RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C6orf226Q5I0X4 101 aa14.98□□□□□ -0.01
CPNE1-223ENST00000475146 Q8IZM0 81 aa14.98□□□□□ -0.01
CPNE1-223ENST00000475146 URB1-AS1Q96HZ7 61 aa14.98□□□□□ -0.01
CPNE1-223ENST00000475146 TINCRA0A1B0GVN0 87 aa14.97□□□□□ -0.01
CPNE1-223ENST00000475146 YPEL4Q96NS1 127 aa14.96□□□□□ -0.01
CPNE1-223ENST00000475146 A0A096LNJ9 63 aa14.95□□□□□ -0.02
CPNE1-223ENST00000475146 HBDP02042 147 aa14.95□□□□□ -0.02
CPNE1-223ENST00000475146 RAB5BP61020 215 aa14.95□□□□□ -0.02
CPNE1-223ENST00000475146 PMCHL1Q16048 86 aa14.95□□□□□ -0.02
CPNE1-223ENST00000475146 HERC1Q15751 4861 aa14.94□□□□□ -0.02
CPNE1-223ENST00000475146 NDUFC2-KCTD14E9PQ53 114 aa14.94□□□□□ -0.02
CPNE1-223ENST00000475146 CBLN2Q8IUK8 224 aa14.94□□□□□ -0.02
CPNE1-223ENST00000475146 PKHD1L1Q86WI1 4243 aa14.94□□□□□ -0.02
CPNE1-223ENST00000475146 SMIM1B2RUZ4 78 aa14.93□□□□□ -0.02
CPNE1-223ENST00000475146 NDUFA6P56556 154 aa14.93□□□□□ -0.02
CPNE1-223ENST00000475146 PHF5AQ7RTV0 110 aaKnown RBP14.93□□□□□ -0.02
CPNE1-223ENST00000475146 IGLV5-45A0A087WSX0 123 aa14.92□□□□□ -0.02
CPNE1-223ENST00000475146 FAM168BA1KXE4 195 aa14.92□□□□□ -0.02
CPNE1-223ENST00000475146 FAM19A5Q7Z5A7 132 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-223ENST00000475146 SLC7A5P1Q8MH63 180 aa14.91□□□□□ -0.02
CPNE1-223ENST00000475146 SPINK8P0C7L1 97 aa14.9□□□□□ -0.02
CPNE1-223ENST00000475146 CXCL5P42830 114 aa14.9□□□□□ -0.02
CPNE1-223ENST00000475146 PDZD11Q5EBL8 140 aa14.9□□□□□ -0.02
CPNE1-223ENST00000475146 LRP1Q07954 4544 aaKnown RBP14.89□□□□□ -0.03
CPNE1-223ENST00000475146 F8VRH5 84 aa14.89□□□□□ -0.03
CPNE1-223ENST00000475146 COX7B2Q8TF08 81 aa14.88□□□□□ -0.03
CPNE1-223ENST00000475146 H3BRM9 83 aa14.87□□□□□ -0.03
CPNE1-223ENST00000475146 ATP5LO75964 103 aa14.87□□□□□ -0.03
CPNE1-223ENST00000475146 IGLC3P0DOY3 106 aa14.86□□□□□ -0.03
CPNE1-223ENST00000475146 FAT3Q8TDW7 4589 aa14.85□□□□□ -0.03
CPNE1-223ENST00000475146 C9orf129Q5T035 196 aaKnown RBP14.85□□□□□ -0.03
CPNE1-223ENST00000475146 PSORS1C2Q9UIG4 136 aa14.85□□□□□ -0.03
CPNE1-223ENST00000475146 M0QXV9 152 aa14.84□□□□□ -0.03
CPNE1-223ENST00000475146 SPINK6Q6UWN8 80 aa14.84□□□□□ -0.03
CPNE1-223ENST00000475146 CHCHD1Q96BP2 118 aaKnown RBP14.84□□□□□ -0.03
CPNE1-223ENST00000475146 C1orf137Q5JT78 98 aa14.82□□□□□ -0.04
CPNE1-223ENST00000475146 BAGE3Q86Y29 109 aa14.82□□□□□ -0.04
CPNE1-223ENST00000475146 KRTAP7-1Q8IUC3 87 aa14.82□□□□□ -0.04
CPNE1-223ENST00000475146 XAGE1AQ9HD64 81 aa14.82□□□□□ -0.04
CPNE1-223ENST00000475146 ZNF22P17026 224 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-223ENST00000475146 TRGC2P03986 189 aa14.79□□□□□ -0.04
CPNE1-223ENST00000475146 UBE2BP63146 152 aa14.79□□□□□ -0.04
CPNE1-223ENST00000475146 SRSF9Q13242 221 aaKnown RBP eCLIP14.79□□□□□ -0.04
CPNE1-223ENST00000475146 MT1HL1P0DM35 61 aa14.78□□□□□ -0.04
CPNE1-223ENST00000475146 C11orf86A6NJI1 115 aa14.77□□□□□ -0.05
CPNE1-223ENST00000475146 HSBP1O75506 76 aa14.77□□□□□ -0.05
CPNE1-223ENST00000475146 REG3GQ6UW15 175 aa14.77□□□□□ -0.05
CPNE1-223ENST00000475146 KRTAP11-1Q8IUC1 163 aa14.77□□□□□ -0.05
CPNE1-223ENST00000475146 TMEM170BQ5T4T1 132 aa14.76□□□□□ -0.05
CPNE1-223ENST00000475146 SERTAD4-AS1Q5TG53 156 aa14.76□□□□□ -0.05
CPNE1-223ENST00000475146 IFI27L1Q96BM0 104 aa14.76□□□□□ -0.05
CPNE1-223ENST00000475146 CHTOPQ9Y3Y2 248 aaKnown RBP14.76□□□□□ -0.05
CPNE1-223ENST00000475146 IGLV5-39A0A0G2JS06 123 aa14.75□□□□□ -0.05
CPNE1-223ENST00000475146 FAM19A2Q8N3H0 131 aa14.73□□□□□ -0.05
CPNE1-223ENST00000475146 LINC01600Q96MT4 127 aa14.73□□□□□ -0.05
CPNE1-223ENST00000475146 IGLV7-43P04211 117 aa14.72□□□□□ -0.05
CPNE1-223ENST00000475146 C22orf24Q9Y442 160 aa14.71□□□□□ -0.05
CPNE1-223ENST00000475146 TRAV12-1A0A0B4J245 112 aa14.7□□□□□ -0.06
CPNE1-223ENST00000475146 LBHQ53QV2 105 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-223ENST00000475146 COLCA2A8K830 154 aa14.68□□□□□ -0.06
CPNE1-223ENST00000475146 SERF1AO75920 110 aa14.68□□□□□ -0.06
CPNE1-223ENST00000475146 PFN2P35080 140 aa14.68□□□□□ -0.06
CPNE1-223ENST00000475146 H0Y8G0 127 aa14.65□□□□□ -0.06
CPNE1-223ENST00000475146 LINC00310P59036 64 aa14.65□□□□□ -0.06
CPNE1-223ENST00000475146 MRPL55Q7Z7F7 128 aaKnown RBP14.65□□□□□ -0.06
CPNE1-223ENST00000475146 DIRC1Q969H9 104 aa14.65□□□□□ -0.06
CPNE1-223ENST00000475146 ZNF625Q96I27 306 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-223ENST00000475146 TP73-AS1Q9UF72 201 aa14.65□□□□□ -0.06
CPNE1-223ENST00000475146 ERG28Q9UKR5 140 aa14.65□□□□□ -0.06
CPNE1-223ENST00000475146 LEPROTL1O95214 131 aa14.63□□□□□ -0.07
CPNE1-223ENST00000475146 SFTA2Q6UW10 78 aa14.63□□□□□ -0.07
CPNE1-223ENST00000475146 PLA2G2DQ9UNK4 145 aa14.63□□□□□ -0.07
CPNE1-223ENST00000475146 TMEM223A0PJW6 202 aa14.62□□□□□ -0.07
CPNE1-223ENST00000475146 ODF1Q14990 250 aa14.61□□□□□ -0.07
CPNE1-223ENST00000475146 SCO1O75880 301 aa14.6□□□□□ -0.07
CPNE1-223ENST00000475146 NKAPP1Q8N9T2 125 aa14.6□□□□□ -0.07
CPNE1-223ENST00000475146 GAGE10A6NGK3 116 aa14.59□□□□□ -0.07
CPNE1-223ENST00000475146 H0Y9J4 135 aa14.59□□□□□ -0.07
CPNE1-223ENST00000475146 NUPR1O60356 82 aa14.59□□□□□ -0.07
CPNE1-223ENST00000475146 COX17Q14061 63 aa14.59□□□□□ -0.07
CPNE1-223ENST00000475146 LINC00167Q96N53 147 aa14.58□□□□□ -0.08
CPNE1-223ENST00000475146 SND1-IT1Q9HBX3 110 aa14.58□□□□□ -0.08
CPNE1-223ENST00000475146 HSPB8Q9UJY1 196 aa14.58□□□□□ -0.08
CPNE1-223ENST00000475146 IGLV5-37A0A075B6J1 123 aa14.57□□□□□ -0.08
CPNE1-223ENST00000475146 RPL37AP8A6NKH3 93 aa14.57□□□□□ -0.08
CPNE1-223ENST00000475146 FABP4P15090 132 aa14.57□□□□□ -0.08
CPNE1-223ENST00000475146 KRTAP10-8P60410 259 aa14.57□□□□□ -0.08
CPNE1-223ENST00000475146 LINC00158P58513 81 aa14.54□□□□□ -0.08
CPNE1-223ENST00000475146 ZNF861PO60384 105 aa14.52□□□□□ -0.09
CPNE1-223ENST00000475146 A0A0U1RRA0 63 aa14.51□□□□□ -0.09
CPNE1-223ENST00000475146 BCE1O60756 84 aa14.51□□□□□ -0.09
CPNE1-223ENST00000475146 PLNP26678 52 aa14.51□□□□□ -0.09
CPNE1-223ENST00000475146 RPL24P83731 157 aaKnown RBP14.51□□□□□ -0.09
CPNE1-223ENST00000475146 TNXBP22105 4242 aa14.5□□□□□ -0.09
CPNE1-223ENST00000475146 VPREB1P12018 145 aa14.5□□□□□ -0.09
CPNE1-223ENST00000475146 MEIG1Q5JSS6 88 aa14.49□□□□□ -0.09
CPNE1-223ENST00000475146 PRR26Q8N8Z3 221 aa14.49□□□□□ -0.09
CPNE1-223ENST00000475146 PMCHL2Q9BQD1 86 aa14.49□□□□□ -0.09
CPNE1-223ENST00000475146 IGKV2-28A0A075B6P5 120 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BKO60814 126 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms