RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
ATG4B-219ENST00000479941 PANO1I0J062 215 aa6.91□□□□□ -1.3
ATG4B-219ENST00000479941 CKS1BP61024 79 aa6.91□□□□□ -1.3
ATG4B-219ENST00000479941 UNQ6190/PRO20217Q6UXQ8 127 aa6.91□□□□□ -1.3
ATG4B-219ENST00000479941 SPACA4Q8TDM5 124 aa6.91□□□□□ -1.3
ATG4B-219ENST00000479941 DPH3Q96FX2 82 aa6.91□□□□□ -1.3
ATG4B-219ENST00000479941 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.3
ATG4B-219ENST00000479941 A0A096LNI7 61 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 IGKV2-24A0A0C4DH68 120 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 F8VRH5 84 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
ATG4B-219ENST00000479941 SPINK8P0C7L1 97 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
ATG4B-219ENST00000479941 CXCL5P42830 114 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 C10orf25Q5T742 122 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 C6orf48Q9UBA6 75 aa6.9□□□□□ -1.3
ATG4B-219ENST00000479941 C11orf86A6NJI1 115 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 FABP4P15090 132 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 MAJINQ3KP22 176 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
ATG4B-219ENST00000479941 A0A087WYN8 130 aa6.88□□□□□ -1.31
ATG4B-219ENST00000479941 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
ATG4B-219ENST00000479941 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
ATG4B-219ENST00000479941 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
ATG4B-219ENST00000479941 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
ATG4B-219ENST00000479941 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
ATG4B-219ENST00000479941 COA6Q5JTJ3 125 aaKnown RBP6.88□□□□□ -1.31
ATG4B-219ENST00000479941 TMEM170BQ5T4T1 132 aa6.88□□□□□ -1.31
ATG4B-219ENST00000479941 H0Y8G0 127 aa6.87□□□□□ -1.31
ATG4B-219ENST00000479941 ODF1Q14990 250 aa6.87□□□□□ -1.31
ATG4B-219ENST00000479941 Q5VSD8 79 aa6.87□□□□□ -1.31
ATG4B-219ENST00000479941 MAP1LC3CQ9BXW4 147 aa6.87□□□□□ -1.31
ATG4B-219ENST00000479941 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
ATG4B-219ENST00000479941 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
ATG4B-219ENST00000479941 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
ATG4B-219ENST00000479941 STPG4Q8N801 248 aa6.86□□□□□ -1.31
ATG4B-219ENST00000479941 PLNP26678 52 aa6.85□□□□□ -1.31
ATG4B-219ENST00000479941 Q6ZRP5 223 aa6.85□□□□□ -1.31
ATG4B-219ENST00000479941 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
ATG4B-219ENST00000479941 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
ATG4B-219ENST00000479941 C9orf116Q5BN46 136 aaPredicted RBP6.84□□□□□ -1.31
ATG4B-219ENST00000479941 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
ATG4B-219ENST00000479941 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
ATG4B-219ENST00000479941 DPM2O94777 84 aa6.83□□□□□ -1.32
ATG4B-219ENST00000479941 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
ATG4B-219ENST00000479941 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
ATG4B-219ENST00000479941 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
ATG4B-219ENST00000479941 IGKCP01834 107 aa6.82□□□□□ -1.32
ATG4B-219ENST00000479941 C7orf33Q8WU49 177 aa6.82□□□□□ -1.32
ATG4B-219ENST00000479941 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
ATG4B-219ENST00000479941 A0A1W2PNN7 141 aa6.81□□□□□ -1.32
ATG4B-219ENST00000479941 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
ATG4B-219ENST00000479941 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
ATG4B-219ENST00000479941 HERVK_113P61574 105 aa6.8□□□□□ -1.32
ATG4B-219ENST00000479941 PMCHL2Q9BQD1 86 aa6.8□□□□□ -1.32
ATG4B-219ENST00000479941 S100A6P06703 90 aa6.79□□□□□ -1.32
ATG4B-219ENST00000479941 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
ATG4B-219ENST00000479941 COX17Q14061 63 aa6.79□□□□□ -1.32
ATG4B-219ENST00000479941 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
ATG4B-219ENST00000479941 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
ATG4B-219ENST00000479941 ZNF625Q96I27 306 aaPredicted RBP6.79□□□□□ -1.32
ATG4B-219ENST00000479941 PKHD1L1Q86WI1 4243 aa6.78□□□□□ -1.32
ATG4B-219ENST00000479941 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
ATG4B-219ENST00000479941 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
ATG4B-219ENST00000479941 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 LEPROTO15243 131 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 S100A2P29034 98 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 PFN2P35080 140 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 KRTAP10-4P60372 401 aaPredicted RBP6.77□□□□□ -1.33
ATG4B-219ENST00000479941 KRTDAPP60985 99 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 HERV-K104P63124 156 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 HIST3H2BBQ8N257 126 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
ATG4B-219ENST00000479941 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
ATG4B-219ENST00000479941 C20orf202A1L168 122 aa6.76□□□□□ -1.33
ATG4B-219ENST00000479941 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
ATG4B-219ENST00000479941 J3QQQ9 107 aa6.76□□□□□ -1.33
ATG4B-219ENST00000479941 FAM19A5Q7Z5A7 132 aaPredicted RBP6.76□□□□□ -1.33
ATG4B-219ENST00000479941 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
ATG4B-219ENST00000479941 NMUP48645 174 aa6.75□□□□□ -1.33
ATG4B-219ENST00000479941 AKR1D1P51857 326 aa6.75□□□□□ -1.33
ATG4B-219ENST00000479941 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
ATG4B-219ENST00000479941 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
ATG4B-219ENST00000479941 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
ATG4B-219ENST00000479941 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
ATG4B-219ENST00000479941 E9PLD3 99 aa6.74□□□□□ -1.33
ATG4B-219ENST00000479941 M0QXV9 152 aa6.74□□□□□ -1.33
ATG4B-219ENST00000479941 LGALS3P17931 250 aaKnown RBP6.74□□□□□ -1.33
ATG4B-219ENST00000479941 LINC00158P58513 81 aa6.74□□□□□ -1.33
ATG4B-219ENST00000479941 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
ATG4B-219ENST00000479941 SNRPEP62304 92 aaKnown RBP6.74□□□□□ -1.33
ATG4B-219ENST00000479941 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
ATG4B-219ENST00000479941 HIST1H2BLQ99880 126 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms