RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 COL6A5A8TX70 2615 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 H0YGX0 51 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 XGP55808 180 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 FBN2P35556 2912 aa7.85□□□□□ -1.15
COL27A1-204ENST00000477421 PRR3P79522 188 aaKnown RBP7.85□□□□□ -1.15
COL27A1-204ENST00000477421 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
COL27A1-204ENST00000477421 SPANXDQ9BXN6 97 aa7.85□□□□□ -1.15
COL27A1-204ENST00000477421 FAM236AA0A1B0GUQ0 79 aa7.84□□□□□ -1.15
COL27A1-204ENST00000477421 FAM236BA0A1B0GV22 79 aa7.84□□□□□ -1.15
COL27A1-204ENST00000477421 FHL2Q14192 279 aa7.84□□□□□ -1.15
COL27A1-204ENST00000477421 C9orf153Q5TBE3 101 aa7.84□□□□□ -1.15
COL27A1-204ENST00000477421 LYRM9A8MSI8 78 aa7.84□□□□□ -1.16
COL27A1-204ENST00000477421 H7C423 109 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 Q8N2B8 174 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 UBL5Q9BZL1 73 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 SMIM9A6NGZ8 99 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 TMEM126AQ9H061 195 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 CCL18P55774 89 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 RETNQ9HD89 108 aa7.83□□□□□ -1.16
COL27A1-204ENST00000477421 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 LST1O00453 97 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 GHRHP01286 108 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 IGHV4-30-4P0DP06 118 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 A0A096LNT2 108 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 RNF183Q96D59 192 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
COL27A1-204ENST00000477421 FSHBP01225 129 aa7.81□□□□□ -1.16
COL27A1-204ENST00000477421 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
COL27A1-204ENST00000477421 SMIM11BQ8TCY0 68 aa7.81□□□□□ -1.16
COL27A1-204ENST00000477421 TIMM17BO60830 172 aa7.8□□□□□ -1.16
COL27A1-204ENST00000477421 CSMD1Q96PZ7 3565 aa7.79□□□□□ -1.16
COL27A1-204ENST00000477421 MIFP14174 115 aa7.79□□□□□ -1.16
COL27A1-204ENST00000477421 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
COL27A1-204ENST00000477421 C11orf45Q8TAV5 145 aa7.79□□□□□ -1.16
COL27A1-204ENST00000477421 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
COL27A1-204ENST00000477421 UNQ6190/PRO20217Q6UXQ8 127 aa7.78□□□□□ -1.16
COL27A1-204ENST00000477421 CD164L2Q6UWJ8 174 aa7.78□□□□□ -1.16
COL27A1-204ENST00000477421 CXCL5P42830 114 aa7.78□□□□□ -1.16
COL27A1-204ENST00000477421 FHL3Q13643 280 aa7.78□□□□□ -1.16
COL27A1-204ENST00000477421 KPRPQ5T749 579 aaPredicted RBP7.78□□□□□ -1.16
COL27A1-204ENST00000477421 ACYP1P07311 99 aa7.77□□□□□ -1.17
COL27A1-204ENST00000477421 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
COL27A1-204ENST00000477421 SPATA25Q9BR10 227 aa7.77□□□□□ -1.17
COL27A1-204ENST00000477421 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
COL27A1-204ENST00000477421 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
COL27A1-204ENST00000477421 A0A087WZ39 114 aa7.76□□□□□ -1.17
COL27A1-204ENST00000477421 Q8N3U1 123 aa7.76□□□□□ -1.17
COL27A1-204ENST00000477421 CELSR1Q9NYQ6 3014 aa7.76□□□□□ -1.17
COL27A1-204ENST00000477421 TRACP01848 142 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 SVEP1Q4LDE5 3571 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 CYSRT1A8MQ03 144 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 NDUFV3P56181 108 aaKnown RBP7.75□□□□□ -1.17
COL27A1-204ENST00000477421 NANOS2P60321 138 aaKnown RBP7.75□□□□□ -1.17
COL27A1-204ENST00000477421 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
COL27A1-204ENST00000477421 A0A1B0GX51 115 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 UBE2BP63146 152 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 CUBNO60494 3623 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 IGKV2-24A0A0C4DH68 120 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 A8MTW9 85 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 RBM3P98179 157 aaKnown RBP7.74□□□□□ -1.17
COL27A1-204ENST00000477421 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 LINC00337Q8N6G1 96 aa7.74□□□□□ -1.17
COL27A1-204ENST00000477421 APCP25054 2843 aa7.73□□□□□ -1.17
COL27A1-204ENST00000477421 CELA1Q9UNI1 258 aa7.73□□□□□ -1.17
COL27A1-204ENST00000477421 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
COL27A1-204ENST00000477421 Q6ZTC4 211 aa7.73□□□□□ -1.17
COL27A1-204ENST00000477421 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
COL27A1-204ENST00000477421 A0A087WYN8 130 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 IGHV3OR16-9A0A0B4J2B5 98 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 TMEM256-PLSCR3K7ERE1 68 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 LELP1Q5T871 98 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 ETDCA0A1B0GVM5 59 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 F8WEM9 126 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 V9GYY9 64 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 IGLV5-39A0A0G2JS06 123 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 Q6ZQY7 126 aa7.72□□□□□ -1.17
COL27A1-204ENST00000477421 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.17
COL27A1-204ENST00000477421 A0A0J9YWU9 116 aa7.71□□□□□ -1.17
COL27A1-204ENST00000477421 IGKV2D-28P01615 120 aa7.71□□□□□ -1.17
COL27A1-204ENST00000477421 Q8IZM0 81 aa7.71□□□□□ -1.17
COL27A1-204ENST00000477421 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
COL27A1-204ENST00000477421 NSD1Q96L73 2696 aaPredicted RBP7.71□□□□□ -1.18
COL27A1-204ENST00000477421 SCXQ7RTU7 201 aa7.7□□□□□ -1.18
COL27A1-204ENST00000477421 MXRA5Q9NR99 2828 aa7.7□□□□□ -1.18
COL27A1-204ENST00000477421 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
COL27A1-204ENST00000477421 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
COL27A1-204ENST00000477421 COX7BP24311 80 aa7.69□□□□□ -1.18
COL27A1-204ENST00000477421 RMI2Q96E14 147 aa7.69□□□□□ -1.18
COL27A1-204ENST00000477421 VPREB1P12018 145 aa7.69□□□□□ -1.18
COL27A1-204ENST00000477421 WFDC10BQ8IUB3 73 aa7.69□□□□□ -1.18
COL27A1-204ENST00000477421 X6R8D5 127 aa7.68□□□□□ -1.18
COL27A1-204ENST00000477421 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
COL27A1-204ENST00000477421 LITAFQ99732 161 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms