RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SNRNP200O75643 2136 aaKnown RBP1.73□□□□□ -2.13
HMGN4-202ENST00000477243 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
HMGN4-202ENST00000477243 FREM3P0C091 2139 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 IGLV2-18A0A075B6J9 118 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 TRBV7-7A0A0K0K1E9 115 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 TRBV10-3A0A0K0K1G6 114 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 NAP1L6A6NFF2 107 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 IBA57-AS1B1ANH7 110 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 GNGT2O14610 69 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 CYB5AP00167 134 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 INSL4Q14641 139 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 RHOHQ15669 191 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 Q1T7F1 81 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 ZNF791Q3KP31 576 aaPredicted RBP1.72□□□□□ -2.13
HMGN4-202ENST00000477243 UNQ5815/PRO19632Q6UWF5 114 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 ZNF833PQ6ZTB9 187 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 Q6ZTI0 123 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 OR10AG1Q8NH19 301 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 KRTAP9-4Q9BYQ2 154 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 LHFPL6Q9Y693 200 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 R4GN34 69 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 HUWE1Q7Z6Z7 4374 aaKnown RBP1.72□□□□□ -2.13
HMGN4-202ENST00000477243 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
HMGN4-202ENST00000477243 IGKV2D-24A0A075B6R9 120 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 MUC21A0A140T8X8 626 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 NDUFC1O43677 76 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 IGKCP01834 107 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 PRB2P02812 416 aaPredicted RBP1.71□□□□□ -2.14
HMGN4-202ENST00000477243 DSCR10P59022 87 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 ELOBQ15370 118 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 PYDC2Q56P42 97 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 FAM74A1Q5RGS3 127 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 NDUFA11Q86Y39 141 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 REG4Q9BYZ8 158 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 UQCR10Q9UDW1 63 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 SMAD5-AS1Q9Y6J3 95 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 FREM1Q5H8C1 2179 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
HMGN4-202ENST00000477243 ALMS1Q8TCU4 4167 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 MPDZO75970 2070 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 NCOA6Q14686 2063 aaPredicted RBP1.7□□□□□ -2.14
HMGN4-202ENST00000477243 IGKV3D-11A0A0A0MRZ8 115 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 TRAV17A0A0B4J275 112 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 GAS8-AS1O95177 125 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 SFT2D2O95562 160 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 STATHP02808 62 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 CCKP06307 115 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 UBE2G1P62253 170 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 CCL8P80075 99 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 RBM3P98179 157 aaKnown RBP1.7□□□□□ -2.14
HMGN4-202ENST00000477243 MIR22HGQ0VDD5 57 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 PDE6HQ13956 83 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 C9orf116Q5BN46 136 aaPredicted RBP1.7□□□□□ -2.14
HMGN4-202ENST00000477243 S100A7L2Q5SY68 101 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 XP32Q5T750 250 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.7□□□□□ -2.14
HMGN4-202ENST00000477243 ZCCHC23Q6ZST2 131 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 ZNF720Q7Z2F6 126 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 LYPD1Q8N2G4 141 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 CYP4F30PQ9H0H9 118 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 PRO2289Q9P1D8 64 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 HEATR1Q9H583 2144 aaKnown RBP1.7□□□□□ -2.14
HMGN4-202ENST00000477243 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 ANK3Q12955 4377 aaKnown RBP1.7□□□□□ -2.14
HMGN4-202ENST00000477243 HEATR5BQ9P2D3 2071 aa1.7□□□□□ -2.14
HMGN4-202ENST00000477243 IGKV1D-17A0A075B6S4 117 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 TRAV13-2A0A0B4J235 113 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 A0A1W2PNM2 257 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 CRYM-AS1A6NIL9 109 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 HCRTO43612 131 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 CGAP01215 116 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 IGKV3-11P04433 115 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 SLC25A6P12236 298 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 GNG11P61952 73 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 DEFB134Q4QY38 66 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 LINC00299Q6ZSB3 139 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 CLECL1Q8IZS7 167 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 TSLPQ969D9 159 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 S100A16Q96FQ6 103 aaKnown RBP1.69□□□□□ -2.14
HMGN4-202ENST00000477243 TRGV9Q99603 122 aa1.69□□□□□ -2.14
HMGN4-202ENST00000477243 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
HMGN4-202ENST00000477243 TRAV23DV6A0A075B6W5 121 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 TRBV7-1A0A0A6YYK4 115 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 hADV29S1A0JD25 119 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 C2orf70A6NJV1 201 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 IGHV3-33P01772 117 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 CTSGP08311 255 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 HRES1P13985 223 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 HOXB6P17509 224 aaKnown RBP1.68□□□□□ -2.14
HMGN4-202ENST00000477243 SEC11AP67812 179 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 ADIRFQ15847 76 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 MPV17LQ2QL34 196 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 SPINK14Q6IE38 97 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 KRTAP26-1Q6PEX3 210 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 SERP2Q8N6R1 65 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 Q8TAT8 98 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 LINC00052Q96N35 136 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 SMCO4Q9NRQ5 59 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 ORMDL1Q9P0S3 153 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 CACFD1Q9UGQ2 172 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms