RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 NDUFC2-KCTD14E9PQ53 114 aa7.38□□□□□ -1.23
HMGN1-213ENST00000482192 GAGE2EQ4V326 116 aa7.38□□□□□ -1.23
HMGN1-213ENST00000482192 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
HMGN1-213ENST00000482192 LINC00469Q8N7U9 141 aa7.38□□□□□ -1.23
HMGN1-213ENST00000482192 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
HMGN1-213ENST00000482192 GAGE2DQ9UEU5 116 aa7.38□□□□□ -1.23
HMGN1-213ENST00000482192 HERC1Q15751 4861 aa7.37□□□□□ -1.23
HMGN1-213ENST00000482192 TINCRA0A1B0GVN0 87 aa7.37□□□□□ -1.23
HMGN1-213ENST00000482192 PMVKQ15126 192 aa7.37□□□□□ -1.23
HMGN1-213ENST00000482192 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
HMGN1-213ENST00000482192 C18orf32Q8TCD1 76 aa7.37□□□□□ -1.23
HMGN1-213ENST00000482192 IGLV5-45A0A087WSX0 123 aa7.36□□□□□ -1.23
HMGN1-213ENST00000482192 FAM168BA1KXE4 195 aa7.36□□□□□ -1.23
HMGN1-213ENST00000482192 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
HMGN1-213ENST00000482192 SERTAD4-AS1Q5TG53 156 aa7.36□□□□□ -1.23
HMGN1-213ENST00000482192 PHF5AQ7RTV0 110 aaKnown RBP7.36□□□□□ -1.23
HMGN1-213ENST00000482192 SMIM1B2RUZ4 78 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 F8VRH5 84 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 LINC00614P0C842 121 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 CXCL5P42830 114 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
HMGN1-213ENST00000482192 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
HMGN1-213ENST00000482192 A0A096LNJ9 63 aa7.34□□□□□ -1.23
HMGN1-213ENST00000482192 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
HMGN1-213ENST00000482192 HBDP02042 147 aa7.34□□□□□ -1.23
HMGN1-213ENST00000482192 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
HMGN1-213ENST00000482192 RAB5BP61020 215 aa7.34□□□□□ -1.23
HMGN1-213ENST00000482192 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
HMGN1-213ENST00000482192 SRSF9Q13242 221 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGN1-213ENST00000482192 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
HMGN1-213ENST00000482192 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
HMGN1-213ENST00000482192 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
HMGN1-213ENST00000482192 YPEL4Q96NS1 127 aa7.33□□□□□ -1.24
HMGN1-213ENST00000482192 H3BRM9 83 aa7.32□□□□□ -1.24
HMGN1-213ENST00000482192 M0QXV9 152 aa7.32□□□□□ -1.24
HMGN1-213ENST00000482192 C1orf137Q5JT78 98 aa7.32□□□□□ -1.24
HMGN1-213ENST00000482192 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
HMGN1-213ENST00000482192 LINC01600Q96MT4 127 aa7.32□□□□□ -1.24
HMGN1-213ENST00000482192 ATP5LO75964 103 aa7.31□□□□□ -1.24
HMGN1-213ENST00000482192 SPINK8P0C7L1 97 aa7.31□□□□□ -1.24
HMGN1-213ENST00000482192 IGLC3P0DOY3 106 aa7.31□□□□□ -1.24
HMGN1-213ENST00000482192 NDUFA6P56556 154 aa7.31□□□□□ -1.24
HMGN1-213ENST00000482192 PMCHL1Q16048 86 aa7.31□□□□□ -1.24
HMGN1-213ENST00000482192 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
HMGN1-213ENST00000482192 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
HMGN1-213ENST00000482192 IGLV7-43P04211 117 aa7.29□□□□□ -1.24
HMGN1-213ENST00000482192 UBE2BP63146 152 aa7.29□□□□□ -1.24
HMGN1-213ENST00000482192 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
HMGN1-213ENST00000482192 CBLN2Q8IUK8 224 aa7.29□□□□□ -1.24
HMGN1-213ENST00000482192 CHCHD1Q96BP2 118 aaKnown RBP7.29□□□□□ -1.24
HMGN1-213ENST00000482192 IGLV5-39A0A0G2JS06 123 aa7.27□□□□□ -1.25
HMGN1-213ENST00000482192 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-213ENST00000482192 BAGE3Q86Y29 109 aa7.27□□□□□ -1.25
HMGN1-213ENST00000482192 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
HMGN1-213ENST00000482192 ODF1Q14990 250 aa7.26□□□□□ -1.25
HMGN1-213ENST00000482192 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
HMGN1-213ENST00000482192 DIRC1Q969H9 104 aa7.26□□□□□ -1.25
HMGN1-213ENST00000482192 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
HMGN1-213ENST00000482192 SLC7A5P1Q8MH63 180 aa7.25□□□□□ -1.25
HMGN1-213ENST00000482192 TP73-AS1Q9UF72 201 aa7.25□□□□□ -1.25
HMGN1-213ENST00000482192 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
HMGN1-213ENST00000482192 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
HMGN1-213ENST00000482192 C11orf86A6NJI1 115 aa7.24□□□□□ -1.25
HMGN1-213ENST00000482192 HSBP1O75506 76 aa7.24□□□□□ -1.25
HMGN1-213ENST00000482192 TMEM170BQ5T4T1 132 aa7.24□□□□□ -1.25
HMGN1-213ENST00000482192 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
HMGN1-213ENST00000482192 IFI27L1Q96BM0 104 aa7.24□□□□□ -1.25
HMGN1-213ENST00000482192 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
HMGN1-213ENST00000482192 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
HMGN1-213ENST00000482192 H0Y9J4 135 aa7.23□□□□□ -1.25
HMGN1-213ENST00000482192 TRGC2P03986 189 aa7.23□□□□□ -1.25
HMGN1-213ENST00000482192 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
HMGN1-213ENST00000482192 MRPL55Q7Z7F7 128 aaKnown RBP7.23□□□□□ -1.25
HMGN1-213ENST00000482192 NUPR1O60356 82 aa7.22□□□□□ -1.25
HMGN1-213ENST00000482192 PFN2P35080 140 aa7.22□□□□□ -1.25
HMGN1-213ENST00000482192 COX17Q14061 63 aa7.21□□□□□ -1.26
HMGN1-213ENST00000482192 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
HMGN1-213ENST00000482192 ERG28Q9UKR5 140 aa7.21□□□□□ -1.26
HMGN1-213ENST00000482192 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
HMGN1-213ENST00000482192 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
HMGN1-213ENST00000482192 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
HMGN1-213ENST00000482192 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
HMGN1-213ENST00000482192 ZNF861PO60384 105 aa7.19□□□□□ -1.26
HMGN1-213ENST00000482192 ZNF625Q96I27 306 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-213ENST00000482192 LINC00167Q96N53 147 aa7.19□□□□□ -1.26
HMGN1-213ENST00000482192 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
HMGN1-213ENST00000482192 RPL37AP8A6NKH3 93 aa7.18□□□□□ -1.26
HMGN1-213ENST00000482192 COLCA2A8K830 154 aa7.18□□□□□ -1.26
HMGN1-213ENST00000482192 BCE1O60756 84 aa7.18□□□□□ -1.26
HMGN1-213ENST00000482192 SERF1AO75920 110 aa7.18□□□□□ -1.26
HMGN1-213ENST00000482192 GAGE10A6NGK3 116 aa7.17□□□□□ -1.26
HMGN1-213ENST00000482192 LEPROTL1O95214 131 aa7.17□□□□□ -1.26
HMGN1-213ENST00000482192 LINC00310P59036 64 aa7.17□□□□□ -1.26
HMGN1-213ENST00000482192 IGLV1-50A0A075B6I6 118 aa7.16□□□□□ -1.26
HMGN1-213ENST00000482192 H0Y8G0 127 aa7.16□□□□□ -1.26
HMGN1-213ENST00000482192 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
HMGN1-213ENST00000482192 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-213ENST00000482192 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms