RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	SMR3B	P02814	79 aa	Predicted RBP	3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	MT-ND6	P03923	174 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	CKS2	P33552	79 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	HINT1	P49773	126 aa	Predicted RBP	3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	LINC01620	Q4KN68	170 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	ENHO	Q6UWT2	76 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365		Q8N814	137 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	ORAOV1	Q8WV07	137 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	DPH3	Q96FX2	82 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	TMEM101	Q96IK0	257 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	GNB1L	Q9BYB4	327 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	TP73-AS1	Q9UF72	201 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	LAMTOR2	Q9Y2Q5	125 aa		3.09	□□□□□ -1.91
SFPQ-208	ENST00000485365	FRAS1	Q86XX4	4008 aa		3.09	□□□□□ -1.92
SFPQ-208	ENST00000485365	IGLV4-60	A0A075B6I1	120 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	LOC389332	A0A1B0GUA5	103 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	SMIM27	A0A1W2PRY6	76 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	LRCOL1	A6NCL2	159 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	KRTAP1-4	P0C5Y4	121 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	REG3A	Q06141	175 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	WFDC2	Q14508	124 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	LAGE3	Q14657	143 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	COX19	Q49B96	90 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	MRPL51	Q4U2R6	128 aa	Known RBP	3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	ERAS	Q7Z444	233 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	C18orf32	Q8TCD1	76 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	RNF185	Q96GF1	192 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	CHCHD7	Q9BUK0	85 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	CNFN	Q9BYD5	112 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	TMEM191A	Q9H0A3	160 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	DNAH17	Q9UFH2	4485 aa		3.08	□□□□□ -1.92
SFPQ-208	ENST00000485365	C20orf202	A1L168	122 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	FAM231B	A6NCW3	169 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	FGF6	P10767	208 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	HBB	P68871	147 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	MIA	Q16674	131 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	FAM104B	Q5XKR9	115 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	C20orf203	Q8NBC4	194 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365		Q8NBF4	154 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	OR5A1	Q8NGJ0	315 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	MRAP2	Q96G30	205 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	C2orf48	Q96LS8	159 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	KIR2DL4	Q99706	377 aa		3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.07	□□□□□ -1.92
SFPQ-208	ENST00000485365	BIRC6	Q9NR09	4857 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365		A0A1B0GW15	77 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365		D6R8Y8	96 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	HSBP1	O75506	76 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	PPP1R17	O96001	155 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	XCL1	P47992	114 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	PMCHL1	Q16048	86 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	RNASE13	Q5GAN3	156 aa	Known RBP	3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	LINC00173	Q6ZV60	143 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	TMEM70	Q9BUB7	260 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	FAT2	Q9NYQ8	4349 aa		3.06	□□□□□ -1.92
SFPQ-208	ENST00000485365	TRAV13-1	A0A0B4J241	112 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	TRAV8-4	A0A0B4J246	113 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	TRBV6-5	A0A0K0K1A5	114 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365		A0A1B0GXF2	115 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	EPM2A	B3EWF7	344 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	TAX1BP3	O14907	124 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	POLR2K	P53803	58 aa	Known RBP	3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	SS18	Q15532	418 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	VAMP3	Q15836	100 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	HIGD2B	Q4VC39	106 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	BVES-AS1	Q5T3Y7	98 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	ORMDL3	Q8N138	153 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	PRELID3A	Q96N28	172 aa		3.05	□□□□□ -1.92
SFPQ-208	ENST00000485365	HECTD4	Q9Y4D8	3996 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	NPY	P01303	97 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	PPBP	P02775	128 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	SMAGP	Q0VAQ4	97 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	ATP5L2	Q7Z4Y8	100 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	FAM218A	Q96MZ4	157 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	MAP1LC3A	Q9H492	121 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	PRO0461	Q9UI25	63 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	PKD1	P98161	4303 aa		3.04	□□□□□ -1.92
SFPQ-208	ENST00000485365	DNAH11	Q96DT5	4516 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	TRBV27	A0A0K0K1C4	114 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	LINC00959	A0A1B0GUT2	108 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365		H0Y8G0	127 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	SYS1-DBNDD2	H3BUS1	97 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	RPL39	P62891	51 aa	Known RBP	3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	SLC25A34	Q6PIV7	304 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	C5orf38	Q86SI9	138 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	CHCHD1	Q96BP2	118 aa	Known RBP	3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	LINC00526	Q96FQ7	95 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	C20orf78	Q9BR46	151 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	SMIM2	Q9BVW6	85 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	CST9L	Q9H4G1	147 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	CDC42SE2	Q9NRR3	84 aa		3.03	□□□□□ -1.92
SFPQ-208	ENST00000485365	HSBP1L1	C9JCN9	74 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	LEPROTL1	O95214	131 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	INAFM2	P0DMQ5	153 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365		Q5VSD8	79 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	PET117	Q6UWS5	81 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365		Q6ZUT4	128 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	C2orf91	Q6ZV80	131 aa		3.02	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms