RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RNF151Q2KHN1 245 aa10.12□□□□□ -0.79
C9orf3-219ENST00000488186 C2orf82Q6UX34 121 aa10.12□□□□□ -0.79
C9orf3-219ENST00000488186 DNAH8Q96JB1 4490 aa10.12□□□□□ -0.79
C9orf3-219ENST00000488186 PLNP26678 52 aa10.11□□□□□ -0.79
C9orf3-219ENST00000488186 S100A2P29034 98 aa10.11□□□□□ -0.79
C9orf3-219ENST00000488186 CXCL5P42830 114 aa10.11□□□□□ -0.79
C9orf3-219ENST00000488186 IGKV2-24A0A0C4DH68 120 aa10.1□□□□□ -0.79
C9orf3-219ENST00000488186 DPM2O94777 84 aa10.1□□□□□ -0.79
C9orf3-219ENST00000488186 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
C9orf3-219ENST00000488186 TRBV30A0A0K0K1B3 111 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 XGP55808 180 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 HAMPP81172 84 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 RPL18AQ02543 176 aaKnown RBP10.09□□□□□ -0.79
C9orf3-219ENST00000488186 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 Q6ZSA8 131 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 PMCHL2Q9BQD1 86 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
C9orf3-219ENST00000488186 SYS1-DBNDD2H3BUS1 97 aa10.08□□□□□ -0.8
C9orf3-219ENST00000488186 IGKCP01834 107 aa10.08□□□□□ -0.8
C9orf3-219ENST00000488186 KRTDAPP60985 99 aa10.08□□□□□ -0.8
C9orf3-219ENST00000488186 C6orf48Q9UBA6 75 aa10.08□□□□□ -0.8
C9orf3-219ENST00000488186 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
C9orf3-219ENST00000488186 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
C9orf3-219ENST00000488186 PET117Q6UWS5 81 aa10.07□□□□□ -0.8
C9orf3-219ENST00000488186 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-219ENST00000488186 A0A096LNI7 61 aa10.06□□□□□ -0.8
C9orf3-219ENST00000488186 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
C9orf3-219ENST00000488186 HERVK_113P61574 105 aa10.06□□□□□ -0.8
C9orf3-219ENST00000488186 C3orf79P0CE67 100 aa10.05□□□□□ -0.8
C9orf3-219ENST00000488186 PTTG1IPP53801 180 aa10.05□□□□□ -0.8
C9orf3-219ENST00000488186 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
C9orf3-219ENST00000488186 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
C9orf3-219ENST00000488186 C20orf202A1L168 122 aa10.04□□□□□ -0.8
C9orf3-219ENST00000488186 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
C9orf3-219ENST00000488186 Q8N1X5 172 aa10.04□□□□□ -0.8
C9orf3-219ENST00000488186 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
C9orf3-219ENST00000488186 SPACA4Q8TDM5 124 aa10.04□□□□□ -0.8
C9orf3-219ENST00000488186 NDUFC2-KCTD14E9PQ53 114 aa10.03□□□□□ -0.8
C9orf3-219ENST00000488186 PANO1I0J062 215 aa10.03□□□□□ -0.8
C9orf3-219ENST00000488186 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-219ENST00000488186 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
C9orf3-219ENST00000488186 GAGE2EQ4V326 116 aa10.03□□□□□ -0.8
C9orf3-219ENST00000488186 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
C9orf3-219ENST00000488186 STPG4Q8N801 248 aa10.03□□□□□ -0.8
C9orf3-219ENST00000488186 GAGE2DQ9UEU5 116 aa10.03□□□□□ -0.8
C9orf3-219ENST00000488186 A0A087WYN8 130 aa10.02□□□□□ -0.81
C9orf3-219ENST00000488186 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.81
C9orf3-219ENST00000488186 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
C9orf3-219ENST00000488186 LINC01545Q5VT33 79 aa10.02□□□□□ -0.81
C9orf3-219ENST00000488186 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
C9orf3-219ENST00000488186 Q6ZRP5 223 aa10.01□□□□□ -0.81
C9orf3-219ENST00000488186 PLEKHB2Q96CS7 222 aa10.01□□□□□ -0.81
C9orf3-219ENST00000488186 HIST1H2BLQ99880 126 aa10□□□□□ -0.81
C9orf3-219ENST00000488186 LEPROTO15243 131 aa9.99□□□□□ -0.81
C9orf3-219ENST00000488186 AKR1D1P51857 326 aa9.99□□□□□ -0.81
C9orf3-219ENST00000488186 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
C9orf3-219ENST00000488186 LGALS3P17931 250 aaKnown RBP9.98□□□□□ -0.81
C9orf3-219ENST00000488186 PFN2P35080 140 aa9.98□□□□□ -0.81
C9orf3-219ENST00000488186 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
C9orf3-219ENST00000488186 C5orf52A6NGY3 159 aa9.97□□□□□ -0.81
C9orf3-219ENST00000488186 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
C9orf3-219ENST00000488186 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
C9orf3-219ENST00000488186 FAT1Q14517 4588 aa9.96□□□□□ -0.81
C9orf3-219ENST00000488186 EPM2AB3EWF7 344 aa9.96□□□□□ -0.82
C9orf3-219ENST00000488186 J3QQQ9 107 aa9.96□□□□□ -0.82
C9orf3-219ENST00000488186 HERV-K104P63124 156 aa9.96□□□□□ -0.82
C9orf3-219ENST00000488186 LINC00528Q8N1L1 170 aa9.96□□□□□ -0.82
C9orf3-219ENST00000488186 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
C9orf3-219ENST00000488186 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
C9orf3-219ENST00000488186 LINC00158P58513 81 aa9.95□□□□□ -0.82
C9orf3-219ENST00000488186 COX17Q14061 63 aa9.95□□□□□ -0.82
C9orf3-219ENST00000488186 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
C9orf3-219ENST00000488186 KRTAP17-1Q9BYP8 105 aa9.95□□□□□ -0.82
C9orf3-219ENST00000488186 LINC00587B1AMM8 73 aa9.94□□□□□ -0.82
C9orf3-219ENST00000488186 E9PLD3 99 aa9.94□□□□□ -0.82
C9orf3-219ENST00000488186 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
C9orf3-219ENST00000488186 A0A1W2PNN7 141 aa9.93□□□□□ -0.82
C9orf3-219ENST00000488186 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
C9orf3-219ENST00000488186 NMUP48645 174 aa9.93□□□□□ -0.82
C9orf3-219ENST00000488186 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-219ENST00000488186 Q5VSD8 79 aa9.93□□□□□ -0.82
C9orf3-219ENST00000488186 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-219ENST00000488186 TMA7Q9Y2S6 64 aaKnown RBP9.93□□□□□ -0.82
C9orf3-219ENST00000488186 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
C9orf3-219ENST00000488186 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
C9orf3-219ENST00000488186 ATOH7Q8N100 152 aa9.92□□□□□ -0.82
C9orf3-219ENST00000488186 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
C9orf3-219ENST00000488186 SCGB1D1O95968 90 aa9.91□□□□□ -0.82
C9orf3-219ENST00000488186 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
C9orf3-219ENST00000488186 SMIM13P0DJ93 91 aa9.9□□□□□ -0.82
C9orf3-219ENST00000488186 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.82
C9orf3-219ENST00000488186 HSBP1L1C9JCN9 74 aa9.89□□□□□ -0.83
C9orf3-219ENST00000488186 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
C9orf3-219ENST00000488186 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
C9orf3-219ENST00000488186 M0QXV9 152 aa9.87□□□□□ -0.83
C9orf3-219ENST00000488186 PHF5AQ7RTV0 110 aaKnown RBP9.87□□□□□ -0.83
C9orf3-219ENST00000488186 SND1-IT1Q9HBX3 110 aa9.87□□□□□ -0.83
C9orf3-219ENST00000488186 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
C9orf3-219ENST00000488186 PCLOQ9Y6V0 5065 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms