RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 NDUFC2-KCTD14E9PQ53 114 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 H2BFSP57053 126 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 GNG5P63218 68 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 HBBP68871 147 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 COX17Q14061 63 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 Q5XG85 94 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 ATP5L2Q7Z4Y8 100 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 PPDPFQ9H3Y8 114 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 ST20Q9HBF5 79 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 OSTCQ9NRP0 149 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC00846Q9NV44 126 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 GRIFINA4D1Z8 144 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC00483Q53H64 154 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 KRTAP7-1Q8IUC3 87 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 OR10AG1Q8NH19 301 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 LYPD6BQ8NI32 183 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 BATF3Q9NR55 127 aa1.59□□□□□ -2.15
DEPDC1-203ENST00000488146 IGLV4-60A0A075B6I1 120 aa1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 NDUFAF8A1L188 74 aa1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 SPINK1P00995 79 aa1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 NKX2-5P52952 324 aaPredicted RBP1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 Q5BKY6 102 aa1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 PDZD11Q5EBL8 140 aa1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 UBE2D4Q9Y2X8 147 aa1.59□□□□□ -2.16
DEPDC1-203ENST00000488146 TRAV9-1A0A075B6T8 112 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 IGHV3OR16-9A0A0B4J2B5 98 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 COX6A2Q02221 97 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 CD164Q04900 197 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 SPAG11BQ08648 103 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 ZC2HC1BQ5TFG8 222 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 SSBP3-AS1Q7Z2R9 100 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 OR2T35Q8NGX2 323 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 TYMSOSQ8TAI1 123 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 CAMK2N2Q96S95 79 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 KIR2DL4Q99706 377 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 TGIF2-C20orf24A0A0A6YYL0 155 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 A0A1B0GWB2 263 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 F8W036 122 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 SSNA1O43805 119 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 PMCHP20382 165 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 GNG4P50150 75 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 LINC00304Q8N9R0 145 aa1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 OPRPNQ99935 248 aaPredicted RBP1.58□□□□□ -2.16
DEPDC1-203ENST00000488146 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 LECT2O14960 151 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 RPL35P42766 123 aaKnown RBP1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 KIAA0087Q14695 138 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 COX19Q49B96 90 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 FAM74A4Q5TZK3 123 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 LYZL1Q6UWQ5 148 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 ALKAL2Q6UX46 152 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 TMEM141Q96I45 108 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 AMELXQ99217 191 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 TIMM17AQ99595 171 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 C2orf88Q9BSF0 95 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 UBR4Q5T4S7 5183 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 LOC107984156A0A0G2JMH3 177 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 A0A1B0GUT8 65 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 KRTAP16-1A8MUX0 517 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 LINC00587B1AMM8 73 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 SLC25A20O43772 301 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 UBE2G2P60604 165 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 HERVK_113P63121 156 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 KRTAP13-3Q3SY46 172 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 CENPWQ5EE01 88 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 KRTAP5-5Q701N2 237 aaPredicted RBP1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 TMUB2Q71RG4 321 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 ARL17AQ8IVW1 177 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 LINC00337Q8N6G1 96 aa1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 CHTOPQ9Y3Y2 248 aaKnown RBP1.57□□□□□ -2.16
DEPDC1-203ENST00000488146 IGHV3-73A0A0B4J1V6 119 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 M0QXV9 152 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 LINC00173Q6ZV60 143 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 CEND1Q8N111 149 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 MED9Q9NWA0 146 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 Q9UF83 564 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 KANTRA0A1W2PQU2 76 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 SMLR1H3BR10 107 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 GATCO43716 136 aaKnown RBP1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 ORMDL2Q53FV1 153 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 RPL7L1Q6DKI1 246 aaKnown RBP1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 TCTE3Q8IZS6 198 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 ALG5Q9Y673 324 aa1.56□□□□□ -2.16
DEPDC1-203ENST00000488146 A0A0J9YXY3 114 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SMIM27A0A1W2PRY6 76 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 ZNF727A8MUV8 499 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 F8VRH5 84 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 MGPP08493 103 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 RAB4AP20338 218 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SPRR1AP35321 89 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 LCE1AQ5T7P2 110 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 MRPL55Q7Z7F7 128 aaKnown RBP1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SLC51BQ86UW2 128 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 ORAOV1Q8WV07 137 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms