RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 CDKN2A-AS1Q9UH64 79 aa8.85□□□□□ -0.99
PDE6D-204ENST00000477748 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
PDE6D-204ENST00000477748 LOC100996750A0A140TA64 210 aa8.83□□□□□ -1
PDE6D-204ENST00000477748 A0A1W2PNN7 141 aa8.83□□□□□ -1
PDE6D-204ENST00000477748 LINC00614P0C842 121 aa8.83□□□□□ -1
PDE6D-204ENST00000477748 TLX1NBP0CAT3 122 aa8.83□□□□□ -1
PDE6D-204ENST00000477748 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
PDE6D-204ENST00000477748 KRTAP4-6Q9BYQ5 205 aa8.83□□□□□ -1
PDE6D-204ENST00000477748 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 TINCRA0A1B0GVN0 87 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 CKS1BP61024 79 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 PMVKQ15126 192 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 C6orf226Q5I0X4 101 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 Q6ZRP5 223 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 Q8IZM0 81 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 URB1-AS1Q96HZ7 61 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 YPEL4Q96NS1 127 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 CST9LQ9H4G1 147 aa8.82□□□□□ -1
PDE6D-204ENST00000477748 RAB5BP61020 215 aa8.81□□□□□ -1
PDE6D-204ENST00000477748 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
PDE6D-204ENST00000477748 GAGE2EQ4V326 116 aa8.81□□□□□ -1
PDE6D-204ENST00000477748 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
PDE6D-204ENST00000477748 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
PDE6D-204ENST00000477748 A0A096LNJ9 63 aa8.8□□□□□ -1
PDE6D-204ENST00000477748 HBDP02042 147 aa8.8□□□□□ -1
PDE6D-204ENST00000477748 NDUFA6P56556 154 aa8.8□□□□□ -1
PDE6D-204ENST00000477748 C4orf48Q5BLP8 95 aa8.8□□□□□ -1
PDE6D-204ENST00000477748 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
PDE6D-204ENST00000477748 SLC7A5P1Q8MH63 180 aa8.8□□□□□ -1
PDE6D-204ENST00000477748 TNXBP22105 4242 aa8.79□□□□□ -1
PDE6D-204ENST00000477748 PMCHL1Q16048 86 aa8.79□□□□□ -1
PDE6D-204ENST00000477748 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
PDE6D-204ENST00000477748 SMIM1B2RUZ4 78 aa8.78□□□□□ -1
PDE6D-204ENST00000477748 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
PDE6D-204ENST00000477748 PDZD11Q5EBL8 140 aa8.78□□□□□ -1
PDE6D-204ENST00000477748 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
PDE6D-204ENST00000477748 FAM168BA1KXE4 195 aa8.77□□□□□ -1.01
PDE6D-204ENST00000477748 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
PDE6D-204ENST00000477748 F8VRH5 84 aa8.76□□□□□ -1.01
PDE6D-204ENST00000477748 H3BRM9 83 aa8.76□□□□□ -1.01
PDE6D-204ENST00000477748 ATP5LO75964 103 aa8.76□□□□□ -1.01
PDE6D-204ENST00000477748 SPINK8P0C7L1 97 aa8.76□□□□□ -1.01
PDE6D-204ENST00000477748 CXCL5P42830 114 aa8.76□□□□□ -1.01
PDE6D-204ENST00000477748 FAM19A5Q7Z5A7 132 aaPredicted RBP8.76□□□□□ -1.01
PDE6D-204ENST00000477748 COX7B2Q8TF08 81 aa8.76□□□□□ -1.01
PDE6D-204ENST00000477748 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
PDE6D-204ENST00000477748 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
PDE6D-204ENST00000477748 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
PDE6D-204ENST00000477748 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
PDE6D-204ENST00000477748 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
PDE6D-204ENST00000477748 TRGC2P03986 189 aa8.72□□□□□ -1.01
PDE6D-204ENST00000477748 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
PDE6D-204ENST00000477748 M0QXV9 152 aa8.71□□□□□ -1.02
PDE6D-204ENST00000477748 ZNF22P17026 224 aaPredicted RBP8.71□□□□□ -1.02
PDE6D-204ENST00000477748 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
PDE6D-204ENST00000477748 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.02
PDE6D-204ENST00000477748 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
PDE6D-204ENST00000477748 HSBP1O75506 76 aa8.7□□□□□ -1.02
PDE6D-204ENST00000477748 SRSF9Q13242 221 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDE6D-204ENST00000477748 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
PDE6D-204ENST00000477748 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
PDE6D-204ENST00000477748 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
PDE6D-204ENST00000477748 UBE2BP63146 152 aa8.69□□□□□ -1.02
PDE6D-204ENST00000477748 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
PDE6D-204ENST00000477748 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
PDE6D-204ENST00000477748 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
PDE6D-204ENST00000477748 REG3GQ6UW15 175 aa8.68□□□□□ -1.02
PDE6D-204ENST00000477748 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
PDE6D-204ENST00000477748 FAM19A2Q8N3H0 131 aa8.68□□□□□ -1.02
PDE6D-204ENST00000477748 COLCA2A8K830 154 aa8.67□□□□□ -1.02
PDE6D-204ENST00000477748 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
PDE6D-204ENST00000477748 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
PDE6D-204ENST00000477748 SERF1AO75920 110 aa8.65□□□□□ -1.02
PDE6D-204ENST00000477748 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
PDE6D-204ENST00000477748 LRP2P98164 4655 aa8.65□□□□□ -1.03
PDE6D-204ENST00000477748 RNF213Q63HN8 5207 aa8.65□□□□□ -1.03
PDE6D-204ENST00000477748 PFN2P35080 140 aa8.64□□□□□ -1.03
PDE6D-204ENST00000477748 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
PDE6D-204ENST00000477748 LINC00310P59036 64 aa8.63□□□□□ -1.03
PDE6D-204ENST00000477748 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
PDE6D-204ENST00000477748 H0Y8G0 127 aa8.62□□□□□ -1.03
PDE6D-204ENST00000477748 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
PDE6D-204ENST00000477748 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
PDE6D-204ENST00000477748 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
PDE6D-204ENST00000477748 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
PDE6D-204ENST00000477748 SCO1O75880 301 aa8.61□□□□□ -1.03
PDE6D-204ENST00000477748 ODF1Q14990 250 aa8.61□□□□□ -1.03
PDE6D-204ENST00000477748 SFTA2Q6UW10 78 aa8.61□□□□□ -1.03
PDE6D-204ENST00000477748 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
PDE6D-204ENST00000477748 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
PDE6D-204ENST00000477748 NUPR1O60356 82 aa8.6□□□□□ -1.03
PDE6D-204ENST00000477748 FABP4P15090 132 aa8.59□□□□□ -1.03
PDE6D-204ENST00000477748 KRTAP10-8P60410 259 aa8.59□□□□□ -1.03
PDE6D-204ENST00000477748 COX17Q14061 63 aa8.59□□□□□ -1.03
PDE6D-204ENST00000477748 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
PDE6D-204ENST00000477748 HSPB8Q9UJY1 196 aa8.59□□□□□ -1.03
PDE6D-204ENST00000477748 H0Y9J4 135 aa8.58□□□□□ -1.04
PDE6D-204ENST00000477748 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
PDE6D-204ENST00000477748 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms