RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 FAM19A5Q7Z5A7 132 aaPredicted RBP5.16□□□□□ -1.58
ERCC8-205ENST00000477893 MRPL35Q9NZE8 188 aaKnown RBP5.16□□□□□ -1.58
ERCC8-205ENST00000477893 IGIPA6NJ69 53 aa5.15□□□□□ -1.59
ERCC8-205ENST00000477893 PRSS2P07478 247 aa5.15□□□□□ -1.59
ERCC8-205ENST00000477893 FABP9Q0Z7S8 132 aa5.15□□□□□ -1.59
ERCC8-205ENST00000477893 SCGB3A1Q96QR1 104 aa5.15□□□□□ -1.59
ERCC8-205ENST00000477893 AMELXQ99217 191 aa5.15□□□□□ -1.59
ERCC8-205ENST00000477893 ALKBH7Q9BT30 221 aaPredicted RBP5.15□□□□□ -1.59
ERCC8-205ENST00000477893 MT-ND6P03923 174 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 KIAA0087Q14695 138 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 RHEBQ15382 184 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 RNF151Q2KHN1 245 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 Q6ZRP5 223 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 FA2HQ7L5A8 372 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 TOMM6Q96B49 74 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 PACRGQ96M98 296 aaPredicted RBP5.14□□□□□ -1.59
ERCC8-205ENST00000477893 GNB1LQ9BYB4 327 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 GEMIN7Q9H840 131 aaKnown RBP5.14□□□□□ -1.59
ERCC8-205ENST00000477893 SMCO4Q9NRQ5 59 aa5.14□□□□□ -1.59
ERCC8-205ENST00000477893 K7EMI3 77 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 APOC3P02656 99 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 CKS1BP61024 79 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 ODF1Q14990 250 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 C1orf137Q5JT78 98 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 PAPPA-AS1Q5QFB9 102 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 C10orf91Q5T1B1 145 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 LINC00469Q8N7U9 141 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 TIMM17AQ99595 171 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
ERCC8-205ENST00000477893 CARHSP1Q9Y2V2 147 aaKnown RBP5.13□□□□□ -1.59
ERCC8-205ENST00000477893 F8WDY8 70 aa5.12□□□□□ -1.59
ERCC8-205ENST00000477893 G0S2P27469 103 aa5.12□□□□□ -1.59
ERCC8-205ENST00000477893 HERVK_113P63121 156 aa5.12□□□□□ -1.59
ERCC8-205ENST00000477893 C6orf226Q5I0X4 101 aa5.12□□□□□ -1.59
ERCC8-205ENST00000477893 PLA2G2DQ9UNK4 145 aa5.12□□□□□ -1.59
ERCC8-205ENST00000477893 TRBV30A0A0K0K1B3 111 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 M0QXV9 152 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 SPINK8P0C7L1 97 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 NDUFA6P56556 154 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 UBE2BP63146 152 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 COX19Q49B96 90 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 SERTAD4-AS1Q5TG53 156 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 ERASQ7Z444 233 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 TRAPPC1Q9Y5R8 145 aa5.11□□□□□ -1.59
ERCC8-205ENST00000477893 TNXBP22105 4242 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 NPSP0C0P6 89 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 SEC11AP67812 179 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 NDUFA5Q16718 116 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 C9orf129Q5T035 196 aaKnown RBP5.1□□□□□ -1.59
ERCC8-205ENST00000477893 REG3GQ6UW15 175 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 SPINK6Q6UWN8 80 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 Q8IZM0 81 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 LINC01561Q8N1V8 128 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 XAGE1AQ9HD64 81 aa5.1□□□□□ -1.59
ERCC8-205ENST00000477893 SMIM1B2RUZ4 78 aa5.09□□□□□ -1.59
ERCC8-205ENST00000477893 FAM19A3Q7Z5A8 133 aa5.09□□□□□ -1.59
ERCC8-205ENST00000477893 KRTAP7-1Q8IUC3 87 aa5.09□□□□□ -1.59
ERCC8-205ENST00000477893 SVBPQ8N300 66 aa5.09□□□□□ -1.59
ERCC8-205ENST00000477893 COX7B2Q8TF08 81 aa5.09□□□□□ -1.59
ERCC8-205ENST00000477893 CST9LQ9H4G1 147 aa5.09□□□□□ -1.59
ERCC8-205ENST00000477893 TINCRA0A1B0GVN0 87 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 LINC01546A6NGU7 62 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 F8VRH5 84 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 SNAPINO95295 136 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 PMVKQ15126 192 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 C18orf32Q8TCD1 76 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 URB1-AS1Q96HZ7 61 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 LINC01600Q96MT4 127 aa5.08□□□□□ -1.6
ERCC8-205ENST00000477893 A0A096LNJ9 63 aa5.07□□□□□ -1.6
ERCC8-205ENST00000477893 HBDP02042 147 aa5.07□□□□□ -1.6
ERCC8-205ENST00000477893 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
ERCC8-205ENST00000477893 RAB5BP61020 215 aa5.07□□□□□ -1.6
ERCC8-205ENST00000477893 SRSF9Q13242 221 aaKnown RBP eCLIP5.07□□□□□ -1.6
ERCC8-205ENST00000477893 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
ERCC8-205ENST00000477893 IGLV5-45A0A087WSX0 123 aa5.06□□□□□ -1.6
ERCC8-205ENST00000477893 LINC00614P0C842 121 aa5.06□□□□□ -1.6
ERCC8-205ENST00000477893 PDZD11Q5EBL8 140 aa5.06□□□□□ -1.6
ERCC8-205ENST00000477893 CBLN2Q8IUK8 224 aa5.06□□□□□ -1.6
ERCC8-205ENST00000477893 GAGE10A6NGK3 116 aa5.05□□□□□ -1.6
ERCC8-205ENST00000477893 LINC01549A6NIU2 74 aa5.05□□□□□ -1.6
ERCC8-205ENST00000477893 H3BRM9 83 aa5.05□□□□□ -1.6
ERCC8-205ENST00000477893 CXCL5P42830 114 aa5.05□□□□□ -1.6
ERCC8-205ENST00000477893 C22orf24Q9Y442 160 aa5.05□□□□□ -1.6
ERCC8-205ENST00000477893 ATP5LO75964 103 aa5.04□□□□□ -1.6
ERCC8-205ENST00000477893 IGLC3P0DOY3 106 aa5.04□□□□□ -1.6
ERCC8-205ENST00000477893 ZNF22P17026 224 aaPredicted RBP5.04□□□□□ -1.6
ERCC8-205ENST00000477893 PFN2P35080 140 aa5.04□□□□□ -1.6
ERCC8-205ENST00000477893 BAGE3Q86Y29 109 aa5.04□□□□□ -1.6
ERCC8-205ENST00000477893 DIRC1Q969H9 104 aa5.04□□□□□ -1.6
ERCC8-205ENST00000477893 RPL37AP8A6NKH3 93 aa5.03□□□□□ -1.6
ERCC8-205ENST00000477893 H0Y9J4 135 aa5.03□□□□□ -1.6
ERCC8-205ENST00000477893 TMEM170BQ5T4T1 132 aa5.03□□□□□ -1.6
ERCC8-205ENST00000477893 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
ERCC8-205ENST00000477893 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms