RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SMCO4Q9NRQ5 59 aa10.96□□□□□ -0.65
ITGB1-215ENST00000488494 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.65
ITGB1-215ENST00000488494 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
ITGB1-215ENST00000488494 APOC3P02656 99 aa10.95□□□□□ -0.66
ITGB1-215ENST00000488494 Q8IZM0 81 aa10.95□□□□□ -0.66
ITGB1-215ENST00000488494 LINC00469Q8N7U9 141 aa10.95□□□□□ -0.66
ITGB1-215ENST00000488494 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
ITGB1-215ENST00000488494 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
ITGB1-215ENST00000488494 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
ITGB1-215ENST00000488494 M0QXV9 152 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.66
ITGB1-215ENST00000488494 C1orf137Q5JT78 98 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 LINC01600Q96MT4 127 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 TRAPPC1Q9Y5R8 145 aa10.92□□□□□ -0.66
ITGB1-215ENST00000488494 TINCRA0A1B0GVN0 87 aa10.91□□□□□ -0.66
ITGB1-215ENST00000488494 SMIM1B2RUZ4 78 aa10.91□□□□□ -0.66
ITGB1-215ENST00000488494 SNAPINO95295 136 aa10.91□□□□□ -0.66
ITGB1-215ENST00000488494 C9orf129Q5T035 196 aaKnown RBP10.91□□□□□ -0.66
ITGB1-215ENST00000488494 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
ITGB1-215ENST00000488494 SVBPQ8N300 66 aa10.91□□□□□ -0.66
ITGB1-215ENST00000488494 TNXBP22105 4242 aa10.9□□□□□ -0.66
ITGB1-215ENST00000488494 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
ITGB1-215ENST00000488494 F8VRH5 84 aa10.9□□□□□ -0.66
ITGB1-215ENST00000488494 PMVKQ15126 192 aa10.9□□□□□ -0.66
ITGB1-215ENST00000488494 KRTAP11-1Q8IUC1 163 aa10.9□□□□□ -0.66
ITGB1-215ENST00000488494 C18orf32Q8TCD1 76 aa10.9□□□□□ -0.66
ITGB1-215ENST00000488494 A0A096LNJ9 63 aa10.88□□□□□ -0.67
ITGB1-215ENST00000488494 CXCL5P42830 114 aa10.88□□□□□ -0.67
ITGB1-215ENST00000488494 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
ITGB1-215ENST00000488494 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
ITGB1-215ENST00000488494 UBE2BP63146 152 aa10.87□□□□□ -0.67
ITGB1-215ENST00000488494 PMCHL1Q16048 86 aa10.87□□□□□ -0.67
ITGB1-215ENST00000488494 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
ITGB1-215ENST00000488494 COX7B2Q8TF08 81 aa10.87□□□□□ -0.67
ITGB1-215ENST00000488494 XAGE1AQ9HD64 81 aa10.86□□□□□ -0.67
ITGB1-215ENST00000488494 HBDP02042 147 aa10.85□□□□□ -0.67
ITGB1-215ENST00000488494 IGLV7-43P04211 117 aa10.84□□□□□ -0.67
ITGB1-215ENST00000488494 LINC00614P0C842 121 aa10.84□□□□□ -0.67
ITGB1-215ENST00000488494 NDUFA6P56556 154 aa10.84□□□□□ -0.67
ITGB1-215ENST00000488494 ODF1Q14990 250 aa10.84□□□□□ -0.67
ITGB1-215ENST00000488494 YPEL4Q96NS1 127 aa10.83□□□□□ -0.68
ITGB1-215ENST00000488494 UBR4Q5T4S7 5183 aa10.82□□□□□ -0.68
ITGB1-215ENST00000488494 H3BRM9 83 aa10.82□□□□□ -0.68
ITGB1-215ENST00000488494 IGLC3P0DOY3 106 aa10.82□□□□□ -0.68
ITGB1-215ENST00000488494 RAB5BP61020 215 aa10.81□□□□□ -0.68
ITGB1-215ENST00000488494 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
ITGB1-215ENST00000488494 KRTAP10-8P60410 259 aa10.8□□□□□ -0.68
ITGB1-215ENST00000488494 ZNF22P17026 224 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-215ENST00000488494 CBLN2Q8IUK8 224 aa10.79□□□□□ -0.68
ITGB1-215ENST00000488494 C22orf24Q9Y442 160 aa10.79□□□□□ -0.68
ITGB1-215ENST00000488494 H0Y9J4 135 aa10.78□□□□□ -0.68
ITGB1-215ENST00000488494 ATP5LO75964 103 aa10.78□□□□□ -0.68
ITGB1-215ENST00000488494 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.69
ITGB1-215ENST00000488494 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
ITGB1-215ENST00000488494 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
ITGB1-215ENST00000488494 BAGE3Q86Y29 109 aa10.76□□□□□ -0.69
ITGB1-215ENST00000488494 MRPL55Q7Z7F7 128 aaKnown RBP10.75□□□□□ -0.69
ITGB1-215ENST00000488494 TP73-AS1Q9UF72 201 aa10.75□□□□□ -0.69
ITGB1-215ENST00000488494 CHCHD1Q96BP2 118 aaKnown RBP10.74□□□□□ -0.69
ITGB1-215ENST00000488494 TMEM170BQ5T4T1 132 aa10.73□□□□□ -0.69
ITGB1-215ENST00000488494 PFN2P35080 140 aa10.72□□□□□ -0.69
ITGB1-215ENST00000488494 NUPR1O60356 82 aa10.71□□□□□ -0.69
ITGB1-215ENST00000488494 PRR26Q8N8Z3 221 aa10.71□□□□□ -0.69
ITGB1-215ENST00000488494 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
ITGB1-215ENST00000488494 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
ITGB1-215ENST00000488494 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
ITGB1-215ENST00000488494 IFI27L1Q96BM0 104 aa10.7□□□□□ -0.7
ITGB1-215ENST00000488494 LRP2P98164 4655 aa10.7□□□□□ -0.7
ITGB1-215ENST00000488494 KRTAP1-4P0C5Y4 121 aa10.69□□□□□ -0.7
ITGB1-215ENST00000488494 NKAPP1Q8N9T2 125 aa10.69□□□□□ -0.7
ITGB1-215ENST00000488494 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
ITGB1-215ENST00000488494 ERG28Q9UKR5 140 aa10.69□□□□□ -0.7
ITGB1-215ENST00000488494 IGLV5-37A0A075B6J1 123 aa10.68□□□□□ -0.7
ITGB1-215ENST00000488494 ZNF861PO60384 105 aa10.68□□□□□ -0.7
ITGB1-215ENST00000488494 HSBP1O75506 76 aa10.68□□□□□ -0.7
ITGB1-215ENST00000488494 SLC7A5P1Q8MH63 180 aa10.68□□□□□ -0.7
ITGB1-215ENST00000488494 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-215ENST00000488494 TRAV12-1A0A0B4J245 112 aa10.67□□□□□ -0.7
ITGB1-215ENST00000488494 BCE1O60756 84 aa10.67□□□□□ -0.7
ITGB1-215ENST00000488494 TRGC2P03986 189 aa10.67□□□□□ -0.7
ITGB1-215ENST00000488494 IGLV1-50A0A075B6I6 118 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 SCO1O75880 301 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 KRTAP3-3Q9BYR6 98 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
ITGB1-215ENST00000488494 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
ITGB1-215ENST00000488494 RPL28P46779 137 aaKnown RBP10.64□□□□□ -0.71
ITGB1-215ENST00000488494 COX17Q14061 63 aa10.64□□□□□ -0.71
ITGB1-215ENST00000488494 IGKV2-28A0A075B6P5 120 aa10.63□□□□□ -0.71
ITGB1-215ENST00000488494 H0Y8G0 127 aa10.63□□□□□ -0.71
ITGB1-215ENST00000488494 IGKV2D-28P01615 120 aa10.63□□□□□ -0.71
ITGB1-215ENST00000488494 SERF1AO75920 110 aa10.62□□□□□ -0.71
ITGB1-215ENST00000488494 VPREB1P12018 145 aa10.62□□□□□ -0.71
ITGB1-215ENST00000488494 LINC00310P59036 64 aa10.62□□□□□ -0.71
ITGB1-215ENST00000488494 RPL13AP40429 203 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms