RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 NRACQ8N912 160 aa3.98□□□□□ -1.77
SPTLC1-205ENST00000477888 BORCS7-ASMTA0A0B4J1R7 106 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 RAB19A4D1S5 217 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 PFDN1O60925 122 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 RPL32P62910 135 aaKnown RBP3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 FAM74A3Q4VXF1 159 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 SMIM15Q7Z3B0 74 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 ENKURQ8TC29 256 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 MBD3L1Q8WWY6 194 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 C11orf52Q96A22 123 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 SMIM12Q96EX1 92 aa3.97□□□□□ -1.77
SPTLC1-205ENST00000477888 CFC1P0CG37 223 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 FCER1GP30273 86 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 CCL20P78556 96 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 PRLHP81277 87 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 Q5BKY6 102 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 Q8NBF4 154 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 SFT2D1Q8WV19 159 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 NDUFA12Q9UI09 145 aa3.96□□□□□ -1.78
SPTLC1-205ENST00000477888 TRBV20OR9-2A0A075B6H5 130 aa3.95□□□□□ -1.78
SPTLC1-205ENST00000477888 RIGQ13278 110 aa3.95□□□□□ -1.78
SPTLC1-205ENST00000477888 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
SPTLC1-205ENST00000477888 Q8N377 158 aa3.95□□□□□ -1.78
SPTLC1-205ENST00000477888 KCNRGQ8N5I3 272 aa3.95□□□□□ -1.78
SPTLC1-205ENST00000477888 TGIF2-C20orf24A0A0A6YYL0 155 aa3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 A0A1B0GV50 99 aa3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 RAB4AP20338 218 aa3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 GNG4P50150 75 aa3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 RPL39P62891 51 aaKnown RBP3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 MRPS36P82909 103 aaKnown RBP3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
SPTLC1-205ENST00000477888 IFITM10A6NMD0 228 aa3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 HBBP68871 147 aa3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 FAM19A1Q7Z5A9 133 aa3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 BIN3Q9NQY0 253 aa3.93□□□□□ -1.78
SPTLC1-205ENST00000477888 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 CKS1BP61024 79 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 IFITM3Q01628 133 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 CBLN2Q8IUK8 224 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 SPRR4Q96PI1 79 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 GNB1LQ9BYB4 327 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 TMEM191AQ9H0A3 160 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 SPANXA1Q9NS26 97 aa3.92□□□□□ -1.78
SPTLC1-205ENST00000477888 SMKR1H3BMG3 65 aa3.91□□□□□ -1.78
SPTLC1-205ENST00000477888 SLC25A20O43772 301 aa3.91□□□□□ -1.78
SPTLC1-205ENST00000477888 FAM213BQ8TBF2 198 aa3.91□□□□□ -1.78
SPTLC1-205ENST00000477888 TMEM126AQ9H061 195 aa3.91□□□□□ -1.78
SPTLC1-205ENST00000477888 TMEM238C9JI98 176 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 F8VRH5 84 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 K7EN84 100 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 M0R378 163 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 SCO1O75880 301 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 PPP1R17O96001 155 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 UQCC3Q6UW78 93 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 AMN1Q8IY45 258 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 Q8IZM0 81 aa3.9□□□□□ -1.79
SPTLC1-205ENST00000477888 UMAD1C9J7I0 102 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 Q6ZN92 141 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 HIGD2AQ9BW72 106 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 MANBALQ9NQG1 85 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 TOMM7Q9P0U1 55 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 GNG13Q9P2W3 67 aa3.89□□□□□ -1.79
SPTLC1-205ENST00000477888 FXYD6-FXYD2A0A087WZ82 144 aa3.88□□□□□ -1.79
SPTLC1-205ENST00000477888 PPP1R2P9O14990 202 aa3.88□□□□□ -1.79
SPTLC1-205ENST00000477888 MED9Q9NWA0 146 aa3.88□□□□□ -1.79
SPTLC1-205ENST00000477888 NEBP20929 6669 aa3.88□□□□□ -1.79
SPTLC1-205ENST00000477888 TRBV24-1A0A075B6N3 115 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 A8MWL6 223 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 TCAPO15273 167 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 PDE6DO43924 150 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 LINC00299Q6ZSB3 139 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 C20orf78Q9BR46 151 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
SPTLC1-205ENST00000477888 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
SPTLC1-205ENST00000477888 ATP5LO75964 103 aa3.86□□□□□ -1.79
SPTLC1-205ENST00000477888 GIPP09681 153 aaPredicted RBP3.86□□□□□ -1.79
SPTLC1-205ENST00000477888 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
SPTLC1-205ENST00000477888 ZNF706Q9Y5V0 76 aaPredicted RBP3.86□□□□□ -1.79
SPTLC1-205ENST00000477888 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 GATCO43716 136 aaKnown RBP3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 IFI27P40305 119 aaPredicted RBP3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 LINC00483Q53H64 154 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 FAM231DQ6ZW35 169 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 MTURNQ8N3F0 131 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 S100ZQ8WXG8 99 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 BORCS7Q96B45 105 aa3.85□□□□□ -1.79
SPTLC1-205ENST00000477888 HIGD1CA8MV81 97 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms