RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
NR1H3-223ENST00000486991 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
NR1H3-223ENST00000486991 IGHV3-64A0A075B6Q5 118 aa8.54□□□□□ -1.04
NR1H3-223ENST00000486991 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
NR1H3-223ENST00000486991 hDV102S1A0JD36 115 aa8.53□□□□□ -1.04
NR1H3-223ENST00000486991 SMIM1B2RUZ4 78 aa8.53□□□□□ -1.04
NR1H3-223ENST00000486991 AKR1D1P51857 326 aa8.53□□□□□ -1.04
NR1H3-223ENST00000486991 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
NR1H3-223ENST00000486991 TOMM7Q9P0U1 55 aa8.53□□□□□ -1.04
NR1H3-223ENST00000486991 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
NR1H3-223ENST00000486991 SPAG11BQ08648 103 aa8.52□□□□□ -1.05
NR1H3-223ENST00000486991 LINC00526Q96FQ7 95 aa8.52□□□□□ -1.05
NR1H3-223ENST00000486991 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
NR1H3-223ENST00000486991 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
NR1H3-223ENST00000486991 ZNF561-AS1K7EIQ3 104 aa8.51□□□□□ -1.05
NR1H3-223ENST00000486991 PRSS2P07478 247 aa8.51□□□□□ -1.05
NR1H3-223ENST00000486991 HERVK_113P61574 105 aa8.51□□□□□ -1.05
NR1H3-223ENST00000486991 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
NR1H3-223ENST00000486991 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
NR1H3-223ENST00000486991 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
NR1H3-223ENST00000486991 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
NR1H3-223ENST00000486991 JOSD1Q15040 202 aaPredicted RBP8.49□□□□□ -1.05
NR1H3-223ENST00000486991 C6orf226Q5I0X4 101 aa8.49□□□□□ -1.05
NR1H3-223ENST00000486991 STPG4Q8N801 248 aa8.49□□□□□ -1.05
NR1H3-223ENST00000486991 KIAA0087Q14695 138 aa8.48□□□□□ -1.05
NR1H3-223ENST00000486991 Q8IZM0 81 aa8.48□□□□□ -1.05
NR1H3-223ENST00000486991 LEPROTO15243 131 aa8.47□□□□□ -1.05
NR1H3-223ENST00000486991 CKS1BP61024 79 aa8.47□□□□□ -1.05
NR1H3-223ENST00000486991 CAMK2N2Q96S95 79 aa8.47□□□□□ -1.05
NR1H3-223ENST00000486991 HSBP1L1C9JCN9 74 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 E9PLD3 99 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 J3QL48 77 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 MAJINQ3KP22 176 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 C2orf82Q6UX34 121 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 C2orf48Q96LS8 159 aa8.46□□□□□ -1.06
NR1H3-223ENST00000486991 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.06
NR1H3-223ENST00000486991 LOC105371267A0A1B0GV96 52 aa8.45□□□□□ -1.06
NR1H3-223ENST00000486991 NDUFA1O15239 70 aa8.45□□□□□ -1.06
NR1H3-223ENST00000486991 SYCNQ0VAF6 134 aa8.45□□□□□ -1.06
NR1H3-223ENST00000486991 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
NR1H3-223ENST00000486991 Q6ZSA8 131 aa8.45□□□□□ -1.06
NR1H3-223ENST00000486991 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
NR1H3-223ENST00000486991 J3QQQ9 107 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 SLPIP03973 132 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
NR1H3-223ENST00000486991 CXCL5P42830 114 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 Q6ZRU5 148 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
NR1H3-223ENST00000486991 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
NR1H3-223ENST00000486991 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
NR1H3-223ENST00000486991 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.43□□□□□ -1.06
NR1H3-223ENST00000486991 F8WDY8 70 aa8.43□□□□□ -1.06
NR1H3-223ENST00000486991 NMUP48645 174 aa8.43□□□□□ -1.06
NR1H3-223ENST00000486991 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
NR1H3-223ENST00000486991 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
NR1H3-223ENST00000486991 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
NR1H3-223ENST00000486991 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
NR1H3-223ENST00000486991 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
NR1H3-223ENST00000486991 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
NR1H3-223ENST00000486991 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
NR1H3-223ENST00000486991 ZNF625Q96I27 306 aaPredicted RBP8.41□□□□□ -1.06
NR1H3-223ENST00000486991 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
NR1H3-223ENST00000486991 PAM16Q9Y3D7 125 aa8.41□□□□□ -1.06
NR1H3-223ENST00000486991 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
NR1H3-223ENST00000486991 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
NR1H3-223ENST00000486991 LINC00528Q8N1L1 170 aa8.4□□□□□ -1.06
NR1H3-223ENST00000486991 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.06
NR1H3-223ENST00000486991 SPATA45Q537H7 98 aa8.39□□□□□ -1.07
NR1H3-223ENST00000486991 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
NR1H3-223ENST00000486991 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
NR1H3-223ENST00000486991 C9orf163Q8N9P6 203 aa8.39□□□□□ -1.07
NR1H3-223ENST00000486991 ZNF815PA8K554 130 aa8.38□□□□□ -1.07
NR1H3-223ENST00000486991 HERV-K104P63124 156 aa8.38□□□□□ -1.07
NR1H3-223ENST00000486991 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
NR1H3-223ENST00000486991 PCP2Q8IVA1 136 aa8.38□□□□□ -1.07
NR1H3-223ENST00000486991 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
NR1H3-223ENST00000486991 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
NR1H3-223ENST00000486991 MEIG1Q5JSS6 88 aa8.37□□□□□ -1.07
NR1H3-223ENST00000486991 SMIM6P0DI80 62 aa8.36□□□□□ -1.07
NR1H3-223ENST00000486991 PFN2P35080 140 aa8.36□□□□□ -1.07
NR1H3-223ENST00000486991 S100A12P80511 92 aa8.36□□□□□ -1.07
NR1H3-223ENST00000486991 RPL18AQ02543 176 aaKnown RBP8.36□□□□□ -1.07
NR1H3-223ENST00000486991 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
NR1H3-223ENST00000486991 A0A0U1RRA0 63 aa8.35□□□□□ -1.07
NR1H3-223ENST00000486991 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
NR1H3-223ENST00000486991 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
NR1H3-223ENST00000486991 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
NR1H3-223ENST00000486991 SMIM13P0DJ93 91 aa8.34□□□□□ -1.07
NR1H3-223ENST00000486991 LINC00158P58513 81 aa8.34□□□□□ -1.07
NR1H3-223ENST00000486991 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
NR1H3-223ENST00000486991 C14orf144Q96I85 54 aa8.34□□□□□ -1.07
NR1H3-223ENST00000486991 PKIGQ9Y2B9 76 aa8.34□□□□□ -1.07
NR1H3-223ENST00000486991 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
NR1H3-223ENST00000486991 COX8AP10176 69 aa8.33□□□□□ -1.08
NR1H3-223ENST00000486991 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
NR1H3-223ENST00000486991 GAGE2EQ4V326 116 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms