RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 PRSS2P07478 247 aa14□□□□□ -0.17
SF1-214ENST00000477596 Q6ZRP5 223 aa14□□□□□ -0.17
SF1-214ENST00000477596 LRP1Q07954 4544 aaKnown RBP14□□□□□ -0.17
SF1-214ENST00000477596 FAT3Q8TDW7 4589 aa13.99□□□□□ -0.17
SF1-214ENST00000477596 DMBT1Q9UGM3 2413 aaPredicted RBP13.99□□□□□ -0.17
SF1-214ENST00000477596 NDUFA6P56556 154 aa13.99□□□□□ -0.17
SF1-214ENST00000477596 C9orf116Q5BN46 136 aaPredicted RBP13.99□□□□□ -0.17
SF1-214ENST00000477596 Q8IZM0 81 aa13.99□□□□□ -0.17
SF1-214ENST00000477596 C7orf33Q8WU49 177 aa13.99□□□□□ -0.17
SF1-214ENST00000477596 TRBV30A0A0K0K1B3 111 aa13.97□□□□□ -0.17
SF1-214ENST00000477596 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
SF1-214ENST00000477596 TLX1NBP0CAT3 122 aa13.97□□□□□ -0.17
SF1-214ENST00000477596 HERC1Q15751 4861 aa13.97□□□□□ -0.17
SF1-214ENST00000477596 GAGE2EQ4V326 116 aa13.96□□□□□ -0.17
SF1-214ENST00000477596 C6orf226Q5I0X4 101 aa13.96□□□□□ -0.17
SF1-214ENST00000477596 GAGE2DQ9UEU5 116 aa13.96□□□□□ -0.17
SF1-214ENST00000477596 FAM168BA1KXE4 195 aa13.95□□□□□ -0.18
SF1-214ENST00000477596 COLCA2A8K830 154 aa13.95□□□□□ -0.18
SF1-214ENST00000477596 IGLC3P0DOY3 106 aa13.95□□□□□ -0.18
SF1-214ENST00000477596 CKS1BP61024 79 aa13.95□□□□□ -0.18
SF1-214ENST00000477596 CHCHD1Q96BP2 118 aaKnown RBP13.95□□□□□ -0.18
SF1-214ENST00000477596 SCO1O75880 301 aa13.94□□□□□ -0.18
SF1-214ENST00000477596 ATP5LO75964 103 aa13.94□□□□□ -0.18
SF1-214ENST00000477596 PRR3P79522 188 aaKnown RBP13.93□□□□□ -0.18
SF1-214ENST00000477596 ZNF22P17026 224 aaPredicted RBP13.92□□□□□ -0.18
SF1-214ENST00000477596 LINC00310P59036 64 aa13.92□□□□□ -0.18
SF1-214ENST00000477596 BAGE3Q86Y29 109 aa13.92□□□□□ -0.18
SF1-214ENST00000477596 COX7B2Q8TF08 81 aa13.92□□□□□ -0.18
SF1-214ENST00000477596 NDUFC2-KCTD14E9PQ53 114 aa13.91□□□□□ -0.18
SF1-214ENST00000477596 PHF5AQ7RTV0 110 aaKnown RBP13.91□□□□□ -0.18
SF1-214ENST00000477596 FAM19A2Q8N3H0 131 aa13.91□□□□□ -0.18
SF1-214ENST00000477596 FAM19A5Q7Z5A7 132 aaPredicted RBP13.9□□□□□ -0.18
SF1-214ENST00000477596 C11orf86A6NJI1 115 aa13.89□□□□□ -0.19
SF1-214ENST00000477596 F8VRH5 84 aa13.89□□□□□ -0.19
SF1-214ENST00000477596 C9orf129Q5T035 196 aaKnown RBP13.89□□□□□ -0.19
SF1-214ENST00000477596 KRTAP7-1Q8IUC3 87 aa13.89□□□□□ -0.19
SF1-214ENST00000477596 KRTAP29-1A8MX34 341 aaPredicted RBP13.88□□□□□ -0.19
SF1-214ENST00000477596 H3BRM9 83 aa13.88□□□□□ -0.19
SF1-214ENST00000477596 HSBP1O75506 76 aa13.88□□□□□ -0.19
SF1-214ENST00000477596 SERF1AO75920 110 aa13.88□□□□□ -0.19
SF1-214ENST00000477596 CXCL5P42830 114 aa13.87□□□□□ -0.19
SF1-214ENST00000477596 IFI27L1Q96BM0 104 aa13.87□□□□□ -0.19
SF1-214ENST00000477596 J3QL48 77 aa13.86□□□□□ -0.19
SF1-214ENST00000477596 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
SF1-214ENST00000477596 CHTOPQ9Y3Y2 248 aaKnown RBP13.85□□□□□ -0.19
SF1-214ENST00000477596 NUPR1O60356 82 aa13.84□□□□□ -0.19
SF1-214ENST00000477596 XAGE1AQ9HD64 81 aa13.84□□□□□ -0.19
SF1-214ENST00000477596 TMEM170BQ5T4T1 132 aa13.83□□□□□ -0.2
SF1-214ENST00000477596 KRTAP11-1Q8IUC1 163 aa13.83□□□□□ -0.2
SF1-214ENST00000477596 TRAV12-1A0A0B4J245 112 aa13.81□□□□□ -0.2
SF1-214ENST00000477596 M0QXV9 152 aa13.81□□□□□ -0.2
SF1-214ENST00000477596 PSORS1C2Q9UIG4 136 aa13.81□□□□□ -0.2
SF1-214ENST00000477596 SERTAD4-AS1Q5TG53 156 aa13.8□□□□□ -0.2
SF1-214ENST00000477596 H0Y8G0 127 aa13.79□□□□□ -0.2
SF1-214ENST00000477596 OXTP01178 125 aa13.79□□□□□ -0.2
SF1-214ENST00000477596 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
SF1-214ENST00000477596 FABP4P15090 132 aa13.75□□□□□ -0.21
SF1-214ENST00000477596 ODF1Q14990 250 aa13.75□□□□□ -0.21
SF1-214ENST00000477596 C1orf137Q5JT78 98 aa13.75□□□□□ -0.21
SF1-214ENST00000477596 TMEM223A0PJW6 202 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BKO60814 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BJP06899 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BOP23527 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BBP33778 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BDP58876 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BCP62807 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST2H2BEQ16778 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BHQ93079 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BNQ99877 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 HIST1H2BMQ99879 126 aa13.74□□□□□ -0.21
SF1-214ENST00000477596 SRSF9Q13242 221 aaKnown RBP eCLIP13.73□□□□□ -0.21
SF1-214ENST00000477596 ZNF625Q96I27 306 aaPredicted RBP13.73□□□□□ -0.21
SF1-214ENST00000477596 PFN2P35080 140 aa13.72□□□□□ -0.21
SF1-214ENST00000477596 UBE2BP63146 152 aa13.72□□□□□ -0.21
SF1-214ENST00000477596 SPINK6Q6UWN8 80 aa13.71□□□□□ -0.21
SF1-214ENST00000477596 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
SF1-214ENST00000477596 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
SF1-214ENST00000477596 HSPB8Q9UJY1 196 aa13.7□□□□□ -0.22
SF1-214ENST00000477596 ERG28Q9UKR5 140 aa13.7□□□□□ -0.22
SF1-214ENST00000477596 PMCHL2Q9BQD1 86 aa13.69□□□□□ -0.22
SF1-214ENST00000477596 TNXBP22105 4242 aa13.68□□□□□ -0.22
SF1-214ENST00000477596 IGLV7-43P04211 117 aa13.66□□□□□ -0.22
SF1-214ENST00000477596 MRPL55Q7Z7F7 128 aaKnown RBP13.64□□□□□ -0.23
SF1-214ENST00000477596 SND1-IT1Q9HBX3 110 aa13.64□□□□□ -0.23
SF1-214ENST00000477596 TP73-AS1Q9UF72 201 aa13.63□□□□□ -0.23
SF1-214ENST00000477596 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
SF1-214ENST00000477596 GAGE10A6NGK3 116 aa13.62□□□□□ -0.23
SF1-214ENST00000477596 TSPEAR-AS2P59090 65 aa13.62□□□□□ -0.23
SF1-214ENST00000477596 SFTA2Q6UW10 78 aa13.62□□□□□ -0.23
SF1-214ENST00000477596 A0A0U1RRA0 63 aa13.61□□□□□ -0.23
SF1-214ENST00000477596 DPM2O94777 84 aa13.61□□□□□ -0.23
SF1-214ENST00000477596 PLNP26678 52 aa13.61□□□□□ -0.23
SF1-214ENST00000477596 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
SF1-214ENST00000477596 Q8NDZ9 215 aa13.61□□□□□ -0.23
SF1-214ENST00000477596 LINC01600Q96MT4 127 aa13.61□□□□□ -0.23
SF1-214ENST00000477596 IGLV5-37A0A075B6J1 123 aa13.6□□□□□ -0.23
SF1-214ENST00000477596 RPL37AP8A6NKH3 93 aa13.6□□□□□ -0.23
SF1-214ENST00000477596 COX17Q14061 63 aa13.6□□□□□ -0.23
SF1-214ENST00000477596 REG3GQ6UW15 175 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms