RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 K7EP13 123 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 CXCL5P42830 114 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 HERV-K104P63124 156 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 SRSF9Q13242 221 aaKnown RBP eCLIP4.61□□□□□ -1.67
PDAP1-203ENST00000488214 C6orf226Q5I0X4 101 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 BVES-AS1Q5T3Y7 98 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 CASC10Q5T4H9 136 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 KRTAP26-1Q6PEX3 210 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 C2orf82Q6UX34 121 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 LINC00526Q96FQ7 95 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 SNHG12Q9BXW3 62 aa4.61□□□□□ -1.67
PDAP1-203ENST00000488214 TENM2Q9NT68 2774 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 ZNF561-AS1K7EIQ3 104 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 NPC2P61916 151 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 TAL2Q16559 108 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 SFTA2Q6UW10 78 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 C6orf223Q8N319 242 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 DAND5Q8N907 189 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 C15orf56Q8N910 161 aa4.6□□□□□ -1.67
PDAP1-203ENST00000488214 SPANXB1Q9NS25 103 aaPredicted RBP4.6□□□□□ -1.67
PDAP1-203ENST00000488214 GVQW2A0A096LPI5 108 aaPredicted RBP4.59□□□□□ -1.67
PDAP1-203ENST00000488214 USP17L23D6RBM5 183 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 C3orf84H3BNL1 204 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 M0R2N4 97 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 LECT2O14960 151 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 PSCAO43653 123 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 TIMM17BO60830 172 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 LY6G6CO95867 125 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 SMIM13P0DJ93 91 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 PFN2P35080 140 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 PTTG1IPP53801 180 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 FXYD2P54710 66 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 CIRBPQ14011 172 aaKnown RBP4.59□□□□□ -1.67
PDAP1-203ENST00000488214 KIAA0087Q14695 138 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 CEND1Q8N111 149 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 LITAFQ99732 161 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 TM2D2Q9BX73 214 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 DNAH6Q9C0G6 4158 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 ERG28Q9UKR5 140 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 COX11Q9Y6N1 276 aa4.59□□□□□ -1.67
PDAP1-203ENST00000488214 DNAH10Q8IVF4 4471 aa4.59□□□□□ -1.68
PDAP1-203ENST00000488214 LINC00158P58513 81 aa4.58□□□□□ -1.68
PDAP1-203ENST00000488214 ADAMTSL4-AS1Q5T5F5 129 aa4.58□□□□□ -1.68
PDAP1-203ENST00000488214 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
PDAP1-203ENST00000488214 CAMK2N2Q96S95 79 aa4.58□□□□□ -1.68
PDAP1-203ENST00000488214 SPANXDQ9BXN6 97 aa4.58□□□□□ -1.68
PDAP1-203ENST00000488214 SPANXCQ9NY87 97 aa4.58□□□□□ -1.68
PDAP1-203ENST00000488214 TMEM238LA0A1B0GVL6 79 aa4.57□□□□□ -1.68
PDAP1-203ENST00000488214 A6NDN8 102 aa4.57□□□□□ -1.68
PDAP1-203ENST00000488214 K7ERJ3 54 aa4.57□□□□□ -1.68
PDAP1-203ENST00000488214 C10orf25Q5T742 122 aa4.57□□□□□ -1.68
PDAP1-203ENST00000488214 UNQ6190/PRO20217Q6UXQ8 127 aa4.57□□□□□ -1.68
PDAP1-203ENST00000488214 MIR7-3HGQ8N6C7 128 aa4.57□□□□□ -1.68
PDAP1-203ENST00000488214 NHP2Q9NX24 153 aaKnown RBP4.57□□□□□ -1.68
PDAP1-203ENST00000488214 SMCPP49901 116 aaPredicted RBP4.56□□□□□ -1.68
PDAP1-203ENST00000488214 RPL24P83731 157 aaKnown RBP4.56□□□□□ -1.68
PDAP1-203ENST00000488214 TNP2Q05952 138 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 WFDC2Q14508 124 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 C9orf116Q5BN46 136 aaPredicted RBP4.56□□□□□ -1.68
PDAP1-203ENST00000488214 COL5A1-AS1Q5SY13 56 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 Q6ZRU5 148 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 Q6ZVH6 145 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 MUSTN1Q8IVN3 82 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 C2orf48Q96LS8 159 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 CARD19Q96LW7 228 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 C6orf48Q9UBA6 75 aa4.56□□□□□ -1.68
PDAP1-203ENST00000488214 TRBV30A0A0K0K1B3 111 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 A4D1N5 150 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 IFITM1P13164 125 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 SYCNQ0VAF6 134 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 SOSTDC1Q6X4U4 206 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 LINC00308Q8TCZ7 52 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 COPS9Q8WXC6 57 aa4.55□□□□□ -1.68
PDAP1-203ENST00000488214 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
PDAP1-203ENST00000488214 EIF4EBP3O60516 100 aaPredicted RBP4.54□□□□□ -1.68
PDAP1-203ENST00000488214 COX17Q14061 63 aa4.54□□□□□ -1.68
PDAP1-203ENST00000488214 LBHQ53QV2 105 aaPredicted RBP4.54□□□□□ -1.68
PDAP1-203ENST00000488214 Q6ZR54 194 aa4.54□□□□□ -1.68
PDAP1-203ENST00000488214 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
PDAP1-203ENST00000488214 RAB37Q96AX2 223 aa4.54□□□□□ -1.68
PDAP1-203ENST00000488214 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.53□□□□□ -1.68
PDAP1-203ENST00000488214 F8WDY8 70 aa4.53□□□□□ -1.68
PDAP1-203ENST00000488214 RPL18AQ02543 176 aaKnown RBP4.53□□□□□ -1.68
PDAP1-203ENST00000488214 C14orf177Q52M58 125 aa4.53□□□□□ -1.68
PDAP1-203ENST00000488214 DNAH2Q9P225 4427 aa4.53□□□□□ -1.68
PDAP1-203ENST00000488214 A0A0B4J2C4 111 aa4.52□□□□□ -1.69
PDAP1-203ENST00000488214 A0A1B0GWB2 263 aa4.52□□□□□ -1.69
PDAP1-203ENST00000488214 H7C2G1 150 aa4.52□□□□□ -1.69
PDAP1-203ENST00000488214 TAX1BP3O14907 124 aa4.52□□□□□ -1.69
PDAP1-203ENST00000488214 C1orf134Q5TEV5 83 aa4.52□□□□□ -1.69
PDAP1-203ENST00000488214 NAA38Q9BRA0 125 aaKnown RBP4.52□□□□□ -1.69
PDAP1-203ENST00000488214 SND1-IT1Q9HBX3 110 aa4.52□□□□□ -1.69
PDAP1-203ENST00000488214 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 SACSQ9NZJ4 4579 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 SLPIP03973 132 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 CFC1BP0CG36 223 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 CFC1P0CG37 223 aa4.51□□□□□ -1.69
PDAP1-203ENST00000488214 RPL13AP40429 203 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms