RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SERF2P84101 59 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 GDF5OSQ5U4N7 250 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 Q6YL49 198 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 ZNF355PQ9NSJ1 428 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 IGHV3-23P01764 117 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 KLK15Q9H2R5 256 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 U3KQK5 164 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 NACAE9PAV3 2078 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 TMEM14DPA8MWL7 114 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 SMIM1B2RUZ4 78 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 LECT2O14960 151 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 IGKV1D-33P01593 117 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 IGKV1-33P01594 117 aa4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 PRB2P02812 416 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-208ENST00000474246 TMEM14BQ9NUH8 114 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 ANKRD36A6QL64 1941 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 BPY2O14599 106 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 IFI6P09912 130 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 ZNF575Q86XF7 245 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 PCNX3Q9H6A9 2034 aa4.1□□□□□ -1.75
SMARCE1-208ENST00000474246 DMBT1Q9UGM3 2413 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 FREM1Q5H8C1 2179 aa4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 TRGV3P03979 118 aa4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 S100A3P33764 101 aa4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 IGLV3-21P80748 117 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 MOBPQ13875 183 aa4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 MUC4Q99102 2169 aa4.09□□□□□ -1.75
SMARCE1-208ENST00000474246 IGHV3-73A0A0B4J1V6 119 aa4.09□□□□□ -1.76
SMARCE1-208ENST00000474246 KLF14Q8TD94 323 aaPredicted RBP4.09□□□□□ -1.76
SMARCE1-208ENST00000474246 MYOFQ9NZM1 2061 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 TRBV30A0A0K0K1B3 111 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 IGHV1-8P0DP01 117 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 HMGA2P52926 109 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 C10orf128Q5T292 105 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 IGFL4Q6B9Z1 124 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 Q6ZTC4 211 aa4.08□□□□□ -1.76
SMARCE1-208ENST00000474246 IGHV3-15A0A0B4J1V0 119 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 SMIM27A0A1W2PRY6 76 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 H7C423 109 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 FCER1GP30273 86 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 V9GYV3 84 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 MDC1Q14676 2089 aaKnown RBP4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 PRAC2D3DTV9 90 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 CD24P25063 80 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
SMARCE1-208ENST00000474246 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 Q6ZQT0 140 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 LYZL2Q7Z4W2 148 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 S4R3C0 116 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 TRBV6-8A0A0A6YYG3 113 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 WISP3O95389 354 aaPredicted RBP4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 CLPSP04118 112 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 CYYR1Q96J86 154 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 TIMM9Q9Y5J7 89 aa4.06□□□□□ -1.76
SMARCE1-208ENST00000474246 CR1P17927 2039 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 CTXND1A0A1B0GTU2 59 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 A6NDX4 124 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 LHBP01229 141 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 IGHV1-46P01743 117 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 CFC1P0CG37 223 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 Q8N9W7 124 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
SMARCE1-208ENST00000474246 IGLV3-16A0A075B6K0 115 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 TRAV23DV6A0A075B6W5 121 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 A8MU10 97 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 IGLV2-11P01706 119 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 PSCAO43653 123 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 ARMS2P0C7Q2 107 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 DEFA4P12838 97 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 KRTAP10-2P60368 255 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 FAM27BQ5VT28 67 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 LINC01006Q8NI28 216 aa4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 RPP21Q9H633 154 aaKnown RBP4.04□□□□□ -1.76
SMARCE1-208ENST00000474246 Q6ZR03 302 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 LYSTQ99698 3801 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 ZNF407Q9C0G0 2248 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 SCN3AQ9NY46 2000 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 IGLV11-55A0A075B6I3 123 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 IGHV1-3A0A0C4DH29 117 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 TRBV7-4A0A0J9YYF1 115 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 TFF1P04155 84 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 Q8NBF4 154 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 LINC01560Q8TB33 94 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 IMMP1LQ96LU5 166 aa4.03□□□□□ -1.76
SMARCE1-208ENST00000474246 D6R8Y8 96 aa4.02□□□□□ -1.77
SMARCE1-208ENST00000474246 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
SMARCE1-208ENST00000474246 NNATQ16517 81 aa4.02□□□□□ -1.77
SMARCE1-208ENST00000474246 MUSTN1Q8IVN3 82 aa4.02□□□□□ -1.77
SMARCE1-208ENST00000474246 ZNF525Q8N782 197 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms