RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
MCF2L-226ENST00000486210 SLPIP03973 132 aa11.33□□□□□ -0.6
MCF2L-226ENST00000486210 MAP1LC3CQ9BXW4 147 aa11.33□□□□□ -0.6
MCF2L-226ENST00000486210 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
MCF2L-226ENST00000486210 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
MCF2L-226ENST00000486210 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
MCF2L-226ENST00000486210 F8VRH5 84 aa11.32□□□□□ -0.6
MCF2L-226ENST00000486210 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-226ENST00000486210 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
MCF2L-226ENST00000486210 SYS1-DBNDD2H3BUS1 97 aa11.31□□□□□ -0.6
MCF2L-226ENST00000486210 APOMO95445 188 aa11.31□□□□□ -0.6
MCF2L-226ENST00000486210 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
MCF2L-226ENST00000486210 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
MCF2L-226ENST00000486210 LINC01561Q8N1V8 128 aa11.31□□□□□ -0.6
MCF2L-226ENST00000486210 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
MCF2L-226ENST00000486210 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
MCF2L-226ENST00000486210 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
MCF2L-226ENST00000486210 TMA7Q9Y2S6 64 aaKnown RBP11.3□□□□□ -0.6
MCF2L-226ENST00000486210 SMIM1B2RUZ4 78 aa11.29□□□□□ -0.6
MCF2L-226ENST00000486210 S100A2P29034 98 aa11.29□□□□□ -0.6
MCF2L-226ENST00000486210 SPAG11BQ08648 103 aa11.29□□□□□ -0.6
MCF2L-226ENST00000486210 KRTDAPP60985 99 aa11.28□□□□□ -0.6
MCF2L-226ENST00000486210 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
MCF2L-226ENST00000486210 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
MCF2L-226ENST00000486210 OR10D4PQ8NGN7 298 aa11.28□□□□□ -0.6
MCF2L-226ENST00000486210 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
MCF2L-226ENST00000486210 PET117Q6UWS5 81 aa11.27□□□□□ -0.61
MCF2L-226ENST00000486210 LRP2P98164 4655 aa11.26□□□□□ -0.61
MCF2L-226ENST00000486210 H3BRM9 83 aa11.26□□□□□ -0.61
MCF2L-226ENST00000486210 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
MCF2L-226ENST00000486210 RPL37AP61513 92 aaKnown RBP11.26□□□□□ -0.61
MCF2L-226ENST00000486210 CNBPP62633 177 aaKnown RBP11.26□□□□□ -0.61
MCF2L-226ENST00000486210 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
MCF2L-226ENST00000486210 DPM2O94777 84 aa11.25□□□□□ -0.61
MCF2L-226ENST00000486210 LINC01545Q5VT33 79 aa11.25□□□□□ -0.61
MCF2L-226ENST00000486210 TNXBP22105 4242 aa11.24□□□□□ -0.61
MCF2L-226ENST00000486210 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
MCF2L-226ENST00000486210 IGKCP01834 107 aa11.24□□□□□ -0.61
MCF2L-226ENST00000486210 IGLV5-39A0A0G2JS06 123 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 PLNP26678 52 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 Q6ZRU5 148 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 CAMK2N2Q96S95 79 aa11.23□□□□□ -0.61
MCF2L-226ENST00000486210 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
MCF2L-226ENST00000486210 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
MCF2L-226ENST00000486210 UNQ6190/PRO20217Q6UXQ8 127 aa11.22□□□□□ -0.61
MCF2L-226ENST00000486210 Q8IZM0 81 aa11.22□□□□□ -0.61
MCF2L-226ENST00000486210 PRSS2P07478 247 aa11.21□□□□□ -0.61
MCF2L-226ENST00000486210 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
MCF2L-226ENST00000486210 CARD19Q96LW7 228 aa11.21□□□□□ -0.61
MCF2L-226ENST00000486210 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-226ENST00000486210 C6orf226Q5I0X4 101 aa11.2□□□□□ -0.62
MCF2L-226ENST00000486210 NDUFA1O15239 70 aa11.19□□□□□ -0.62
MCF2L-226ENST00000486210 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
MCF2L-226ENST00000486210 C6orf48Q9UBA6 75 aa11.18□□□□□ -0.62
MCF2L-226ENST00000486210 F8WDY8 70 aa11.17□□□□□ -0.62
MCF2L-226ENST00000486210 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
MCF2L-226ENST00000486210 C20orf202A1L168 122 aa11.16□□□□□ -0.62
MCF2L-226ENST00000486210 CKS1BP61024 79 aa11.16□□□□□ -0.62
MCF2L-226ENST00000486210 ATOH7Q8N100 152 aa11.16□□□□□ -0.62
MCF2L-226ENST00000486210 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-226ENST00000486210 TSPEAR-AS2P59090 65 aa11.15□□□□□ -0.62
MCF2L-226ENST00000486210 STPG4Q8N801 248 aa11.15□□□□□ -0.62
MCF2L-226ENST00000486210 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
MCF2L-226ENST00000486210 C9orf116Q5BN46 136 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-226ENST00000486210 PANO1I0J062 215 aa11.13□□□□□ -0.63
MCF2L-226ENST00000486210 LEPROTO15243 131 aa11.13□□□□□ -0.63
MCF2L-226ENST00000486210 CXCL5P42830 114 aa11.13□□□□□ -0.63
MCF2L-226ENST00000486210 HERVK_113P61574 105 aa11.13□□□□□ -0.63
MCF2L-226ENST00000486210 TRBV30A0A0K0K1B3 111 aa11.12□□□□□ -0.63
MCF2L-226ENST00000486210 E9PLD3 99 aa11.11□□□□□ -0.63
MCF2L-226ENST00000486210 CHTF8P0CG12 524 aa11.11□□□□□ -0.63
MCF2L-226ENST00000486210 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-226ENST00000486210 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
MCF2L-226ENST00000486210 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
MCF2L-226ENST00000486210 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
MCF2L-226ENST00000486210 A0A096LNI7 61 aa11.09□□□□□ -0.63
MCF2L-226ENST00000486210 LOC107984640A0A0U1RRK4 108 aa11.09□□□□□ -0.63
MCF2L-226ENST00000486210 J3QQQ9 107 aa11.09□□□□□ -0.63
MCF2L-226ENST00000486210 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
MCF2L-226ENST00000486210 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
MCF2L-226ENST00000486210 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
MCF2L-226ENST00000486210 IGKV2-24A0A0C4DH68 120 aa11.08□□□□□ -0.64
MCF2L-226ENST00000486210 TLX1NBP0CAT3 122 aa11.08□□□□□ -0.64
MCF2L-226ENST00000486210 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
MCF2L-226ENST00000486210 Q6ZRP5 223 aa11.08□□□□□ -0.64
MCF2L-226ENST00000486210 C7orf33Q8WU49 177 aa11.08□□□□□ -0.64
MCF2L-226ENST00000486210 A0A087WYN8 130 aa11.07□□□□□ -0.64
MCF2L-226ENST00000486210 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
MCF2L-226ENST00000486210 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
MCF2L-226ENST00000486210 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
MCF2L-226ENST00000486210 AKR1D1P51857 326 aa11.06□□□□□ -0.64
MCF2L-226ENST00000486210 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
MCF2L-226ENST00000486210 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
MCF2L-226ENST00000486210 NDUFC2-KCTD14E9PQ53 114 aa11.05□□□□□ -0.64
MCF2L-226ENST00000486210 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-226ENST00000486210 TTTY13Q9BZ97 58 aa11.05□□□□□ -0.64
MCF2L-226ENST00000486210 PKIGQ9Y2B9 76 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms