RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 SMDT1Q9H4I9 107 aa2.98□□□□□ -1.93
R3HDM1-218ENST00000487294 MED9Q9NWA0 146 aa2.98□□□□□ -1.93
R3HDM1-218ENST00000487294 TMEM242Q9NWH2 141 aa2.98□□□□□ -1.93
R3HDM1-218ENST00000487294 KANTRA0A1W2PQU2 76 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 NDUFA1O15239 70 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 RAB4AP20338 218 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 RPL32P62910 135 aaKnown RBP2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 KIAA0087Q14695 138 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 TPRXLQ17RH7 258 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 C5orf38Q86SI9 138 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 C6orf48Q9UBA6 75 aa2.97□□□□□ -1.93
R3HDM1-218ENST00000487294 TRBV24-1A0A075B6N3 115 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 TRAV13-1A0A0B4J241 112 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 TRBV30A0A0K0K1B3 111 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 A0A1B0GUT8 65 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 NDUFC2-KCTD14E9PQ53 114 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 M0QXV9 152 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 TCAPO15273 167 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 NUPR1O60356 82 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 MRPS36P82909 103 aaKnown RBP2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 Q6ZUT4 128 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 ORAOV1Q8WV07 137 aa2.96□□□□□ -1.94
R3HDM1-218ENST00000487294 TMEM250H0YL14 139 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 PPP1R2P9O14990 202 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 GATCO43716 136 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 FCER1GP30273 86 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 C9orf129Q5T035 196 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 UNQ6190/PRO20217Q6UXQ8 127 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 FAM19A5Q7Z5A7 132 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 LINC01561Q8N1V8 128 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 Q8N377 158 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 Q8NBF4 154 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 KIR2DL4Q99706 377 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 C20orf78Q9BR46 151 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 SPANXA1Q9NS26 97 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
R3HDM1-218ENST00000487294 LINC00862A6NCI5 91 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 HIGD1CA8MV81 97 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 SMLR1H3BR10 107 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 CRYGAP11844 174 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 UBE2BP63146 152 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 RNASE13Q5GAN3 156 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 LINC00242Q5T6M2 205 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 AMN1Q8IY45 258 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 BORCS7Q96B45 105 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 TP73-AS1Q9UF72 201 aa2.94□□□□□ -1.94
R3HDM1-218ENST00000487294 BCE1O60756 84 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 TSPAN13O95857 204 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 RPL28P46779 137 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 FAM229BQ4G0N7 80 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 LBHQ53QV2 105 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 FAM104BQ5XKR9 115 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 LINC01551Q86U37 167 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 KRTAP13-1Q8IUC0 172 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 TYMSOSQ8TAI1 123 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 BATF3Q9NR55 127 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 OSTCQ9NRP0 149 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 C22orf24Q9Y442 160 aa2.93□□□□□ -1.94
R3HDM1-218ENST00000487294 TGIF2-C20orf24A0A0A6YYL0 155 aa2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 RPL39P62891 51 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 HBBP68871 147 aa2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 RIGQ13278 110 aa2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 RGS21Q2M5E4 152 aa2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 KRTAP13-2Q52LG2 175 aa2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 PACRGQ96M98 296 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-218ENST00000487294 A0A1B0GW15 77 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 ZNF727A8MUV8 499 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 SMKR1H3BMG3 65 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 C2orf82Q6UX34 121 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 MRPL55Q7Z7F7 128 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 SLC51BQ86UW2 128 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 LINC00304Q8N9R0 145 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 FAM218AQ96MZ4 157 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 SMIM2Q9BVW6 85 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 V9GYV3 84 aa2.91□□□□□ -1.94
R3HDM1-218ENST00000487294 IGLV4-3A0A075B6K6 122 aa2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 PPBPP02775 128 aa2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 IFI27P40305 119 aaPredicted RBP2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 ASB16-AS1Q495Z4 193 aa2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 LINC00173Q6ZV60 143 aa2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 Q8IZM0 81 aa2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 NAT8BQ9UHF3 227 aa2.9□□□□□ -1.95
R3HDM1-218ENST00000487294 SMIM27A0A1W2PRY6 76 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 CKS2P33552 79 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 FAM74A3Q4VXF1 159 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 Q6ZN92 141 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 FP248Q71RG6 208 aaPredicted RBP2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 TMEM141Q96I45 108 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 AMELXQ99217 191 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 RETNLBQ9BQ08 111 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 SMIM7Q9BQ49 75 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 EIF5A2Q9GZV4 153 aaKnown RBP2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 PPDPFQ9H3Y8 114 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
R3HDM1-218ENST00000487294 A0A1B0GXF2 115 aa2.88□□□□□ -1.95
R3HDM1-218ENST00000487294 F8VRH5 84 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms