Y8 96 aa3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 PPBPP02775 128 aa3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 HBBP68871 147 aa3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 NAT8Q9UHE5 227 aa3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 CARHSP1Q9Y2V2 147 aaKnown RBP3.77□□□□□ -1.81
PRPF40A-210ENST00000489741 NDUFC2-KCTD14E9PQ53 114 aa3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 M0QXV9 152 aa3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 ZNF861PO60384 105 aa3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 UBE2D1P51668 147 aa3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 ADIRFQ15847 76 aa3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 C2orf82Q6UX34 121 aa3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 FAM19A5Q7Z5A7 132 aaPredicted RBP3.76□□□□□ -1.81
PRPF40A-210ENST00000489741 TGIF2-C20orf24A0A0A6YYL0 155 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 F8W036 122 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 S100A8P05109 93 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 RPL13AP40429 203 aaKnown RBP3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 MRPL54Q6P161 138 aaKnown RBP3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 TMEM136Q6ZRR5 245 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 LINC00173Q6ZV60 143 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 FAM19A3Q7Z5A8 133 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 AMELXQ99217 191 aa3.75□□□□□ -1.81
PRPF40A-210ENST00000489741 IGIPA6NJ69 53 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 RAB5AP20339 215 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 IFI27P40305 119 aaPredicted RBP3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 PEA15Q15121 130 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 C2orf66Q6UXQ4 117 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 ATP5L2Q7Z4Y8 100 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 ORMDL3Q8N138 153 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 TMEM141Q96I45 108 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 PRELID3AQ96N28 172 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
PRPF40A-210ENST00000489741 NUPR1O60356 82 aa3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 UBE2BP63146 152 aa3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 IFITM2Q01629 132 aa3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 PRR4Q16378 134 aa3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 Q6ZN92 141 aa3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 PACRGQ96M98 296 aaPredicted RBP3.73□□□□□ -1.81
PRPF40A-210ENST00000489741 TP73-AS1Q9UF72 201 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms