RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TMEM241Q24JQ0 296 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 Q6ZUT4 128 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 LINC00518Q8N0U6 118 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 ORAOV1Q8WV07 137 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 TIMM21Q9BVV7 248 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 SMKR1H3BMG3 65 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 RPL13AP40429 203 aaKnown RBP3.54□□□□□ -1.84
CSDE1-207ENST00000483407 UBE2BP63146 152 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 PRR4Q16378 134 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 FAM19A5Q7Z5A7 132 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-207ENST00000483407 LINC01551Q86U37 167 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 TCTE3Q8IZS6 198 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 SMIM7Q9BQ49 75 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 OSTCQ9NRP0 149 aa3.54□□□□□ -1.84
CSDE1-207ENST00000483407 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 LINC00862A6NCI5 91 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 ZNF727A8MUV8 499 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 HBBP68871 147 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 C20orf78Q9BR46 151 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 EIF5A2Q9GZV4 153 aaKnown RBP3.53□□□□□ -1.84
CSDE1-207ENST00000483407 SMDT1Q9H4I9 107 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 NAT8BQ9UHF3 227 aa3.53□□□□□ -1.84
CSDE1-207ENST00000483407 TGIF2-C20orf24A0A0A6YYL0 155 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 M0QXV9 152 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 CKS2P33552 79 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
CSDE1-207ENST00000483407 RPL32P62910 135 aaKnown RBP3.52□□□□□ -1.85
CSDE1-207ENST00000483407 MRPS36P82909 103 aaKnown RBP3.52□□□□□ -1.85
CSDE1-207ENST00000483407 MRPL51Q4U2R6 128 aaKnown RBP3.52□□□□□ -1.85
CSDE1-207ENST00000483407 FAM104BQ5XKR9 115 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 UNQ6190/PRO20217Q6UXQ8 127 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 PACRGQ96M98 296 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-207ENST00000483407 SPANXA1Q9NS26 97 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 C6orf48Q9UBA6 75 aa3.52□□□□□ -1.85
CSDE1-207ENST00000483407 IGLV7-46A0A075B6I9 117 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 TRBV24-1A0A075B6N3 115 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 TRBV30A0A0K0K1B3 111 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 A0A1B0GW15 77 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 S100A8P05109 93 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 IFI27P40305 119 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-207ENST00000483407 ALKAL2Q6UX46 152 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 SMIM2Q9BVW6 85 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 CARHSP1Q9Y2V2 147 aaKnown RBP3.51□□□□□ -1.85
CSDE1-207ENST00000483407 V9GYV3 84 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 LPAP08519 4548 aa3.51□□□□□ -1.85
CSDE1-207ENST00000483407 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
CSDE1-207ENST00000483407 F8W036 122 aa3.5□□□□□ -1.85
CSDE1-207ENST00000483407 RAB5AP20339 215 aa3.5□□□□□ -1.85
CSDE1-207ENST00000483407 FAM74A3Q4VXF1 159 aa3.5□□□□□ -1.85
CSDE1-207ENST00000483407 SMIM27A0A1W2PRY6 76 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 D6R8Y8 96 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 NUPR1O60356 82 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 ZNF861PO60384 105 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 PPBPP02775 128 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 SRP19P09132 144 aaKnown RBP3.49□□□□□ -1.85
CSDE1-207ENST00000483407 KIAA0087Q14695 138 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 ADIRFQ15847 76 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 FAM104AQ969W3 186 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 C2orf88Q9BSF0 95 aa3.49□□□□□ -1.85
CSDE1-207ENST00000483407 IGLV4-3A0A075B6K6 122 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 TSPAN13O95857 204 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 NPYP01303 97 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 CKS1BP61024 79 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 RPL23P62829 140 aaKnown RBP3.48□□□□□ -1.85
CSDE1-207ENST00000483407 C9orf129Q5T035 196 aaKnown RBP3.48□□□□□ -1.85
CSDE1-207ENST00000483407 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 Q6ZN92 141 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 TEX43Q6ZNM6 134 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 ORMDL3Q8N138 153 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 LINC01561Q8N1V8 128 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 Q8NBF4 154 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 NAT8Q9UHE5 227 aa3.48□□□□□ -1.85
CSDE1-207ENST00000483407 RPL28P46779 137 aaKnown RBP3.47□□□□□ -1.85
CSDE1-207ENST00000483407 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
CSDE1-207ENST00000483407 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 ZC2HC1BQ5TFG8 222 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 MRPL54Q6P161 138 aaKnown RBP3.47□□□□□ -1.85
CSDE1-207ENST00000483407 TMEM136Q6ZRR5 245 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 AKAP14Q86UN6 197 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 TYMSOSQ8TAI1 123 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 TOMM7Q9P0U1 55 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 C22orf24Q9Y442 160 aa3.47□□□□□ -1.85
CSDE1-207ENST00000483407 A0A1B0GXF2 115 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 CRYGAP11844 174 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 ERASQ7Z444 233 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 MRPL55Q7Z7F7 128 aaKnown RBP3.46□□□□□ -1.86
CSDE1-207ENST00000483407 Q8IZM0 81 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 LINC00469Q8N7U9 141 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 PRELID3AQ96N28 172 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 VCX2Q9H322 139 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 XAGE1AQ9HD64 81 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 TP73-AS1Q9UF72 201 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms