RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 A0A087WZ39 114 aa5.86□□□□□ -1.47
VCP-206ENST00000480327 TINCRA0A1B0GVN0 87 aa5.86□□□□□ -1.47
VCP-206ENST00000480327 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
VCP-206ENST00000480327 SPAG11BQ08648 103 aa5.86□□□□□ -1.47
VCP-206ENST00000480327 CHAC1Q9BUX1 264 aa5.86□□□□□ -1.47
VCP-206ENST00000480327 HSPB8Q9UJY1 196 aa5.86□□□□□ -1.47
VCP-206ENST00000480327 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
VCP-206ENST00000480327 SPINK8P0C7L1 97 aa5.85□□□□□ -1.47
VCP-206ENST00000480327 DDTP30046 118 aa5.85□□□□□ -1.47
VCP-206ENST00000480327 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
VCP-206ENST00000480327 PACRGQ96M98 296 aaPredicted RBP5.85□□□□□ -1.47
VCP-206ENST00000480327 MRPL35Q9NZE8 188 aaKnown RBP5.85□□□□□ -1.47
VCP-206ENST00000480327 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
VCP-206ENST00000480327 TRAV12-1A0A0B4J245 112 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 C11orf86A6NJI1 115 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 IGLC3P0DOY3 106 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
VCP-206ENST00000480327 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 Q6ZSA8 131 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 OR10D4PQ8NGN7 298 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 CAMK2N2Q96S95 79 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 PMCHL2Q9BQD1 86 aa5.84□□□□□ -1.47
VCP-206ENST00000480327 IGLV5-45A0A087WSX0 123 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
VCP-206ENST00000480327 KRTAP29-1A8MX34 341 aaPredicted RBP5.83□□□□□ -1.48
VCP-206ENST00000480327 ZNF22P17026 224 aaPredicted RBP5.83□□□□□ -1.48
VCP-206ENST00000480327 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
VCP-206ENST00000480327 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 ODF1Q14990 250 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 Q6ZRU5 148 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 C9orf163Q8N9P6 203 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 CARD19Q96LW7 228 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 MAP1LC3CQ9BXW4 147 aa5.83□□□□□ -1.48
VCP-206ENST00000480327 SMIM1B2RUZ4 78 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 F8VRH5 84 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 H3BRM9 83 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 J3QL48 77 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 PRSS2P07478 247 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 PYY3Q5JQD4 70 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 C2orf82Q6UX34 121 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 LINC01561Q8N1V8 128 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 C2orf48Q96LS8 159 aa5.82□□□□□ -1.48
VCP-206ENST00000480327 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
VCP-206ENST00000480327 KRTDAPP60985 99 aa5.81□□□□□ -1.48
VCP-206ENST00000480327 C10orf25Q5T742 122 aa5.81□□□□□ -1.48
VCP-206ENST00000480327 SDIM1Q6ZPB5 146 aa5.81□□□□□ -1.48
VCP-206ENST00000480327 LINC00528Q8N1L1 170 aa5.81□□□□□ -1.48
VCP-206ENST00000480327 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
VCP-206ENST00000480327 SYS1-DBNDD2H3BUS1 97 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 NDUFA1O15239 70 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 C3orf79P0CE67 100 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 CHTF8P0CG12 524 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 CKS1BP61024 79 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 Q8IZM0 81 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 HIST3H2BBQ8N257 126 aa5.8□□□□□ -1.48
VCP-206ENST00000480327 IGKV2-24A0A0C4DH68 120 aa5.79□□□□□ -1.48
VCP-206ENST00000480327 PANO1I0J062 215 aa5.79□□□□□ -1.48
VCP-206ENST00000480327 DPM2O94777 84 aa5.79□□□□□ -1.48
VCP-206ENST00000480327 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
VCP-206ENST00000480327 C6orf48Q9UBA6 75 aa5.79□□□□□ -1.48
VCP-206ENST00000480327 A0A096LNI7 61 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 IGKCP01834 107 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 PLNP26678 52 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 GAGE2BQ13066 116 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 C21orf62-AS1Q17RA5 79 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 SCXQ7RTU7 201 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 DPH3Q96FX2 82 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 HIST1H2BLQ99880 126 aa5.78□□□□□ -1.48
VCP-206ENST00000480327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
VCP-206ENST00000480327 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
VCP-206ENST00000480327 LOC107984640A0A0U1RRK4 108 aa5.77□□□□□ -1.49
VCP-206ENST00000480327 F8WDY8 70 aa5.77□□□□□ -1.49
VCP-206ENST00000480327 DLEU1O43261 78 aa5.77□□□□□ -1.49
VCP-206ENST00000480327 PLA2G1BP04054 148 aaKnown RBP5.77□□□□□ -1.49
VCP-206ENST00000480327 RPL18AQ02543 176 aaKnown RBP5.77□□□□□ -1.49
VCP-206ENST00000480327 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
VCP-206ENST00000480327 TRBV30A0A0K0K1B3 111 aa5.76□□□□□ -1.49
VCP-206ENST00000480327 M0R143 59 aa5.76□□□□□ -1.49
VCP-206ENST00000480327 JOSD1Q15040 202 aaPredicted RBP5.76□□□□□ -1.49
VCP-206ENST00000480327 RNF151Q2KHN1 245 aa5.76□□□□□ -1.49
VCP-206ENST00000480327 MAJINQ3KP22 176 aa5.76□□□□□ -1.49
VCP-206ENST00000480327 LINC01545Q5VT33 79 aa5.76□□□□□ -1.49
VCP-206ENST00000480327 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
VCP-206ENST00000480327 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
VCP-206ENST00000480327 CXCL5P42830 114 aa5.75□□□□□ -1.49
VCP-206ENST00000480327 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
VCP-206ENST00000480327 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
VCP-206ENST00000480327 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
VCP-206ENST00000480327 TNXBP22105 4242 aa5.75□□□□□ -1.49
VCP-206ENST00000480327 C20orf202A1L168 122 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 HNRNPA3P51991 378 aaKnown RBP5.74□□□□□ -1.49
VCP-206ENST00000480327 PTTG1IPP53801 180 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 HERVK_113P61574 105 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 Q6ZRP5 223 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 STPG4Q8N801 248 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 CIRBP-AS1Q8TBR5 109 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms