RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 TOMM6Q96B49 74 aa13□□□□□ -0.33
RPL35-203ENST00000487431 LPAP08519 4548 aa13□□□□□ -0.33
RPL35-203ENST00000487431 PAPPA-AS1Q5QFB9 102 aa12.99□□□□□ -0.33
RPL35-203ENST00000487431 Q6ZN92 141 aa12.99□□□□□ -0.33
RPL35-203ENST00000487431 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
RPL35-203ENST00000487431 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
RPL35-203ENST00000487431 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
RPL35-203ENST00000487431 BAGE3Q86Y29 109 aa12.98□□□□□ -0.33
RPL35-203ENST00000487431 TMEM141Q96I45 108 aa12.98□□□□□ -0.33
RPL35-203ENST00000487431 IGLV4-3A0A075B6K6 122 aa12.97□□□□□ -0.33
RPL35-203ENST00000487431 H0Y9J4 135 aa12.97□□□□□ -0.33
RPL35-203ENST00000487431 TIMM17AQ99595 171 aa12.97□□□□□ -0.33
RPL35-203ENST00000487431 IGIPA6NJ69 53 aa12.96□□□□□ -0.33
RPL35-203ENST00000487431 ERASQ7Z444 233 aa12.96□□□□□ -0.33
RPL35-203ENST00000487431 SCGB3A1Q96QR1 104 aa12.96□□□□□ -0.33
RPL35-203ENST00000487431 C2orf88Q9BSF0 95 aa12.96□□□□□ -0.33
RPL35-203ENST00000487431 TRBV30A0A0K0K1B3 111 aa12.95□□□□□ -0.34
RPL35-203ENST00000487431 HBDP02042 147 aa12.95□□□□□ -0.34
RPL35-203ENST00000487431 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
RPL35-203ENST00000487431 FAM19A5Q7Z5A7 132 aaPredicted RBP12.95□□□□□ -0.34
RPL35-203ENST00000487431 PRR26Q8N8Z3 221 aa12.95□□□□□ -0.34
RPL35-203ENST00000487431 URB1-AS1Q96HZ7 61 aa12.95□□□□□ -0.34
RPL35-203ENST00000487431 GAGE2EQ4V326 116 aa12.94□□□□□ -0.34
RPL35-203ENST00000487431 LINC01561Q8N1V8 128 aa12.94□□□□□ -0.34
RPL35-203ENST00000487431 VCX2Q9H322 139 aa12.94□□□□□ -0.34
RPL35-203ENST00000487431 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
RPL35-203ENST00000487431 HSBP1O75506 76 aa12.93□□□□□ -0.34
RPL35-203ENST00000487431 NDUFC2-KCTD14E9PQ53 114 aa12.92□□□□□ -0.34
RPL35-203ENST00000487431 KRTAP1-4P0C5Y4 121 aa12.92□□□□□ -0.34
RPL35-203ENST00000487431 UBE2D1P51668 147 aa12.92□□□□□ -0.34
RPL35-203ENST00000487431 IGLV1-50A0A075B6I6 118 aa12.91□□□□□ -0.34
RPL35-203ENST00000487431 M0QXV9 152 aa12.91□□□□□ -0.34
RPL35-203ENST00000487431 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
RPL35-203ENST00000487431 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.34
RPL35-203ENST00000487431 AMELXQ99217 191 aa12.9□□□□□ -0.34
RPL35-203ENST00000487431 ATP5LO75964 103 aa12.89□□□□□ -0.35
RPL35-203ENST00000487431 LINC00173Q6ZV60 143 aa12.89□□□□□ -0.35
RPL35-203ENST00000487431 A0A096LNJ9 63 aa12.88□□□□□ -0.35
RPL35-203ENST00000487431 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 SERF1AO75920 110 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 SEC11AP67812 179 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
RPL35-203ENST00000487431 FAM19A3Q7Z5A8 133 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 PACRGQ96M98 296 aaPredicted RBP12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
RPL35-203ENST00000487431 UBE2BP63146 152 aa12.86□□□□□ -0.35
RPL35-203ENST00000487431 PMVKQ15126 192 aa12.84□□□□□ -0.35
RPL35-203ENST00000487431 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
RPL35-203ENST00000487431 Q8IZM0 81 aa12.83□□□□□ -0.36
RPL35-203ENST00000487431 LINC00310P59036 64 aa12.82□□□□□ -0.36
RPL35-203ENST00000487431 PRSS2P07478 247 aa12.81□□□□□ -0.36
RPL35-203ENST00000487431 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
RPL35-203ENST00000487431 HERVK_113P63121 156 aa12.81□□□□□ -0.36
RPL35-203ENST00000487431 FAM19A2Q8N3H0 131 aa12.81□□□□□ -0.36
RPL35-203ENST00000487431 CST9LQ9H4G1 147 aa12.81□□□□□ -0.36
RPL35-203ENST00000487431 LEPROTL1O95214 131 aa12.8□□□□□ -0.36
RPL35-203ENST00000487431 NDUFA6P56556 154 aa12.8□□□□□ -0.36
RPL35-203ENST00000487431 CKS1BP61024 79 aa12.8□□□□□ -0.36
RPL35-203ENST00000487431 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
RPL35-203ENST00000487431 GEMIN7Q9H840 131 aaKnown RBP12.8□□□□□ -0.36
RPL35-203ENST00000487431 HSPB8Q9UJY1 196 aa12.79□□□□□ -0.36
RPL35-203ENST00000487431 NUPR1O60356 82 aa12.78□□□□□ -0.36
RPL35-203ENST00000487431 ZNF861PO60384 105 aa12.78□□□□□ -0.36
RPL35-203ENST00000487431 C6orf226Q5I0X4 101 aa12.78□□□□□ -0.36
RPL35-203ENST00000487431 TOMM7Q9P0U1 55 aa12.78□□□□□ -0.36
RPL35-203ENST00000487431 TINCRA0A1B0GVN0 87 aa12.77□□□□□ -0.37
RPL35-203ENST00000487431 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
RPL35-203ENST00000487431 C22orf24Q9Y442 160 aa12.77□□□□□ -0.37
RPL35-203ENST00000487431 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
RPL35-203ENST00000487431 CDKN2A-AS1Q9UH64 79 aa12.76□□□□□ -0.37
RPL35-203ENST00000487431 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
RPL35-203ENST00000487431 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
RPL35-203ENST00000487431 F8VRH5 84 aa12.74□□□□□ -0.37
RPL35-203ENST00000487431 LBHQ53QV2 105 aaPredicted RBP12.74□□□□□ -0.37
RPL35-203ENST00000487431 XAGE1AQ9HD64 81 aa12.74□□□□□ -0.37
RPL35-203ENST00000487431 FABP4P15090 132 aa12.73□□□□□ -0.37
RPL35-203ENST00000487431 IGLC3P0DOY3 106 aa12.72□□□□□ -0.37
RPL35-203ENST00000487431 IGLV5-45A0A087WSX0 123 aa12.71□□□□□ -0.37
RPL35-203ENST00000487431 H3BRM9 83 aa12.71□□□□□ -0.37
RPL35-203ENST00000487431 CXCL5P42830 114 aa12.71□□□□□ -0.37
RPL35-203ENST00000487431 CHTOPQ9Y3Y2 248 aaKnown RBP12.71□□□□□ -0.37
RPL35-203ENST00000487431 MRPL55Q7Z7F7 128 aaKnown RBP12.7□□□□□ -0.38
RPL35-203ENST00000487431 MAP1LC3CQ9BXW4 147 aa12.7□□□□□ -0.38
RPL35-203ENST00000487431 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
RPL35-203ENST00000487431 S100A6P06703 90 aa12.68□□□□□ -0.38
RPL35-203ENST00000487431 PRR4Q16378 134 aa12.68□□□□□ -0.38
RPL35-203ENST00000487431 H0Y8G0 127 aa12.67□□□□□ -0.38
RPL35-203ENST00000487431 BCE1O60756 84 aa12.67□□□□□ -0.38
RPL35-203ENST00000487431 MUC2Q02817 5179 aa12.66□□□□□ -0.38
RPL35-203ENST00000487431 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms